RNA–Protein interactions for RNA: ENST00000482563.1

RBM39-233, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 1,737 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-233ENST00000482563 GGA3Q9NZ52 723 aa8.62□□□□□ -1.03
RBM39-233ENST00000482563 TUBD1Q9UJT1 453 aa8.62□□□□□ -1.03
RBM39-233ENST00000482563 FBXO10Q9UK96 956 aa8.62□□□□□ -1.03
RBM39-233ENST00000482563 GPR55Q9Y2T6 319 aaPredicted RBP8.62□□□□□ -1.03
RBM39-233ENST00000482563 COL17A1Q9UMD9 1497 aaPredicted RBP8.61□□□□□ -1.03
RBM39-233ENST00000482563 ITGA4P13612 1032 aa8.61□□□□□ -1.03
RBM39-233ENST00000482563 RAD52P43351 418 aa8.61□□□□□ -1.03
RBM39-233ENST00000482563 PPP2R5DQ14738 602 aa8.61□□□□□ -1.03
RBM39-233ENST00000482563 POU4F3Q15319 338 aa8.61□□□□□ -1.03
RBM39-233ENST00000482563 NBPF12Q5TAG4 269 aaPredicted RBP8.61□□□□□ -1.03
RBM39-233ENST00000482563 ZSCAN30Q86W11 494 aa8.61□□□□□ -1.03
RBM39-233ENST00000482563 CAMKK1Q8N5S9 505 aa8.61□□□□□ -1.03
RBM39-233ENST00000482563 TRIM63Q969Q1 353 aa8.61□□□□□ -1.03
RBM39-233ENST00000482563 CORO1BQ9BR76 489 aa8.61□□□□□ -1.03
RBM39-233ENST00000482563 ZNF277Q9NRM2 450 aaPredicted RBP8.61□□□□□ -1.03
RBM39-233ENST00000482563 IFT80Q9P2H3 777 aaPredicted RBP8.61□□□□□ -1.03
RBM39-233ENST00000482563 TISP43B9A030 160 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 B9A039 149 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 VAMP4O75379 141 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 GPR85P60893 370 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 FOXC1Q12948 553 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 TAF11Q15544 211 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 CLEC16AQ2KHT3 1053 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 ANO4Q32M45 955 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 ZBTB37Q5TC79 503 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 PRR18Q8N4B5 295 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 C1GALT1C1Q96EU7 318 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 SEC62Q99442 399 aaKnown RBP8.6□□□□□ -1.03
RBM39-233ENST00000482563 SLC26A6Q9BXS9 759 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 NOL6Q9H6R4 1146 aaKnown RBP8.6□□□□□ -1.03
RBM39-233ENST00000482563 NAGPAQ9UK23 515 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 NPFFR2Q9Y5X5 522 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 ALDH2P05091 517 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 BMP2P12643 396 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 NAT1P18440 290 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 AGXTP21549 392 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 GRK2P25098 689 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 POLD1P28340 1107 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 C6orf118Q5T5N4 469 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 IZUMO3Q5VZ72 239 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 USP45Q70EL2 814 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 VWA5B2Q8N398 1253 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 VWCEQ96DN2 955 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 SLC2A13Q96QE2 648 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 BARD1Q99728 777 aaKnown RBP8.6□□□□□ -1.03
RBM39-233ENST00000482563 TTLL2Q9BWV7 592 aa8.6□□□□□ -1.03
RBM39-233ENST00000482563 SENP3-EIF4A1A0A087X0R7 540 aa8.59□□□□□ -1.03
RBM39-233ENST00000482563 EIF3FO00303 357 aaPredicted RBP8.59□□□□□ -1.03
RBM39-233ENST00000482563 CYP11A1P05108 521 aa8.59□□□□□ -1.03
RBM39-233ENST00000482563 CPB1P15086 417 aa8.59□□□□□ -1.03
RBM39-233ENST00000482563 PDCP20941 246 aa8.59□□□□□ -1.03
RBM39-233ENST00000482563 SLC19A1P41440 591 aa8.59□□□□□ -1.03
RBM39-233ENST00000482563 SMAD3P84022 425 aaKnown RBP8.59□□□□□ -1.03
RBM39-233ENST00000482563 ALDH6A1Q02252 535 aaKnown RBP8.59□□□□□ -1.03
RBM39-233ENST00000482563 LBRQ14739 615 aaKnown RBP8.59□□□□□ -1.03
RBM39-233ENST00000482563 SMAD2Q15796 467 aaKnown RBP8.59□□□□□ -1.03
RBM39-233ENST00000482563 SLC45A4Q5BKX6 768 aa8.59□□□□□ -1.03
RBM39-233ENST00000482563 FAM209BQ5JX69 171 aa8.59□□□□□ -1.03
RBM39-233ENST00000482563 SPATA1Q5VX52 437 aa8.59□□□□□ -1.03
RBM39-233ENST00000482563 PPP1R13LQ8WUF5 828 aa8.59□□□□□ -1.03
RBM39-233ENST00000482563 NUP62CLQ9H1M0 184 aa8.59□□□□□ -1.03
RBM39-233ENST00000482563 GRHPRQ9UBQ7 328 aa8.59□□□□□ -1.03
RBM39-233ENST00000482563 TMEFF2Q9UIK5 374 aaPredicted RBP8.59□□□□□ -1.03
RBM39-233ENST00000482563 PCDHGB2Q9Y5G2 931 aa8.59□□□□□ -1.03
RBM39-233ENST00000482563 DHRS4L1P0CG22 281 aa8.58□□□□□ -1.04
RBM39-233ENST00000482563 SMPD1P17405 629 aa8.58□□□□□ -1.04
RBM39-233ENST00000482563 ITGA6P23229 1130 aa8.58□□□□□ -1.04
RBM39-233ENST00000482563 CDC25BP30305 580 aa8.58□□□□□ -1.04
RBM39-233ENST00000482563 AGFG1P52594 562 aaKnown RBP8.58□□□□□ -1.04
RBM39-233ENST00000482563 PHC1P78364 1004 aa8.58□□□□□ -1.04
RBM39-233ENST00000482563 BLMHQ13867 455 aa8.58□□□□□ -1.04
RBM39-233ENST00000482563 CNN3Q15417 329 aaKnown RBP8.58□□□□□ -1.04
RBM39-233ENST00000482563 OTOP1Q7RTM1 612 aa8.58□□□□□ -1.04
RBM39-233ENST00000482563 UBE3DQ7Z6J8 389 aa8.58□□□□□ -1.04
RBM39-233ENST00000482563 MAP4K3Q8IVH8 894 aa8.58□□□□□ -1.04
RBM39-233ENST00000482563 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.58□□□□□ -1.049e-65■■■■■ 26.8
RBM39-233ENST00000482563 CYB5D2Q8WUJ1 264 aa8.58□□□□□ -1.04
RBM39-233ENST00000482563 ZFYVE21Q9BQ24 234 aa8.58□□□□□ -1.04
RBM39-233ENST00000482563 SMG9Q9H0W8 520 aaKnown RBP8.58□□□□□ -1.04
RBM39-233ENST00000482563 ANKEF1Q9NU02 776 aa8.58□□□□□ -1.04
RBM39-233ENST00000482563 TTLL8A6PVC2 850 aa8.57□□□□□ -1.04
RBM39-233ENST00000482563 MTNR1BP49286 362 aa8.57□□□□□ -1.04
RBM39-233ENST00000482563 SRSF2Q01130 221 aaKnown RBP8.57□□□□□ -1.04
RBM39-233ENST00000482563 ICA1Q05084 483 aa8.57□□□□□ -1.04
RBM39-233ENST00000482563 PDE3AQ14432 1141 aa8.57□□□□□ -1.04
RBM39-233ENST00000482563 SPRYD7Q5W111 196 aa8.57□□□□□ -1.04
RBM39-233ENST00000482563 FASTKD5Q7L8L6 764 aaKnown RBP8.57□□□□□ -1.04
RBM39-233ENST00000482563 CISD2Q8N5K1 135 aaKnown RBP8.57□□□□□ -1.04
RBM39-233ENST00000482563 SLC30A5Q8TAD4 765 aa8.57□□□□□ -1.04
RBM39-233ENST00000482563 HDAC2Q92769 488 aaKnown RBP8.57□□□□□ -1.04
RBM39-233ENST00000482563 HPS1Q92902 700 aa8.57□□□□□ -1.04
RBM39-233ENST00000482563 ARL8AQ96BM9 186 aa8.57□□□□□ -1.04
RBM39-233ENST00000482563 ABHD17AQ96GS6 310 aa8.57□□□□□ -1.04
RBM39-233ENST00000482563 MCMBPQ9BTE3 642 aa8.57□□□□□ -1.04
RBM39-233ENST00000482563 ZDHHC5Q9C0B5 715 aa8.57□□□□□ -1.04
RBM39-233ENST00000482563 CWC25Q9NXE8 425 aaPredicted RBP8.57□□□□□ -1.04
RBM39-233ENST00000482563 CORO2BQ9UQ03 480 aa8.57□□□□□ -1.04
RBM39-233ENST00000482563 NOC2LQ9Y3T9 749 aaKnown RBP8.57□□□□□ -1.04
RBM39-233ENST00000482563 FHOD1Q9Y613 1164 aa8.57□□□□□ -1.04
RBM39-233ENST00000482563 CCDC66A2RUB6 948 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms