RNA–Protein interactions for RNA: ENST00000482632.5

SPTLC1-206, Transcript of serine palmitoyltransferase long chain base subunit 1, humanhuman

TSL 5

Gene SPTLC1, Length 837 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC1-206ENST00000482632 FOSP01100 380 aaPredicted RBP11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 COL6A1P12109 1028 aa11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 XBP1P17861 261 aa11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 CST5P28325 142 aaPredicted RBP11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 MRPS9P82933 396 aaKnown RBP11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 TRIM60Q495X7 471 aa11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 PCNX4Q63HM2 1172 aa11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 SLC39A5Q6ZMH5 540 aa11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 KLHDC9Q8NEP7 349 aa11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 BICD2Q8TD16 824 aa11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 AFG1LQ8WV93 481 aa11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 GTF3C6Q969F1 213 aa11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 IL17RAQ96F46 866 aa11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 MLXIPQ9HAP2 919 aa11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 PRKAG2Q9UGJ0 569 aa11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 LIMCH1Q9UPQ0 1083 aa11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 Q9Y3F1 56 aa11.42□□□□□ -0.58
SPTLC1-206ENST00000482632 FRMPD4Q14CM0 1322 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 A0A0U1RQG5 324 aaPredicted RBP11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 ESYT2A0FGR8 921 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 H0YGN5 161 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 PQBP1O60828 265 aaKnown RBP11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 STAM2O75886 525 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 UBA1P22314 1058 aaKnown RBP11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 PSMC6P62333 389 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 AP3B2Q13367 1082 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 FAM47CQ5HY64 1035 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 KCNV1Q6PIU1 500 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 WASF1Q92558 559 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 SPATA33Q96N06 139 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 TBC1D32Q96NH3 1257 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 KIF2CQ99661 725 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 ALG1Q9BT22 464 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 BACH2Q9BYV9 841 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 ZMYND12Q9H0C1 365 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 POLR3EQ9NVU0 708 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 DDX41Q9UJV9 622 aaKnown RBP11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 KCNJ14Q9UNX9 436 aa11.41□□□□□ -0.58
SPTLC1-206ENST00000482632 STK36Q9NRP7 1315 aa11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 KAT6AQ92794 2004 aa11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 NOP56O00567 594 aaKnown RBP11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 ADAMTS3O15072 1205 aa11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 CTAGE5O15320 804 aa11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 FIBPO43427 364 aa11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 JAK2O60674 1132 aa11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 RGS20O76081 388 aa11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 EMP3P54852 163 aa11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 TRIM29Q14134 588 aa11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 XRRA1Q6P2D8 792 aa11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 CCDC62Q6P9F0 684 aa11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 CYFIP1Q7L576 1253 aa11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 PPP1R13LQ8WUF5 828 aa11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 ZSCAN31Q96LW9 406 aaPredicted RBP11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 UIMC1Q96RL1 719 aa11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 SH3GLB2Q9NR46 395 aa11.4□□□□□ -0.58
SPTLC1-206ENST00000482632 DCDC2CA8MYV0 355 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 CABYRO75952 493 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 CTDNEP1O95476 244 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 MMP3P08254 477 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 ZNF286BP0CG31 522 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 CLK2P49760 499 aaKnown RBP11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 ARHGAP4P98171 946 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 TLE2Q04725 743 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 ARHGAP1Q07960 439 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 MTMR1Q13613 665 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 LAMC2Q13753 1193 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 NEDD9Q14511 834 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 DGKDQ16760 1214 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 CELF3Q5SZQ8 465 aaKnown RBP11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 MCTP2Q6DN12 878 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 CCSAPQ6IQ19 270 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 BLIDQ8IZY5 108 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 FAM184AQ8NB25 1140 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 NSUN7Q8NE18 718 aaKnown RBP11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 GPRASP2Q96D09 838 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 CDHR1Q96JP9 859 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 INPP4AQ96PE3 977 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 MTG1Q9BT17 334 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 BRMS1Q9HCU9 246 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 SH2B1Q9NRF2 756 aaPredicted RBP11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 PCDHA4Q9UN74 947 aa11.39□□□□□ -0.59
SPTLC1-206ENST00000482632 ELP1O95163 1332 aa11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 MROH7Q68CQ1 1323 aa11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 DDX39AO00148 427 aaKnown RBP11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 ARVCFO00192 962 aa11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 TLR3O15455 904 aaKnown RBP11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 TGFB3P10600 412 aa11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 SREBF1P36956 1147 aa11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 PURAQ00577 322 aaKnown RBP11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 SP2Q02086 613 aa11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 GUCY1B3Q02153 619 aa11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 SEMA3FQ13275 785 aa11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 ITGA7Q13683 1181 aa11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 UTP14CQ5TAP6 766 aaKnown RBP11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 PLA2G4DQ86XP0 818 aa11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 MXRA8Q9BRK3 442 aa11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 BCAS3Q9H6U6 928 aa11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 JADE2Q9NQC1 790 aa11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 GJB4Q9NTQ9 266 aa11.38□□□□□ -0.59
SPTLC1-206ENST00000482632 TCEAL9Q9UHQ7 104 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms