RNA–Protein interactions for RNA: ENST00000481929.5

HDAC6-224, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 591 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-224ENST00000481929 ADAM15Q13444 863 aa17.48■□□□□ 0.39
HDAC6-224ENST00000481929 CDC37Q16543 378 aaPredicted RBP17.48■□□□□ 0.39
HDAC6-224ENST00000481929 HSDL1Q3SXM5 330 aa17.48■□□□□ 0.39
HDAC6-224ENST00000481929 MYSM1Q5VVJ2 828 aa17.48■□□□□ 0.39
HDAC6-224ENST00000481929 MYH7BA7E2Y1 1941 aa17.47■□□□□ 0.39
HDAC6-224ENST00000481929 LOC730098B7Z3J9 87 aa17.47■□□□□ 0.39
HDAC6-224ENST00000481929 TREHO43280 583 aa17.47■□□□□ 0.39
HDAC6-224ENST00000481929 SORBS3O60504 671 aa17.47■□□□□ 0.39
HDAC6-224ENST00000481929 GGPS1O95749 300 aa17.47■□□□□ 0.39
HDAC6-224ENST00000481929 MMP1P03956 469 aa17.47■□□□□ 0.39
HDAC6-224ENST00000481929 LINC00271P0C7V0 271 aa17.47■□□□□ 0.39
HDAC6-224ENST00000481929 GOLGA8HP0CJ92 632 aa17.47■□□□□ 0.39
HDAC6-224ENST00000481929 HNRNPUQ00839 825 aaKnown RBP eCLIP17.47■□□□□ 0.39
HDAC6-224ENST00000481929 SIGLEC14Q08ET2 396 aa17.47■□□□□ 0.39
HDAC6-224ENST00000481929 CELF3Q5SZQ8 465 aaKnown RBP17.47■□□□□ 0.39
HDAC6-224ENST00000481929 MSLNLQ96KJ4 702 aa17.47■□□□□ 0.39
HDAC6-224ENST00000481929 TTC14Q96N46 770 aa17.47■□□□□ 0.39
HDAC6-224ENST00000481929 C16orf70Q9BSU1 422 aa17.47■□□□□ 0.39
HDAC6-224ENST00000481929 OSBPL7Q9BZF2 842 aa17.47■□□□□ 0.39
HDAC6-224ENST00000481929 UBA5Q9GZZ9 404 aa17.47■□□□□ 0.39
HDAC6-224ENST00000481929 PXMP2Q9NR77 195 aa17.47■□□□□ 0.39
HDAC6-224ENST00000481929 TTC41PQ6P2S7 1318 aa17.47■□□□□ 0.39
HDAC6-224ENST00000481929 SMIM10L2AP0DMW4 78 aa17.46■□□□□ 0.39
HDAC6-224ENST00000481929 SMIM10L2BP0DMW5 78 aa17.46■□□□□ 0.39
HDAC6-224ENST00000481929 HOXC8P31273 242 aa17.46■□□□□ 0.39
HDAC6-224ENST00000481929 CBX2Q14781 532 aaPredicted RBP17.46■□□□□ 0.39
HDAC6-224ENST00000481929 VPS53Q5VIR6 699 aa17.46■□□□□ 0.39
HDAC6-224ENST00000481929 KCNV1Q6PIU1 500 aa17.46■□□□□ 0.39
HDAC6-224ENST00000481929 SMRP1Q8NCR6 262 aa17.46■□□□□ 0.39
HDAC6-224ENST00000481929 CLP1Q92989 425 aaKnown RBP17.46■□□□□ 0.39
HDAC6-224ENST00000481929 CPVLQ9H3G5 476 aa17.46■□□□□ 0.39
HDAC6-224ENST00000481929 ALG13Q9NP73 1137 aaKnown RBP17.46■□□□□ 0.39
HDAC6-224ENST00000481929 MRPL11Q9Y3B7 192 aaKnown RBP17.46■□□□□ 0.39
HDAC6-224ENST00000481929 RIF1Q5UIP0 2472 aaKnown RBP17.46■□□□□ 0.39
HDAC6-224ENST00000481929 H3BRB1 525 aa17.45■□□□□ 0.38
HDAC6-224ENST00000481929 HSPD1P10809 573 aaKnown RBP17.45■□□□□ 0.38
HDAC6-224ENST00000481929 VCPP55072 806 aaKnown RBP17.45■□□□□ 0.38
HDAC6-224ENST00000481929 ALX1Q15699 326 aa17.45■□□□□ 0.38
HDAC6-224ENST00000481929 PLVAPQ9BX97 442 aa17.45■□□□□ 0.38
HDAC6-224ENST00000481929 RNPEPQ9H4A4 650 aa17.45■□□□□ 0.38
HDAC6-224ENST00000481929 TUT1Q9H6E5 874 aaKnown RBP17.45■□□□□ 0.38
HDAC6-224ENST00000481929 CCDC171Q6TFL3 1326 aa17.45■□□□□ 0.38
HDAC6-224ENST00000481929 CFBP00751 764 aa17.44■□□□□ 0.38
HDAC6-224ENST00000481929 GNAT1P11488 350 aa17.44■□□□□ 0.38
HDAC6-224ENST00000481929 MYCLP12524 364 aaPredicted RBP17.44■□□□□ 0.38
HDAC6-224ENST00000481929 AVPR2P30518 371 aa17.44■□□□□ 0.38
HDAC6-224ENST00000481929 RRP1P56182 461 aaKnown RBP17.44■□□□□ 0.38
HDAC6-224ENST00000481929 COASYQ13057 564 aa17.44■□□□□ 0.38
HDAC6-224ENST00000481929 BTG3Q14201 252 aaPredicted RBP17.44■□□□□ 0.38
HDAC6-224ENST00000481929 MIER1Q8N108 512 aa17.44■□□□□ 0.38
HDAC6-224ENST00000481929 EFHBQ8N7U6 833 aa17.44■□□□□ 0.38
HDAC6-224ENST00000481929 PI4K2BQ8TCG2 481 aa17.44■□□□□ 0.38
HDAC6-224ENST00000481929 MLXIPQ9HAP2 919 aa17.44■□□□□ 0.38
HDAC6-224ENST00000481929 RC3H2Q9HBD1 1191 aaKnown RBP17.44■□□□□ 0.38
HDAC6-224ENST00000481929 CLEC1BQ9P126 229 aa17.44■□□□□ 0.38
HDAC6-224ENST00000481929 RGS20O76081 388 aa17.43■□□□□ 0.38
HDAC6-224ENST00000481929 LGALS2P05162 132 aa17.43■□□□□ 0.38
HDAC6-224ENST00000481929 UBA1P22314 1058 aaKnown RBP17.43■□□□□ 0.38
HDAC6-224ENST00000481929 QRICH1Q2TAL8 776 aa17.43■□□□□ 0.38
HDAC6-224ENST00000481929 ADGRF4Q8IZF3 695 aa17.43■□□□□ 0.38
HDAC6-224ENST00000481929 ASIC4Q96FT7 647 aa17.43■□□□□ 0.38
HDAC6-224ENST00000481929 PHF7Q9BWX1 381 aaPredicted RBP17.43■□□□□ 0.38
HDAC6-224ENST00000481929 DCTPP1Q9H773 170 aa17.43■□□□□ 0.38
HDAC6-224ENST00000481929 PLAGL2Q9UPG8 496 aa17.43■□□□□ 0.38
HDAC6-224ENST00000481929 USP15Q9Y4E8 981 aaPredicted RBP17.43■□□□□ 0.38
HDAC6-224ENST00000481929 FAM186AA6NE01 2351 aa17.43■□□□□ 0.38
HDAC6-224ENST00000481929 H0Y858 1186 aa17.42■□□□□ 0.38
HDAC6-224ENST00000481929 DHX16O60231 1041 aaKnown RBP17.42■□□□□ 0.38
HDAC6-224ENST00000481929 TGFB3P10600 412 aa17.42■□□□□ 0.38
HDAC6-224ENST00000481929 CAMK1Q14012 370 aa17.42■□□□□ 0.38
HDAC6-224ENST00000481929 FAM26DQ5JW98 314 aa17.42■□□□□ 0.38
HDAC6-224ENST00000481929 P2RX5Q93086 422 aa17.42■□□□□ 0.38
HDAC6-224ENST00000481929 RPGRIP1Q96KN7 1286 aa17.42■□□□□ 0.38
HDAC6-224ENST00000481929 PDCD2LQ9BRP1 358 aa17.42■□□□□ 0.38
HDAC6-224ENST00000481929 TLR9Q9NR96 1032 aa17.42■□□□□ 0.38
HDAC6-224ENST00000481929 SETD4Q9NVD3 440 aa17.42■□□□□ 0.38
HDAC6-224ENST00000481929 PROB1E7EW31 1015 aa17.41■□□□□ 0.38
HDAC6-224ENST00000481929 NOP56O00567 594 aaKnown RBP17.41■□□□□ 0.38
HDAC6-224ENST00000481929 FGAP02671 866 aa17.41■□□□□ 0.38
HDAC6-224ENST00000481929 GHRP10912 638 aa17.41■□□□□ 0.38
HDAC6-224ENST00000481929 NUBP1P53384 320 aa17.41■□□□□ 0.38
HDAC6-224ENST00000481929 SP2Q02086 613 aa17.41■□□□□ 0.38
HDAC6-224ENST00000481929 NAALADL2Q58DX5 795 aa17.41■□□□□ 0.38
HDAC6-224ENST00000481929 ADGRD2Q7Z7M1 963 aa17.41■□□□□ 0.38
HDAC6-224ENST00000481929 ZNF689Q96CS4 500 aaPredicted RBP17.41■□□□□ 0.38
HDAC6-224ENST00000481929 BARX2Q9UMQ3 279 aaPredicted RBP17.41■□□□□ 0.38
HDAC6-224ENST00000481929 KDM4AO75164 1064 aa17.4■□□□□ 0.38
HDAC6-224ENST00000481929 ITGB1P05556 798 aa17.4■□□□□ 0.38
HDAC6-224ENST00000481929 PCP11498 1178 aaKnown RBP17.4■□□□□ 0.38
HDAC6-224ENST00000481929 ICAM3P32942 547 aa17.4■□□□□ 0.38
HDAC6-224ENST00000481929 NRIP1P48552 1158 aa17.4■□□□□ 0.38
HDAC6-224ENST00000481929 HSD17B4P51659 736 aa17.4■□□□□ 0.38
HDAC6-224ENST00000481929 HAND2P61296 217 aa17.4■□□□□ 0.38
HDAC6-224ENST00000481929 MFSD6Q6ZSS7 791 aa17.4■□□□□ 0.38
HDAC6-224ENST00000481929 PNMA1Q8ND90 353 aa17.4■□□□□ 0.38
HDAC6-224ENST00000481929 USP26Q9BXU7 913 aa17.4■□□□□ 0.38
HDAC6-224ENST00000481929 PLXNA3P51805 1871 aa17.39■□□□□ 0.38
HDAC6-224ENST00000481929 GLP2RO95838 553 aa17.39■□□□□ 0.37
HDAC6-224ENST00000481929 DNAJB1P25685 340 aa17.39■□□□□ 0.37
HDAC6-224ENST00000481929 ARHGAP4P98171 946 aa17.39■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms