RNA–Protein interactions for RNA: ENST00000481699.1

SHISA4-203, Transcript of shisa family member 4, humanhuman

TSL 3

Gene SHISA4, Length 723 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-203ENST00000481699 PCDHA12Q9UN75 941 aa26.06■■□□□ 1.76
SHISA4-203ENST00000481699 MCM3APO60318 1980 aa26.06■■□□□ 1.76
SHISA4-203ENST00000481699 DDX39AO00148 427 aaKnown RBP26.05■■□□□ 1.76
SHISA4-203ENST00000481699 SPTLC2O15270 562 aa26.05■■□□□ 1.76
SHISA4-203ENST00000481699 SEPT4O43236 478 aa26.05■■□□□ 1.76
SHISA4-203ENST00000481699 ARIH2O95376 493 aa26.05■■□□□ 1.76
SHISA4-203ENST00000481699 GGPS1O95749 300 aa26.05■■□□□ 1.76
SHISA4-203ENST00000481699 GH1P01241 217 aa26.05■■□□□ 1.76
SHISA4-203ENST00000481699 KCNA2P16389 499 aa26.05■■□□□ 1.76
SHISA4-203ENST00000481699 PRPHP41219 470 aa26.05■■□□□ 1.76
SHISA4-203ENST00000481699 SOX10P56693 466 aa26.05■■□□□ 1.76
SHISA4-203ENST00000481699 DUSP28Q4G0W2 176 aa26.05■■□□□ 1.76
SHISA4-203ENST00000481699 ARL6IP4Q66PJ3 421 aaKnown RBP26.05■■□□□ 1.76
SHISA4-203ENST00000481699 CCDC62Q6P9F0 684 aa26.05■■□□□ 1.76
SHISA4-203ENST00000481699 LINC00301Q8NCQ3 95 aa26.05■■□□□ 1.76
SHISA4-203ENST00000481699 TRPV1Q8NER1 839 aa26.05■■□□□ 1.76
SHISA4-203ENST00000481699 GBP4Q96PP9 640 aa26.05■■□□□ 1.76
SHISA4-203ENST00000481699 RAB34Q9BZG1 259 aa26.05■■□□□ 1.76
SHISA4-203ENST00000481699 NFASCO94856 1347 aa26.05■■□□□ 1.76
SHISA4-203ENST00000481699 PDE4DIPQ5VU43 2346 aa26.05■■□□□ 1.76
SHISA4-203ENST00000481699 C11orf97A0A1B0GVM6 126 aaPredicted RBP26.04■■□□□ 1.76
SHISA4-203ENST00000481699 SORBS3O60504 671 aa26.04■■□□□ 1.76
SHISA4-203ENST00000481699 ATP9AO75110 1047 aa26.04■■□□□ 1.76
SHISA4-203ENST00000481699 SMPD1P17405 629 aa26.04■■□□□ 1.76
SHISA4-203ENST00000481699 MARCKSP29966 332 aaPredicted RBP26.04■■□□□ 1.76
SHISA4-203ENST00000481699 ITGB3BPQ13352 177 aaPredicted RBP26.04■■□□□ 1.76
SHISA4-203ENST00000481699 PTPAQ15257 358 aa26.04■■□□□ 1.76
SHISA4-203ENST00000481699 MAP3K21Q5TCX8 1036 aa26.04■■□□□ 1.76
SHISA4-203ENST00000481699 CYFIP1Q7L576 1253 aa26.04■■□□□ 1.76
SHISA4-203ENST00000481699 C4orf32Q8N8J7 132 aa26.04■■□□□ 1.76
SHISA4-203ENST00000481699 HAS1Q92839 578 aa26.04■■□□□ 1.76
SHISA4-203ENST00000481699 GJA10Q969M2 543 aa26.04■■□□□ 1.76
SHISA4-203ENST00000481699 FERMT2Q96AC1 680 aa26.04■■□□□ 1.76
SHISA4-203ENST00000481699 CHAMP1Q96JM3 812 aa26.04■■□□□ 1.76
SHISA4-203ENST00000481699 AP5M1Q9H0R1 490 aa26.04■■□□□ 1.76
SHISA4-203ENST00000481699 TTC12Q9H892 705 aaPredicted RBP26.04■■□□□ 1.76
SHISA4-203ENST00000481699 JPH1Q9HDC5 661 aaPredicted RBP26.04■■□□□ 1.76
SHISA4-203ENST00000481699 RARBP10826 455 aa26.03■■□□□ 1.76
SHISA4-203ENST00000481699 CCND3P30281 292 aaPredicted RBP26.03■■□□□ 1.76
SHISA4-203ENST00000481699 ME1P48163 572 aa26.03■■□□□ 1.76
SHISA4-203ENST00000481699 SP2Q02086 613 aa26.03■■□□□ 1.76
SHISA4-203ENST00000481699 SP4Q02446 784 aa26.03■■□□□ 1.76
SHISA4-203ENST00000481699 LAMC2Q13753 1193 aa26.03■■□□□ 1.76
SHISA4-203ENST00000481699 CELF3Q5SZQ8 465 aaKnown RBP26.03■■□□□ 1.76
SHISA4-203ENST00000481699 OR6J1Q8NGC5 347 aa26.03■■□□□ 1.76
SHISA4-203ENST00000481699 SLC9A2Q9UBY0 812 aa26.03■■□□□ 1.76
SHISA4-203ENST00000481699 MYH15Q9Y2K3 1946 aa26.03■■□□□ 1.76
SHISA4-203ENST00000481699 VWA3AA6NCI4 1184 aa26.02■■□□□ 1.76
SHISA4-203ENST00000481699 NOP56O00567 594 aaKnown RBP26.02■■□□□ 1.76
SHISA4-203ENST00000481699 KRT76Q01546 638 aa26.02■■□□□ 1.76
SHISA4-203ENST00000481699 METTL7BQ6UX53 244 aa26.02■■□□□ 1.76
SHISA4-203ENST00000481699 KRI1Q8N9T8 703 aaKnown RBP26.02■■□□□ 1.76
SHISA4-203ENST00000481699 LEO1Q8WVC0 666 aaPredicted RBP26.02■■□□□ 1.76
SHISA4-203ENST00000481699 SPC25Q9HBM1 224 aa26.02■■□□□ 1.76
SHISA4-203ENST00000481699 RCOR1Q9UKL0 485 aa26.02■■□□□ 1.76
SHISA4-203ENST00000481699 CHMP2AO43633 222 aa26.01■■□□□ 1.75
SHISA4-203ENST00000481699 MSCO60682 206 aa26.01■■□□□ 1.75
SHISA4-203ENST00000481699 PPP6R2O75170 966 aa26.01■■□□□ 1.75
SHISA4-203ENST00000481699 PSMD10O75832 226 aa26.01■■□□□ 1.75
SHISA4-203ENST00000481699 TECP42680 631 aa26.01■■□□□ 1.75
SHISA4-203ENST00000481699 KIAA1217Q5T5P2 1943 aa26.01■■□□□ 1.75
SHISA4-203ENST00000481699 TLK2Q86UE8 772 aa26.01■■□□□ 1.75
SHISA4-203ENST00000481699 COPS5Q92905 334 aa26.01■■□□□ 1.75
SHISA4-203ENST00000481699 SPATA33Q96N06 139 aa26.01■■□□□ 1.75
SHISA4-203ENST00000481699 SAMM50Q9Y512 469 aa26.01■■□□□ 1.75
SHISA4-203ENST00000481699 MORC2Q9Y6X9 1032 aaPredicted RBP26.01■■□□□ 1.75
SHISA4-203ENST00000481699 DYNC1LI2O43237 492 aaPredicted RBP26■■□□□ 1.75
SHISA4-203ENST00000481699 DUSP11O75319 330 aaKnown RBP26■■□□□ 1.75
SHISA4-203ENST00000481699 MYCP01106 439 aaPredicted RBP26■■□□□ 1.75
SHISA4-203ENST00000481699 BRDTQ58F21 947 aaPredicted RBP26■■□□□ 1.75
SHISA4-203ENST00000481699 GJC2Q5T442 439 aaPredicted RBP26■■□□□ 1.75
SHISA4-203ENST00000481699 NCAPH2Q6IBW4 605 aa26■■□□□ 1.75
SHISA4-203ENST00000481699 GDPD2Q9HCC8 539 aa26■■□□□ 1.75
SHISA4-203ENST00000481699 DDX20Q9UHI6 824 aaKnown RBP26■■□□□ 1.75
SHISA4-203ENST00000481699 SRPRBQ9Y5M8 271 aaKnown RBP26■■□□□ 1.75
SHISA4-203ENST00000481699 DHX15O43143 795 aaKnown RBP25.99■■□□□ 1.75
SHISA4-203ENST00000481699 FARP2O94887 1054 aaPredicted RBP25.99■■□□□ 1.75
SHISA4-203ENST00000481699 FXR2P51116 673 aaKnown RBP eCLIP25.99■■□□□ 1.75
SHISA4-203ENST00000481699 ZNF746Q6NUN9 644 aaPredicted RBP25.99■■□□□ 1.75
SHISA4-203ENST00000481699 MIER3Q7Z3K6 550 aa25.99■■□□□ 1.75
SHISA4-203ENST00000481699 XRN2Q9H0D6 950 aaKnown RBP eCLIP25.99■■□□□ 1.75
SHISA4-203ENST00000481699 UNC45AQ9H3U1 944 aa25.99■■□□□ 1.75
SHISA4-203ENST00000481699 Q9Y3F1 56 aa25.99■■□□□ 1.75
SHISA4-203ENST00000481699 ELP1O95163 1332 aa25.98■■□□□ 1.75
SHISA4-203ENST00000481699 GOLGA6L4A6NEF3 574 aa25.98■■□□□ 1.75
SHISA4-203ENST00000481699 WDR64B1ANS9 1081 aa25.98■■□□□ 1.75
SHISA4-203ENST00000481699 SFNP31947 248 aa25.98■■□□□ 1.75
SHISA4-203ENST00000481699 JAK3P52333 1124 aa25.98■■□□□ 1.75
SHISA4-203ENST00000481699 ARHGAP1Q07960 439 aa25.98■■□□□ 1.75
SHISA4-203ENST00000481699 PPP2R5CQ13362 524 aa25.98■■□□□ 1.75
SHISA4-203ENST00000481699 TMEM63BQ5T3F8 832 aa25.98■■□□□ 1.75
SHISA4-203ENST00000481699 SMAP1Q8IYB5 467 aaPredicted RBP25.98■■□□□ 1.75
SHISA4-203ENST00000481699 ERMNQ8TAM6 284 aa25.98■■□□□ 1.75
SHISA4-203ENST00000481699 LENG1Q96BZ8 264 aaPredicted RBP25.98■■□□□ 1.75
SHISA4-203ENST00000481699 UNC93B1Q9H1C4 597 aa25.98■■□□□ 1.75
SHISA4-203ENST00000481699 XPNPEP3Q9NQH7 507 aa25.98■■□□□ 1.75
SHISA4-203ENST00000481699 LRWD1Q9UFC0 647 aa25.98■■□□□ 1.75
SHISA4-203ENST00000481699 FBXO2Q9UK22 296 aaPredicted RBP25.98■■□□□ 1.75
SHISA4-203ENST00000481699 VAV3Q9UKW4 847 aa25.98■■□□□ 1.75
SHISA4-203ENST00000481699 GNEQ9Y223 722 aaKnown RBP25.98■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms