RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 MBTPS1Q14703 1052 aa13.35□□□□□ -0.27
GARNL3-217ENST00000481875 ZNF618Q5T7W0 954 aa13.35□□□□□ -0.27
GARNL3-217ENST00000481875 XRRA1Q6P2D8 792 aa13.35□□□□□ -0.27
GARNL3-217ENST00000481875 IL27Q8NEV9 243 aa13.35□□□□□ -0.27
GARNL3-217ENST00000481875 SENP7Q9BQF6 1050 aa13.35□□□□□ -0.27
GARNL3-217ENST00000481875 LSG1Q9H089 658 aaKnown RBP13.35□□□□□ -0.27
GARNL3-217ENST00000481875 COL4A4P53420 1690 aaPredicted RBP13.34□□□□□ -0.27
GARNL3-217ENST00000481875 COL4A6Q14031 1691 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 ERICH2A1L162 156 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 SPATA31C2B4DYI2 1134 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 H3BRB1 525 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 RFXAPO00287 272 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 PIK3CDO00329 1044 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 IFIT3O14879 490 aaKnown RBP13.34□□□□□ -0.27
GARNL3-217ENST00000481875 LGR5O75473 907 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 GGPS1O95749 300 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 ZNF286BP0CG31 522 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 MYCLP12524 364 aaPredicted RBP13.34□□□□□ -0.27
GARNL3-217ENST00000481875 HOXA13P31271 388 aaPredicted RBP13.34□□□□□ -0.27
GARNL3-217ENST00000481875 DEFB103AP81534 67 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 HTRA4P83105 476 aaPredicted RBP13.34□□□□□ -0.27
GARNL3-217ENST00000481875 HIC1Q14526 733 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 SART3Q15020 963 aaKnown RBP13.34□□□□□ -0.27
GARNL3-217ENST00000481875 GNPTABQ3T906 1256 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 PLEKHG4Q58EX7 1191 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 HS6ST3Q8IZP7 471 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 NCOA7Q8NI08 942 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 IL31RAQ8NI17 732 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 IGDCC4Q8TDY8 1250 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 ARNTL2Q8WYA1 636 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 MAP4K1Q92918 833 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 WNT8BQ93098 351 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 HLA-CQ95604 372 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 PIGSQ96S52 555 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 ALG1Q9BT22 464 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 TUT1Q9H6E5 874 aaKnown RBP13.34□□□□□ -0.27
GARNL3-217ENST00000481875 INSL6Q9Y581 213 aa13.34□□□□□ -0.27
GARNL3-217ENST00000481875 RBM8AQ9Y5S9 174 aaKnown RBP13.34□□□□□ -0.27
GARNL3-217ENST00000481875 DOCK5Q9H7D0 1870 aa13.33□□□□□ -0.27
GARNL3-217ENST00000481875 LCHNA4D1U4 455 aa13.33□□□□□ -0.28
GARNL3-217ENST00000481875 RSPH10B2B2RC85 870 aa13.33□□□□□ -0.28
GARNL3-217ENST00000481875 E7EWF7 191 aa13.33□□□□□ -0.28
GARNL3-217ENST00000481875 RSPH10BP0C881 870 aa13.33□□□□□ -0.28
GARNL3-217ENST00000481875 ADAM17P78536 824 aa13.33□□□□□ -0.28
GARNL3-217ENST00000481875 MRPS9P82933 396 aaKnown RBP13.33□□□□□ -0.28
GARNL3-217ENST00000481875 TFF2Q03403 129 aa13.33□□□□□ -0.28
GARNL3-217ENST00000481875 NEDD9Q14511 834 aa13.33□□□□□ -0.28
GARNL3-217ENST00000481875 TCTN1Q2MV58 587 aa13.33□□□□□ -0.28
GARNL3-217ENST00000481875 METTL7BQ6UX53 244 aa13.33□□□□□ -0.28
GARNL3-217ENST00000481875 RPAINQ86UA6 219 aa13.33□□□□□ -0.28
GARNL3-217ENST00000481875 SP7Q8TDD2 431 aaPredicted RBP13.33□□□□□ -0.28
GARNL3-217ENST00000481875 TGS1Q96RS0 853 aaKnown RBP13.33□□□□□ -0.28
GARNL3-217ENST00000481875 ZBED2Q9BTP6 218 aa13.33□□□□□ -0.28
GARNL3-217ENST00000481875 SPZ1Q9BXG8 430 aa13.33□□□□□ -0.28
GARNL3-217ENST00000481875 C1QTNF1Q9BXJ1 281 aa13.33□□□□□ -0.28
GARNL3-217ENST00000481875 CERS4Q9HA82 394 aa13.33□□□□□ -0.28
GARNL3-217ENST00000481875 SUGCTQ9HAC7 445 aa13.33□□□□□ -0.28
GARNL3-217ENST00000481875 MLXIPQ9HAP2 919 aa13.33□□□□□ -0.28
GARNL3-217ENST00000481875 MYO7AQ13402 2215 aa13.32□□□□□ -0.28
GARNL3-217ENST00000481875 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.32□□□□□ -0.28
GARNL3-217ENST00000481875 LINC01553A4QN01 128 aa13.32□□□□□ -0.28
GARNL3-217ENST00000481875 SEC24BO95487 1268 aa13.32□□□□□ -0.28
GARNL3-217ENST00000481875 LGALS2P05162 132 aa13.32□□□□□ -0.28
GARNL3-217ENST00000481875 GNAT1P11488 350 aa13.32□□□□□ -0.28
GARNL3-217ENST00000481875 COL9A1P20849 921 aa13.32□□□□□ -0.28
GARNL3-217ENST00000481875 CHMP4BP1P59074 171 aa13.32□□□□□ -0.28
GARNL3-217ENST00000481875 ZNF200P98182 395 aaPredicted RBP13.32□□□□□ -0.28
GARNL3-217ENST00000481875 WTAPQ15007 396 aa13.32□□□□□ -0.28
GARNL3-217ENST00000481875 PCNX4Q63HM2 1172 aa13.32□□□□□ -0.28
GARNL3-217ENST00000481875 TEX2Q8IWB9 1127 aa13.32□□□□□ -0.28
GARNL3-217ENST00000481875 TMTC2Q8N394 836 aa13.32□□□□□ -0.28
GARNL3-217ENST00000481875 LZTS2Q9BRK4 669 aa13.32□□□□□ -0.28
GARNL3-217ENST00000481875 RNPEPQ9H4A4 650 aa13.32□□□□□ -0.28
GARNL3-217ENST00000481875 SENP2Q9HC62 589 aa13.32□□□□□ -0.28
GARNL3-217ENST00000481875 ARIH1Q9Y4X5 557 aaPredicted RBP13.32□□□□□ -0.28
GARNL3-217ENST00000481875 TTC3P53804 2025 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 C17orf102A2RUQ5 167 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 FIBPO43427 364 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 EPB41L2O43491 1005 aaKnown RBP13.31□□□□□ -0.28
GARNL3-217ENST00000481875 DDAH1O94760 285 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 SMIM10L2AP0DMW4 78 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 SMIM10L2BP0DMW5 78 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 CHRM1P11229 460 aaPredicted RBP13.31□□□□□ -0.28
GARNL3-217ENST00000481875 KCNQ1P51787 676 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 ANTXR2P58335 489 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 SEMA3FQ13275 785 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 FAM26DQ5JW98 314 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 RNF20Q5VTR2 975 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 KRT40Q6A162 431 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 SPRED2Q7Z698 418 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 CATIPQ7Z7H3 387 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 RALYLQ86SE5 291 aaKnown RBP13.31□□□□□ -0.28
GARNL3-217ENST00000481875 HOMER1Q86YM7 354 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 MB21D2Q8IYB1 491 aaPredicted RBP13.31□□□□□ -0.28
GARNL3-217ENST00000481875 RASEFQ8IZ41 740 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 MICALL1Q8N3F8 863 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 GIMAP8Q8ND71 665 aaPredicted RBP13.31□□□□□ -0.28
GARNL3-217ENST00000481875 DBF4BQ8NFT6 615 aa13.31□□□□□ -0.28
GARNL3-217ENST00000481875 GPKOWQ92917 476 aaPredicted RBP eCLIP13.31□□□□□ -0.28
GARNL3-217ENST00000481875 ATP6V0A1Q93050 837 aa13.31□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms