RNA–Protein interactions for RNA: ENST00000481173.1

CCNL1-223, Transcript of cyclin L1, human

TSL 2

Gene CCNL1, Length 571 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CCNL1-223	ENST00000481173	BARX1	Q9HBU1	254 aa	Predicted RBP	5.45	□□□□□ -1.54
CCNL1-223	ENST00000481173	INPP5F	Q9Y2H2	1132 aa		5.45	□□□□□ -1.54
CCNL1-223	ENST00000481173	PCDHA2	Q9Y5H9	948 aa		5.45	□□□□□ -1.54
CCNL1-223	ENST00000481173	TADA3	O75528	432 aa		5.44	□□□□□ -1.54
CCNL1-223	ENST00000481173	SF1	Q15637	639 aa	Known RBP	5.44	□□□□□ -1.54
CCNL1-223	ENST00000481173	ANAPC16	Q96DE5	110 aa		5.44	□□□□□ -1.54
CCNL1-223	ENST00000481173	WRNIP1	Q96S55	665 aa		5.44	□□□□□ -1.54
CCNL1-223	ENST00000481173	TGIF2	Q9GZN2	237 aa		5.44	□□□□□ -1.54
CCNL1-223	ENST00000481173	CCSER2	Q9H7U1	834 aa		5.44	□□□□□ -1.54
CCNL1-223	ENST00000481173	CLDND1	Q9NY35	253 aa		5.44	□□□□□ -1.54
CCNL1-223	ENST00000481173	MYOT	Q9UBF9	498 aa		5.44	□□□□□ -1.54
CCNL1-223	ENST00000481173	NPIPB8	E9PQR5	432 aa		5.43	□□□□□ -1.54
CCNL1-223	ENST00000481173	COL6A1	P12109	1028 aa		5.43	□□□□□ -1.54
CCNL1-223	ENST00000481173	ZNF143	P52747	638 aa	Predicted RBP	5.43	□□□□□ -1.54
CCNL1-223	ENST00000481173	EMC4	Q5J8M3	183 aa		5.43	□□□□□ -1.54
CCNL1-223	ENST00000481173	PPIL6	Q8IXY8	311 aa		5.43	□□□□□ -1.54
CCNL1-223	ENST00000481173	KREMEN2	Q8NCW0	462 aa		5.43	□□□□□ -1.54
CCNL1-223	ENST00000481173	SEC16B	Q96JE7	1060 aa		5.43	□□□□□ -1.54
CCNL1-223	ENST00000481173	ADAM29	Q9UKF5	820 aa		5.43	□□□□□ -1.54
CCNL1-223	ENST00000481173		H7BY64	318 aa		5.42	□□□□□ -1.54
CCNL1-223	ENST00000481173	CNOT4	O95628	575 aa	Known RBP	5.42	□□□□□ -1.54
CCNL1-223	ENST00000481173	ITGAV	P06756	1048 aa		5.42	□□□□□ -1.54
CCNL1-223	ENST00000481173	HOXC12	P31275	282 aa		5.42	□□□□□ -1.54
CCNL1-223	ENST00000481173	KCNJ6	P48051	423 aa		5.42	□□□□□ -1.54
CCNL1-223	ENST00000481173	LSAMP	Q13449	338 aa		5.42	□□□□□ -1.54
CCNL1-223	ENST00000481173	NCAPH	Q15003	741 aa		5.42	□□□□□ -1.54
CCNL1-223	ENST00000481173	GPR155	Q7Z3F1	870 aa		5.42	□□□□□ -1.54
CCNL1-223	ENST00000481173	ZNF227	Q86WZ6	799 aa		5.42	□□□□□ -1.54
CCNL1-223	ENST00000481173	PPIL4	Q8WUA2	492 aa	Known RBP eCLIP	5.42	□□□□□ -1.54
CCNL1-223	ENST00000481173	SEMA4A	Q9H3S1	761 aa		5.42	□□□□□ -1.54
CCNL1-223	ENST00000481173	LRP2BP	Q9P2M1	347 aa		5.42	□□□□□ -1.54
CCNL1-223	ENST00000481173	TESMIN	Q9Y4I5	508 aa		5.42	□□□□□ -1.54
CCNL1-223	ENST00000481173	MRVI1	Q9Y6F6	885 aa		5.42	□□□□□ -1.54
CCNL1-223	ENST00000481173	FOXS1	O43638	330 aa		5.41	□□□□□ -1.54
CCNL1-223	ENST00000481173	DGKI	O75912	1065 aa		5.41	□□□□□ -1.54
CCNL1-223	ENST00000481173	LTBR	P36941	435 aa		5.41	□□□□□ -1.54
CCNL1-223	ENST00000481173	FHL2	Q14192	279 aa		5.41	□□□□□ -1.54
CCNL1-223	ENST00000481173	SV2C	Q496J9	727 aa		5.41	□□□□□ -1.54
CCNL1-223	ENST00000481173	ACBD5	Q5T8D3	534 aa	Predicted RBP	5.41	□□□□□ -1.54
CCNL1-223	ENST00000481173	DENND5A	Q6IQ26	1287 aa		5.41	□□□□□ -1.54
CCNL1-223	ENST00000481173	TCTN3	Q6NUS6	607 aa		5.41	□□□□□ -1.54
CCNL1-223	ENST00000481173	RALYL	Q86SE5	291 aa	Known RBP	5.41	□□□□□ -1.54
CCNL1-223	ENST00000481173	PROSER1	Q86XN7	944 aa		5.41	□□□□□ -1.54
CCNL1-223	ENST00000481173	ZNF428	Q96B54	188 aa		5.41	□□□□□ -1.54
CCNL1-223	ENST00000481173	LRRC37B	Q96QE4	947 aa		5.41	□□□□□ -1.54
CCNL1-223	ENST00000481173	KLHL18	O94889	574 aa		5.4	□□□□□ -1.54
CCNL1-223	ENST00000481173	ATF4	P18848	351 aa	Predicted RBP	5.4	□□□□□ -1.54
CCNL1-223	ENST00000481173	ERCC5	P28715	1186 aa	Predicted RBP	5.4	□□□□□ -1.54
CCNL1-223	ENST00000481173	GRIN1	Q05586	938 aa		5.4	□□□□□ -1.54
CCNL1-223	ENST00000481173	HS1BP3	Q53T59	392 aa		5.4	□□□□□ -1.54
CCNL1-223	ENST00000481173	IGFL4	Q6B9Z1	124 aa		5.4	□□□□□ -1.54
CCNL1-223	ENST00000481173	ADO	Q96SZ5	270 aa		5.4	□□□□□ -1.54
CCNL1-223	ENST00000481173	EPB41L1	Q9H4G0	881 aa		5.4	□□□□□ -1.54
CCNL1-223	ENST00000481173		B2RBV5	119 aa		5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	SLC27A2	O14975	620 aa		5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	SCG5	P05408	212 aa		5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	FOXE3	Q13461	319 aa		5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	PRKD1	Q15139	912 aa	Predicted RBP	5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	TESK1	Q15569	626 aa		5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	NRN1L	Q496H8	165 aa		5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	VASN	Q6EMK4	673 aa		5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	C6orf15	Q6UXA7	325 aa	Predicted RBP	5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173		Q6ZUG5	572 aa		5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	RBM12B	Q8IXT5	1001 aa	Known RBP	5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	DTX3	Q8N9I9	347 aa		5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	TMEM145	Q8NBT3	493 aa		5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	GIMAP8	Q8ND71	665 aa	Predicted RBP	5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	LMF1	Q96S06	567 aa		5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	SMOC1	Q9H4F8	434 aa		5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	CAPN10	Q9HC96	672 aa		5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	ASH2L	Q9UBL3	628 aa		5.39	□□□□□ -1.55
CCNL1-223	ENST00000481173	SMAD7	O15105	426 aa	Known RBP	5.38	□□□□□ -1.55
CCNL1-223	ENST00000481173	CP	P00450	1065 aa		5.38	□□□□□ -1.55
CCNL1-223	ENST00000481173	GLRB	P48167	497 aa		5.38	□□□□□ -1.55
CCNL1-223	ENST00000481173	GFRA1	P56159	465 aa		5.38	□□□□□ -1.55
CCNL1-223	ENST00000481173	SMAD2	Q15796	467 aa	Known RBP	5.38	□□□□□ -1.55
CCNL1-223	ENST00000481173	PIP4K2C	Q8TBX8	421 aa		5.38	□□□□□ -1.55
CCNL1-223	ENST00000481173	PHOSPHO1	Q8TCT1	267 aa		5.38	□□□□□ -1.55
CCNL1-223	ENST00000481173	JAM3	Q9BX67	310 aa		5.38	□□□□□ -1.55
CCNL1-223	ENST00000481173	SEC61A2	Q9H9S3	476 aa		5.38	□□□□□ -1.55
CCNL1-223	ENST00000481173	DLL4	Q9NR61	685 aa		5.38	□□□□□ -1.55
CCNL1-223	ENST00000481173	PPARGC1A	Q9UBK2	798 aa	Known RBP	5.38	□□□□□ -1.55
CCNL1-223	ENST00000481173	STRIP2	Q9ULQ0	834 aa		5.38	□□□□□ -1.55
CCNL1-223	ENST00000481173	ZFR2	Q9UPR6	939 aa	Known RBP	5.38	□□□□□ -1.55
CCNL1-223	ENST00000481173	PTPN22	Q9Y2R2	807 aa		5.38	□□□□□ -1.55
CCNL1-223	ENST00000481173	SLC4A7	Q9Y6M7	1214 aa		5.38	□□□□□ -1.55
CCNL1-223	ENST00000481173	CKM	P06732	381 aa		5.37	□□□□□ -1.55
CCNL1-223	ENST00000481173	CSF2RB	P32927	897 aa		5.37	□□□□□ -1.55
CCNL1-223	ENST00000481173	TGFB2	P61812	414 aa		5.37	□□□□□ -1.55
CCNL1-223	ENST00000481173	SKIDA1	Q1XH10	827 aa		5.37	□□□□□ -1.55
CCNL1-223	ENST00000481173	USP39	Q53GS9	565 aa	Known RBP	5.37	□□□□□ -1.55
CCNL1-223	ENST00000481173	RNF207	Q6ZRF8	634 aa		5.37	□□□□□ -1.55
CCNL1-223	ENST00000481173	TAX1BP1	Q86VP1	789 aa		5.37	□□□□□ -1.55
CCNL1-223	ENST00000481173	VPS37D	Q86XT2	251 aa		5.37	□□□□□ -1.55
CCNL1-223	ENST00000481173	CLEC4D	Q8WXI8	215 aa		5.37	□□□□□ -1.55
CCNL1-223	ENST00000481173	ZFP69B	Q9UJL9	534 aa		5.37	□□□□□ -1.55
CCNL1-223	ENST00000481173	KRIT1	O00522	736 aa		5.36	□□□□□ -1.55
CCNL1-223	ENST00000481173	SUSD5	O60279	629 aa		5.36	□□□□□ -1.55
CCNL1-223	ENST00000481173	MAFK	O60675	156 aa		5.36	□□□□□ -1.55
CCNL1-223	ENST00000481173	FBXO21	O94952	628 aa		5.36	□□□□□ -1.55

Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms