RNA–Protein interactions for RNA: ENST00000482519.1

VAMP4-204, Transcript of vesicle associated membrane protein 4, humanhuman

TSL 3

Gene VAMP4, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP4-204ENST00000482519 RETREG2Q8NC44 543 aa18.93■□□□□ 0.62
VAMP4-204ENST00000482519 GIMAP8Q8ND71 665 aaPredicted RBP18.93■□□□□ 0.62
VAMP4-204ENST00000482519 SENP7Q9BQF6 1050 aa18.93■□□□□ 0.62
VAMP4-204ENST00000482519 RNF26Q9BY78 433 aaPredicted RBP18.93■□□□□ 0.62
VAMP4-204ENST00000482519 WNT8AQ9H1J5 351 aa18.93■□□□□ 0.62
VAMP4-204ENST00000482519 IL23AQ9NPF7 189 aa18.93■□□□□ 0.62
VAMP4-204ENST00000482519 JADE2Q9NQC1 790 aa18.93■□□□□ 0.62
VAMP4-204ENST00000482519 TELO2Q9Y4R8 837 aa18.93■□□□□ 0.62
VAMP4-204ENST00000482519 UBIAD1Q9Y5Z9 338 aa18.93■□□□□ 0.62
VAMP4-204ENST00000482519 LGALS2P05162 132 aa18.92■□□□□ 0.62
VAMP4-204ENST00000482519 HOXD8P13378 290 aaPredicted RBP18.92■□□□□ 0.62
VAMP4-204ENST00000482519 AP3B2Q13367 1082 aa18.92■□□□□ 0.62
VAMP4-204ENST00000482519 ZNF365Q70YC5 407 aa18.92■□□□□ 0.62
VAMP4-204ENST00000482519 Q7L0L9 218 aa18.92■□□□□ 0.62
VAMP4-204ENST00000482519 TEX2Q8IWB9 1127 aa18.92■□□□□ 0.62
VAMP4-204ENST00000482519 CYP2W1Q8TAV3 490 aa18.92■□□□□ 0.62
VAMP4-204ENST00000482519 GPR20Q99678 358 aa18.92■□□□□ 0.62
VAMP4-204ENST00000482519 C16orf70Q9BSU1 422 aa18.92■□□□□ 0.62
VAMP4-204ENST00000482519 VPS54Q9P1Q0 977 aa18.92■□□□□ 0.62
VAMP4-204ENST00000482519 GTF2IRD1Q9UHL9 959 aa18.92■□□□□ 0.62
VAMP4-204ENST00000482519 LAMA2P24043 3122 aaKnown RBP18.91■□□□□ 0.62
VAMP4-204ENST00000482519 H3BRB1 525 aa18.91■□□□□ 0.62
VAMP4-204ENST00000482519 HAS3O00219 553 aa18.91■□□□□ 0.62
VAMP4-204ENST00000482519 KCNA2P16389 499 aa18.91■□□□□ 0.62
VAMP4-204ENST00000482519 GNA11P29992 359 aa18.91■□□□□ 0.62
VAMP4-204ENST00000482519 CLK2P49760 499 aaKnown RBP18.91■□□□□ 0.62
VAMP4-204ENST00000482519 BFSP2Q13515 415 aa18.91■□□□□ 0.62
VAMP4-204ENST00000482519 TMEM240Q5SV17 173 aa18.91■□□□□ 0.62
VAMP4-204ENST00000482519 PSRC1Q6PGN9 363 aaPredicted RBP18.91■□□□□ 0.62
VAMP4-204ENST00000482519 CPLX2Q6PUV4 134 aaKnown RBP18.91■□□□□ 0.62
VAMP4-204ENST00000482519 DEFB128Q7Z7B8 93 aa18.91■□□□□ 0.62
VAMP4-204ENST00000482519 SESTD1Q86VW0 696 aa18.91■□□□□ 0.62
VAMP4-204ENST00000482519 REXO1Q8N1G1 1221 aaKnown RBP18.91■□□□□ 0.62
VAMP4-204ENST00000482519 DEFB123Q8N688 67 aa18.91■□□□□ 0.62
VAMP4-204ENST00000482519 MXRA8Q9BRK3 442 aa18.91■□□□□ 0.62
VAMP4-204ENST00000482519 ZMYND12Q9H0C1 365 aa18.91■□□□□ 0.62
VAMP4-204ENST00000482519 SLKQ9H2G2 1235 aaPredicted RBP18.91■□□□□ 0.62
VAMP4-204ENST00000482519 TUT1Q9H6E5 874 aaKnown RBP18.91■□□□□ 0.62
VAMP4-204ENST00000482519 ESYT2A0FGR8 921 aa18.9■□□□□ 0.62
VAMP4-204ENST00000482519 ADAMTS3O15072 1205 aa18.9■□□□□ 0.62
VAMP4-204ENST00000482519 FGBP02675 491 aa18.9■□□□□ 0.62
VAMP4-204ENST00000482519 SREBF1P36956 1147 aa18.9■□□□□ 0.62
VAMP4-204ENST00000482519 ZNF200P98182 395 aaPredicted RBP18.9■□□□□ 0.62
VAMP4-204ENST00000482519 CEP55Q53EZ4 464 aa18.9■□□□□ 0.62
VAMP4-204ENST00000482519 TRIM50Q86XT4 487 aa18.9■□□□□ 0.62
VAMP4-204ENST00000482519 RPUSD2Q8IZ73 545 aaKnown RBP18.9■□□□□ 0.62
VAMP4-204ENST00000482519 CCDC155Q8N6L0 562 aa18.9■□□□□ 0.62
VAMP4-204ENST00000482519 CCDC148Q8NFR7 591 aa18.9■□□□□ 0.62
VAMP4-204ENST00000482519 KCNH7Q9NS40 1196 aa18.9■□□□□ 0.62
VAMP4-204ENST00000482519 TPCN1Q9ULQ1 816 aa18.9■□□□□ 0.62
VAMP4-204ENST00000482519 MAFGO15525 162 aa18.89■□□□□ 0.61
VAMP4-204ENST00000482519 ARP10275 920 aa18.89■□□□□ 0.61
VAMP4-204ENST00000482519 AK2P54819 239 aa18.89■□□□□ 0.61
VAMP4-204ENST00000482519 NLRP5P59047 1200 aa18.89■□□□□ 0.61
VAMP4-204ENST00000482519 ARHGAP4P98171 946 aa18.89■□□□□ 0.61
VAMP4-204ENST00000482519 OTOP2Q7RTS6 562 aa18.89■□□□□ 0.61
VAMP4-204ENST00000482519 BICD2Q8TD16 824 aa18.89■□□□□ 0.61
VAMP4-204ENST00000482519 RASGRP4Q8TDF6 673 aa18.89■□□□□ 0.61
VAMP4-204ENST00000482519 ZNF215Q9UL58 517 aaPredicted RBP18.89■□□□□ 0.61
VAMP4-204ENST00000482519 TRIP12Q14669 1992 aaPredicted RBP18.88■□□□□ 0.61
VAMP4-204ENST00000482519 PITPNM1O00562 1244 aa18.88■□□□□ 0.61
VAMP4-204ENST00000482519 IQCF3P0C7M6 154 aa18.88■□□□□ 0.61
VAMP4-204ENST00000482519 SMIM10L2AP0DMW4 78 aa18.88■□□□□ 0.61
VAMP4-204ENST00000482519 SMIM10L2BP0DMW5 78 aa18.88■□□□□ 0.61
VAMP4-204ENST00000482519 TCF7P36402 384 aaPredicted RBP18.88■□□□□ 0.61
VAMP4-204ENST00000482519 SCRN1Q12765 414 aa18.88■□□□□ 0.61
VAMP4-204ENST00000482519 ANKRD1Q15327 319 aa18.88■□□□□ 0.61
VAMP4-204ENST00000482519 GPR153Q6NV75 609 aa18.88■□□□□ 0.61
VAMP4-204ENST00000482519 FAM161BQ96MY7 647 aa18.88■□□□□ 0.61
VAMP4-204ENST00000482519 UIMC1Q96RL1 719 aa18.88■□□□□ 0.61
VAMP4-204ENST00000482519 CTAGE1Q96RT6 745 aa18.88■□□□□ 0.61
VAMP4-204ENST00000482519 SDF4Q9BRK5 362 aa18.88■□□□□ 0.61
VAMP4-204ENST00000482519 JPH1Q9HDC5 661 aaPredicted RBP18.88■□□□□ 0.61
VAMP4-204ENST00000482519 C17orf102A2RUQ5 167 aa18.87■□□□□ 0.61
VAMP4-204ENST00000482519 DTNBO60941 627 aa18.87■□□□□ 0.61
VAMP4-204ENST00000482519 CDKL5O76039 1030 aa18.87■□□□□ 0.61
VAMP4-204ENST00000482519 DEXIO95424 95 aa18.87■□□□□ 0.61
VAMP4-204ENST00000482519 NEK4P51957 841 aa18.87■□□□□ 0.61
VAMP4-204ENST00000482519 SMAD3P84022 425 aaKnown RBP18.87■□□□□ 0.61
VAMP4-204ENST00000482519 SCN5AQ14524 2016 aa18.87■□□□□ 0.61
VAMP4-204ENST00000482519 HIC1Q14526 733 aa18.87■□□□□ 0.61
VAMP4-204ENST00000482519 MCTP2Q6DN12 878 aa18.87■□□□□ 0.61
VAMP4-204ENST00000482519 CAGE1Q8TC20 777 aa18.87■□□□□ 0.61
VAMP4-204ENST00000482519 SEPT1Q8WYJ6 367 aa18.87■□□□□ 0.61
VAMP4-204ENST00000482519 GLG1Q92896 1179 aa18.87■□□□□ 0.61
VAMP4-204ENST00000482519 ATP6V0A1Q93050 837 aa18.87■□□□□ 0.61
VAMP4-204ENST00000482519 FTOQ9C0B1 505 aaKnown RBP eCLIP18.87■□□□□ 0.61
VAMP4-204ENST00000482519 AGO4Q9HCK5 861 aaKnown RBP18.87■□□□□ 0.61
VAMP4-204ENST00000482519 SH3GLB2Q9NR46 395 aa18.87■□□□□ 0.61
VAMP4-204ENST00000482519 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.86■□□□□ 0.61
VAMP4-204ENST00000482519 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.86■□□□□ 0.61
VAMP4-204ENST00000482519 GSTTP1A0A1W2PQM5 241 aa18.86■□□□□ 0.61
VAMP4-204ENST00000482519 ZBBXA8MT70 800 aa18.86■□□□□ 0.61
VAMP4-204ENST00000482519 FAM86B1E9PN63 330 aa18.86■□□□□ 0.61
VAMP4-204ENST00000482519 MEIS1O00470 390 aa18.86■□□□□ 0.61
VAMP4-204ENST00000482519 PFKFB2O60825 505 aa18.86■□□□□ 0.61
VAMP4-204ENST00000482519 FAM86B2P0C5J1 330 aa18.86■□□□□ 0.61
VAMP4-204ENST00000482519 MARK3P27448 753 aa18.86■□□□□ 0.61
VAMP4-204ENST00000482519 PTK7Q13308 1070 aa18.86■□□□□ 0.61
VAMP4-204ENST00000482519 FAM109BQ6ICB4 259 aaPredicted RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms