RNA–Protein interactions for RNA: ENST00000481644.1

HSPG2-210, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 839 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-210ENST00000481644 CCL23P55773 120 aa21.4■■□□□ 1.02
HSPG2-210ENST00000481644 ANKRD1Q15327 319 aa21.4■■□□□ 1.02
HSPG2-210ENST00000481644 JAKMIP3Q5VZ66 844 aa21.4■■□□□ 1.02
HSPG2-210ENST00000481644 GPR20Q99678 358 aa21.4■■□□□ 1.02
HSPG2-210ENST00000481644 VPS54Q9P1Q0 977 aa21.4■■□□□ 1.02
HSPG2-210ENST00000481644 MAFGO15525 162 aa21.39■■□□□ 1.01
HSPG2-210ENST00000481644 ATP9AO75110 1047 aa21.39■■□□□ 1.01
HSPG2-210ENST00000481644 LGALS2P05162 132 aa21.39■■□□□ 1.01
HSPG2-210ENST00000481644 KCNA2P16389 499 aa21.39■■□□□ 1.01
HSPG2-210ENST00000481644 SREBF1P36956 1147 aa21.39■■□□□ 1.01
HSPG2-210ENST00000481644 SP4Q02446 784 aa21.39■■□□□ 1.01
HSPG2-210ENST00000481644 PTGISQ16647 500 aa21.39■■□□□ 1.01
HSPG2-210ENST00000481644 MCTP2Q6DN12 878 aa21.39■■□□□ 1.01
HSPG2-210ENST00000481644 GDF6Q6KF10 455 aaPredicted RBP21.39■■□□□ 1.01
HSPG2-210ENST00000481644 REXO1Q8N1G1 1221 aaKnown RBP21.39■■□□□ 1.01
HSPG2-210ENST00000481644 RNPC3Q96LT9 517 aaKnown RBP21.39■■□□□ 1.01
HSPG2-210ENST00000481644 MXRA8Q9BRK3 442 aa21.39■■□□□ 1.01
HSPG2-210ENST00000481644 C16orf70Q9BSU1 422 aa21.39■■□□□ 1.01
HSPG2-210ENST00000481644 WNT8AQ9H1J5 351 aa21.39■■□□□ 1.01
HSPG2-210ENST00000481644 SLKQ9H2G2 1235 aaPredicted RBP21.39■■□□□ 1.01
HSPG2-210ENST00000481644 PKD2L1Q9P0L9 805 aa21.39■■□□□ 1.01
HSPG2-210ENST00000481644 HDAC6Q9UBN7 1215 aa21.39■■□□□ 1.01
HSPG2-210ENST00000481644 GTF2IRD1Q9UHL9 959 aa21.39■■□□□ 1.01
HSPG2-210ENST00000481644 TPCN1Q9ULQ1 816 aa21.39■■□□□ 1.01
HSPG2-210ENST00000481644 AK2P54819 239 aa21.38■■□□□ 1.01
HSPG2-210ENST00000481644 ARHGAP4P98171 946 aa21.38■■□□□ 1.01
HSPG2-210ENST00000481644 SCRN1Q12765 414 aa21.38■■□□□ 1.01
HSPG2-210ENST00000481644 BICD2Q8TD16 824 aa21.38■■□□□ 1.01
HSPG2-210ENST00000481644 BUD13Q9BRD0 619 aaKnown RBP eCLIP21.38■■□□□ 1.01
HSPG2-210ENST00000481644 TANC1Q9C0D5 1861 aa21.37■■□□□ 1.01
HSPG2-210ENST00000481644 H3BRB1 525 aa21.37■■□□□ 1.01
HSPG2-210ENST00000481644 ADAMTS3O15072 1205 aa21.37■■□□□ 1.01
HSPG2-210ENST00000481644 DEXIO95424 95 aa21.37■■□□□ 1.01
HSPG2-210ENST00000481644 ACRP10323 421 aa21.37■■□□□ 1.01
HSPG2-210ENST00000481644 ZNF76P36508 570 aa21.37■■□□□ 1.01
HSPG2-210ENST00000481644 C8orf34Q49A92 452 aa21.37■■□□□ 1.01
HSPG2-210ENST00000481644 CEP55Q53EZ4 464 aa21.37■■□□□ 1.01
HSPG2-210ENST00000481644 CYP2W1Q8TAV3 490 aa21.37■■□□□ 1.01
HSPG2-210ENST00000481644 SCLYQ96I15 445 aa21.37■■□□□ 1.01
HSPG2-210ENST00000481644 TUT1Q9H6E5 874 aaKnown RBP21.37■■□□□ 1.01
HSPG2-210ENST00000481644 IL23AQ9NPF7 189 aa21.37■■□□□ 1.01
HSPG2-210ENST00000481644 SH3GLB2Q9NR46 395 aa21.37■■□□□ 1.01
HSPG2-210ENST00000481644 KCNH7Q9NS40 1196 aa21.37■■□□□ 1.01
HSPG2-210ENST00000481644 TELO2Q9Y4R8 837 aa21.37■■□□□ 1.01
HSPG2-210ENST00000481644 PFKFB2O60825 505 aa21.36■■□□□ 1.01
HSPG2-210ENST00000481644 CDKL5O76039 1030 aa21.36■■□□□ 1.01
HSPG2-210ENST00000481644 NLRP5P59047 1200 aa21.36■■□□□ 1.01
HSPG2-210ENST00000481644 BFSP2Q13515 415 aa21.36■■□□□ 1.01
HSPG2-210ENST00000481644 TMEM240Q5SV17 173 aa21.36■■□□□ 1.01
HSPG2-210ENST00000481644 UTP14CQ5TAP6 766 aaKnown RBP21.36■■□□□ 1.01
HSPG2-210ENST00000481644 PSRC1Q6PGN9 363 aaPredicted RBP21.36■■□□□ 1.01
HSPG2-210ENST00000481644 C16orf59Q7L2K0 433 aa21.36■■□□□ 1.01
HSPG2-210ENST00000481644 CCDC155Q8N6L0 562 aa21.36■■□□□ 1.01
HSPG2-210ENST00000481644 RETREG2Q8NC44 543 aa21.36■■□□□ 1.01
HSPG2-210ENST00000481644 TRIP12Q14669 1992 aaPredicted RBP21.36■■□□□ 1.01
HSPG2-210ENST00000481644 SCN5AQ14524 2016 aa21.35■■□□□ 1.01
HSPG2-210ENST00000481644 PITPNM1O00562 1244 aa21.35■■□□□ 1.01
HSPG2-210ENST00000481644 NEK4P51957 841 aa21.35■■□□□ 1.01
HSPG2-210ENST00000481644 GPR153Q6NV75 609 aa21.35■■□□□ 1.01
HSPG2-210ENST00000481644 ZNF365Q70YC5 407 aa21.35■■□□□ 1.01
HSPG2-210ENST00000481644 TRIM50Q86XT4 487 aa21.35■■□□□ 1.01
HSPG2-210ENST00000481644 RASGRP4Q8TDF6 673 aa21.35■■□□□ 1.01
HSPG2-210ENST00000481644 CTAGE1Q96RT6 745 aa21.35■■□□□ 1.01
HSPG2-210ENST00000481644 ZNF215Q9UL58 517 aaPredicted RBP21.35■■□□□ 1.01
HSPG2-210ENST00000481644 MEIS1O00470 390 aa21.34■■□□□ 1.01
HSPG2-210ENST00000481644 ARP10275 920 aa21.34■■□□□ 1.01
HSPG2-210ENST00000481644 TCF7P36402 384 aaPredicted RBP21.34■■□□□ 1.01
HSPG2-210ENST00000481644 NIPA1Q7RTP0 329 aa21.34■■□□□ 1.01
HSPG2-210ENST00000481644 RPUSD2Q8IZ73 545 aaKnown RBP21.34■■□□□ 1.01
HSPG2-210ENST00000481644 CAGE1Q8TC20 777 aa21.34■■□□□ 1.01
HSPG2-210ENST00000481644 CRYGNQ8WXF5 182 aa21.34■■□□□ 1.01
HSPG2-210ENST00000481644 SEPT1Q8WYJ6 367 aa21.34■■□□□ 1.01
HSPG2-210ENST00000481644 SDF4Q9BRK5 362 aa21.34■■□□□ 1.01
HSPG2-210ENST00000481644 JPH1Q9HDC5 661 aaPredicted RBP21.34■■□□□ 1.01
HSPG2-210ENST00000481644 NFASCO94856 1347 aa21.33■■□□□ 1.01
HSPG2-210ENST00000481644 CYP3A4P08684 503 aa21.33■■□□□ 1.01
HSPG2-210ENST00000481644 SMIM10L2AP0DMW4 78 aa21.33■■□□□ 1.01
HSPG2-210ENST00000481644 SMIM10L2BP0DMW5 78 aa21.33■■□□□ 1.01
HSPG2-210ENST00000481644 AIFM3Q96NN9 605 aa21.33■■□□□ 1.01
HSPG2-210ENST00000481644 AGO4Q9HCK5 861 aaKnown RBP21.33■■□□□ 1.01
HSPG2-210ENST00000481644 SLC9A2Q9UBY0 812 aa21.33■■□□□ 1.01
HSPG2-210ENST00000481644 SZT2Q5T011 3432 aa21.33■■□□□ 1
HSPG2-210ENST00000481644 STK36Q9NRP7 1315 aa21.32■■□□□ 1
HSPG2-210ENST00000481644 GSTTP1A0A1W2PQM5 241 aa21.32■■□□□ 1
HSPG2-210ENST00000481644 C17orf102A2RUQ5 167 aa21.32■■□□□ 1
HSPG2-210ENST00000481644 FAM86B1E9PN63 330 aa21.32■■□□□ 1
HSPG2-210ENST00000481644 FGBP02675 491 aa21.32■■□□□ 1
HSPG2-210ENST00000481644 FAM86B2P0C5J1 330 aa21.32■■□□□ 1
HSPG2-210ENST00000481644 ZNF200P98182 395 aaPredicted RBP21.32■■□□□ 1
HSPG2-210ENST00000481644 PTK7Q13308 1070 aa21.32■■□□□ 1
HSPG2-210ENST00000481644 PLA2G4DQ86XP0 818 aa21.32■■□□□ 1
HSPG2-210ENST00000481644 DHX38Q92620 1227 aaKnown RBP21.32■■□□□ 1
HSPG2-210ENST00000481644 PCDHA4Q9UN74 947 aa21.32■■□□□ 1
HSPG2-210ENST00000481644 LARGE1O95461 756 aa21.31■■□□□ 1
HSPG2-210ENST00000481644 PFKMP08237 780 aa21.31■■□□□ 1
HSPG2-210ENST00000481644 IQCF3P0C7M6 154 aa21.31■■□□□ 1
HSPG2-210ENST00000481644 RFC2P35250 354 aa21.31■■□□□ 1
HSPG2-210ENST00000481644 SMAD3P84022 425 aaKnown RBP21.31■■□□□ 1
HSPG2-210ENST00000481644 ITGB3BPQ13352 177 aaPredicted RBP21.31■■□□□ 1
HSPG2-210ENST00000481644 HIC1Q14526 733 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms