RNA–Protein interactions for RNA: ENST00000481879.1

KDM1A-204, Transcript of lysine demethylase 1A, humanhuman

TSL 3

Gene KDM1A, Length 525 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM1A-204ENST00000481879 R3HDM1Q15032 1099 aaKnown RBP4.28□□□□□ -1.72
KDM1A-204ENST00000481879 SV2CQ496J9 727 aa4.28□□□□□ -1.72
KDM1A-204ENST00000481879 TMC5Q6UXY8 1006 aa4.28□□□□□ -1.72
KDM1A-204ENST00000481879 NT5DC4Q86YG4 428 aa4.28□□□□□ -1.72
KDM1A-204ENST00000481879 PPIL6Q8IXY8 311 aa4.28□□□□□ -1.72
KDM1A-204ENST00000481879 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.28□□□□□ -1.72
KDM1A-204ENST00000481879 ANAPC16Q96DE5 110 aa4.28□□□□□ -1.72
KDM1A-204ENST00000481879 WWC2-AS2Q96NR7 200 aa4.28□□□□□ -1.72
KDM1A-204ENST00000481879 PCED1AQ9H1Q7 454 aa4.28□□□□□ -1.72
KDM1A-204ENST00000481879 SMOC1Q9H4F8 434 aa4.28□□□□□ -1.72
KDM1A-204ENST00000481879 CLDND1Q9NY35 253 aa4.28□□□□□ -1.72
KDM1A-204ENST00000481879 HSPBP1Q9NZL4 362 aa4.28□□□□□ -1.72
KDM1A-204ENST00000481879 HS3ST3A1Q9Y663 406 aa4.28□□□□□ -1.72
KDM1A-204ENST00000481879 SF1Q15637 639 aaKnown RBP4.27□□□□□ -1.73
KDM1A-204ENST00000481879 PRSS53Q2L4Q9 553 aa4.27□□□□□ -1.73
KDM1A-204ENST00000481879 CRB2Q5IJ48 1285 aa4.27□□□□□ -1.73
KDM1A-204ENST00000481879 ZNF227Q86WZ6 799 aa4.27□□□□□ -1.73
KDM1A-204ENST00000481879 Q8TCH9 128 aa4.27□□□□□ -1.73
KDM1A-204ENST00000481879 PHOSPHO1Q8TCT1 267 aa4.27□□□□□ -1.73
KDM1A-204ENST00000481879 EPB41L1Q9H4G0 881 aa4.27□□□□□ -1.73
KDM1A-204ENST00000481879 MYOTQ9UBF9 498 aa4.27□□□□□ -1.73
KDM1A-204ENST00000481879 ADAM29Q9UKF5 820 aa4.27□□□□□ -1.73
KDM1A-204ENST00000481879 MAFKO60675 156 aa4.26□□□□□ -1.73
KDM1A-204ENST00000481879 COL6A1P12109 1028 aa4.26□□□□□ -1.73
KDM1A-204ENST00000481879 TGM1P22735 817 aa4.26□□□□□ -1.73
KDM1A-204ENST00000481879 HDLBPQ00341 1268 aaKnown RBP4.26□□□□□ -1.73
KDM1A-204ENST00000481879 SPDYAQ5MJ70 313 aa4.26□□□□□ -1.73
KDM1A-204ENST00000481879 TMCO4Q5TGY1 634 aa4.26□□□□□ -1.73
KDM1A-204ENST00000481879 DENND5AQ6IQ26 1287 aa4.26□□□□□ -1.73
KDM1A-204ENST00000481879 C6orf15Q6UXA7 325 aaPredicted RBP4.26□□□□□ -1.73
KDM1A-204ENST00000481879 TRIM48Q8IWZ4 208 aa4.26□□□□□ -1.73
KDM1A-204ENST00000481879 NUDT10Q8NFP7 164 aa4.26□□□□□ -1.73
KDM1A-204ENST00000481879 NUDT11Q96G61 164 aa4.26□□□□□ -1.73
KDM1A-204ENST00000481879 MEGF9Q9H1U4 602 aa4.26□□□□□ -1.73
KDM1A-204ENST00000481879 RBPJLQ9UBG7 517 aa4.26□□□□□ -1.73
KDM1A-204ENST00000481879 ASH2LQ9UBL3 628 aa4.26□□□□□ -1.73
KDM1A-204ENST00000481879 KRIT1O00522 736 aa4.25□□□□□ -1.73
KDM1A-204ENST00000481879 GFRA1P56159 465 aa4.25□□□□□ -1.73
KDM1A-204ENST00000481879 HS1BP3Q53T59 392 aa4.25□□□□□ -1.73
KDM1A-204ENST00000481879 CYP4F22Q6NT55 531 aa4.25□□□□□ -1.73
KDM1A-204ENST00000481879 Q6ZUG5 572 aa4.25□□□□□ -1.73
KDM1A-204ENST00000481879 PROSER1Q86XN7 944 aa4.25□□□□□ -1.73
KDM1A-204ENST00000481879 FAM178BQ8IXR5 827 aa4.25□□□□□ -1.73
KDM1A-204ENST00000481879 TMEM145Q8NBT3 493 aa4.25□□□□□ -1.73
KDM1A-204ENST00000481879 SEC61A2Q9H9S3 476 aa4.25□□□□□ -1.73
KDM1A-204ENST00000481879 SUSD5O60279 629 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 KLHL18O94889 574 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 CNOT4O95628 575 aaKnown RBP4.24□□□□□ -1.73
KDM1A-204ENST00000481879 CHGBP05060 677 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 GRIN1Q05586 938 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 KLF10Q13118 480 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 SMAD2Q15796 467 aaKnown RBP4.24□□□□□ -1.73
KDM1A-204ENST00000481879 PHF19Q5T6S3 580 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 VASNQ6EMK4 673 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 RALYLQ86SE5 291 aaKnown RBP4.24□□□□□ -1.73
KDM1A-204ENST00000481879 DTX3Q8N9I9 347 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 TTLL11Q8NHH1 800 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 CLEC4DQ8WXI8 215 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 AJUBAQ96IF1 538 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 JAM3Q9BX67 310 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 ZNF341Q9BYN7 854 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 CDIP1Q9H305 208 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 SLC6A20Q9NP91 592 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 DLL4Q9NR61 685 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 INPP5FQ9Y2H2 1132 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 NPFFR2Q9Y5X5 522 aa4.24□□□□□ -1.73
KDM1A-204ENST00000481879 SLC27A2O14975 620 aa4.23□□□□□ -1.73
KDM1A-204ENST00000481879 SMAD7O15105 426 aaKnown RBP4.23□□□□□ -1.73
KDM1A-204ENST00000481879 FBXO21O94952 628 aa4.23□□□□□ -1.73
KDM1A-204ENST00000481879 CKMP06732 381 aa4.23□□□□□ -1.73
KDM1A-204ENST00000481879 MFAP1P55081 439 aaKnown RBP4.23□□□□□ -1.73
KDM1A-204ENST00000481879 PRKD1Q15139 912 aaPredicted RBP4.23□□□□□ -1.73
KDM1A-204ENST00000481879 SLC35F1Q5T1Q4 408 aa4.23□□□□□ -1.73
KDM1A-204ENST00000481879 LARP1BQ659C4 914 aaKnown RBP4.23□□□□□ -1.73
KDM1A-204ENST00000481879 TCTN3Q6NUS6 607 aa4.23□□□□□ -1.73
KDM1A-204ENST00000481879 PIP4K2CQ8TBX8 421 aa4.23□□□□□ -1.73
KDM1A-204ENST00000481879 C1orf159Q96HA4 380 aa4.23□□□□□ -1.73
KDM1A-204ENST00000481879 GNRHR2Q96P88 292 aa4.23□□□□□ -1.73
KDM1A-204ENST00000481879 TGIF2Q9GZN2 237 aa4.23□□□□□ -1.73
KDM1A-204ENST00000481879 ACBD3Q9H3P7 528 aa4.23□□□□□ -1.73
KDM1A-204ENST00000481879 ACTR10Q9NZ32 417 aa4.23□□□□□ -1.73
KDM1A-204ENST00000481879 ING1Q9UK53 422 aaPredicted RBP4.23□□□□□ -1.73
KDM1A-204ENST00000481879 SLC4A7Q9Y6M7 1214 aa4.23□□□□□ -1.73
KDM1A-204ENST00000481879 B2RBV5 119 aa4.22□□□□□ -1.73
KDM1A-204ENST00000481879 FOXS1O43638 330 aa4.22□□□□□ -1.73
KDM1A-204ENST00000481879 DDAH1O94760 285 aa4.22□□□□□ -1.73
KDM1A-204ENST00000481879 KNG1P01042 644 aa4.22□□□□□ -1.73
KDM1A-204ENST00000481879 CAPNS1P04632 268 aa4.22□□□□□ -1.73
KDM1A-204ENST00000481879 ENO2P09104 434 aaPredicted RBP4.22□□□□□ -1.73
KDM1A-204ENST00000481879 ATF4P18848 351 aaPredicted RBP4.22□□□□□ -1.73
KDM1A-204ENST00000481879 FOXE3Q13461 319 aa4.22□□□□□ -1.73
KDM1A-204ENST00000481879 TNNI3KQ59H18 835 aa4.22□□□□□ -1.73
KDM1A-204ENST00000481879 GIMAP8Q8ND71 665 aaPredicted RBP4.22□□□□□ -1.73
KDM1A-204ENST00000481879 LMF1Q96S06 567 aa4.22□□□□□ -1.73
KDM1A-204ENST00000481879 GPR27Q9NS67 375 aa4.22□□□□□ -1.73
KDM1A-204ENST00000481879 ZFR2Q9UPR6 939 aaKnown RBP4.22□□□□□ -1.73
KDM1A-204ENST00000481879 MRVI1Q9Y6F6 885 aa4.22□□□□□ -1.73
KDM1A-204ENST00000481879 NPIPB8E9PQR5 432 aa4.21□□□□□ -1.74
KDM1A-204ENST00000481879 FAHP16930 419 aa4.21□□□□□ -1.74
KDM1A-204ENST00000481879 CSF2RBP32927 897 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms