RNA–Protein interactions for RNA: ENST00000480539.1

ABCF3-213, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 2

Gene ABCF3, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-213ENST00000480539 ALPK3Q96L96 1907 aa17.21■□□□□ 0.35
ABCF3-213ENST00000480539 KIF28PB7ZC32 967 aa17.2■□□□□ 0.34
ABCF3-213ENST00000480539 ZNF286BP0CG31 522 aa17.2■□□□□ 0.34
ABCF3-213ENST00000480539 CIITAP33076 1130 aa17.2■□□□□ 0.34
ABCF3-213ENST00000480539 PURAQ00577 322 aaKnown RBP17.2■□□□□ 0.34
ABCF3-213ENST00000480539 ITGB3BPQ13352 177 aaPredicted RBP17.2■□□□□ 0.34
ABCF3-213ENST00000480539 METTL7BQ6UX53 244 aa17.2■□□□□ 0.34
ABCF3-213ENST00000480539 NEK8Q86SG6 692 aa17.2■□□□□ 0.34
ABCF3-213ENST00000480539 SENP7Q9BQF6 1050 aa17.2■□□□□ 0.34
ABCF3-213ENST00000480539 POLR3EQ9NVU0 708 aa17.2■□□□□ 0.34
ABCF3-213ENST00000480539 H3BQV1 296 aa17.19■□□□□ 0.34
ABCF3-213ENST00000480539 DDX39AO00148 427 aaKnown RBP17.19■□□□□ 0.34
ABCF3-213ENST00000480539 NOP56O00567 594 aaKnown RBP17.19■□□□□ 0.34
ABCF3-213ENST00000480539 SLC37A4O43826 429 aa17.19■□□□□ 0.34
ABCF3-213ENST00000480539 USP11P51784 963 aa17.19■□□□□ 0.34
ABCF3-213ENST00000480539 PSMC6P62333 389 aa17.19■□□□□ 0.34
ABCF3-213ENST00000480539 MLLT1Q03111 559 aaPredicted RBP17.19■□□□□ 0.34
ABCF3-213ENST00000480539 VTI1AQ96AJ9 217 aa17.19■□□□□ 0.34
ABCF3-213ENST00000480539 GLT1D1Q96MS3 346 aa17.19■□□□□ 0.34
ABCF3-213ENST00000480539 ZNF577Q9BSK1 485 aa17.19■□□□□ 0.34
ABCF3-213ENST00000480539 HTATIP2Q9BUP3 242 aa17.19■□□□□ 0.34
ABCF3-213ENST00000480539 MAFGO15525 162 aa17.18■□□□□ 0.34
ABCF3-213ENST00000480539 CCNT1O60563 726 aaKnown RBP17.18■□□□□ 0.34
ABCF3-213ENST00000480539 RTP1P59025 263 aa17.18■□□□□ 0.34
ABCF3-213ENST00000480539 CHMP4BP1P59074 171 aa17.18■□□□□ 0.34
ABCF3-213ENST00000480539 DGKDQ16760 1214 aa17.18■□□□□ 0.34
ABCF3-213ENST00000480539 SLC39A5Q6ZMH5 540 aa17.18■□□□□ 0.34
ABCF3-213ENST00000480539 GIMAP8Q8ND71 665 aaPredicted RBP17.18■□□□□ 0.34
ABCF3-213ENST00000480539 PPP1R13LQ8WUF5 828 aa17.18■□□□□ 0.34
ABCF3-213ENST00000480539 GJA10Q969M2 543 aa17.18■□□□□ 0.34
ABCF3-213ENST00000480539 INTS4Q96HW7 963 aaKnown RBP17.18■□□□□ 0.34
ABCF3-213ENST00000480539 SDF4Q9BRK5 362 aa17.18■□□□□ 0.34
ABCF3-213ENST00000480539 MTG1Q9BT17 334 aaPredicted RBP17.18■□□□□ 0.34
ABCF3-213ENST00000480539 FOXP1Q9H334 677 aaPredicted RBP17.18■□□□□ 0.34
ABCF3-213ENST00000480539 JPH1Q9HDC5 661 aaPredicted RBP17.18■□□□□ 0.34
ABCF3-213ENST00000480539 DDX25Q9UHL0 483 aaKnown RBP17.18■□□□□ 0.34
ABCF3-213ENST00000480539 A0A0U1RQG5 324 aaPredicted RBP17.17■□□□□ 0.34
ABCF3-213ENST00000480539 IPO5O00410 1097 aaKnown RBP17.17■□□□□ 0.34
ABCF3-213ENST00000480539 WNT7AO00755 349 aa17.17■□□□□ 0.34
ABCF3-213ENST00000480539 MSH4O15457 936 aa17.17■□□□□ 0.34
ABCF3-213ENST00000480539 TRIM60Q495X7 471 aa17.17■□□□□ 0.34
ABCF3-213ENST00000480539 Q4G0T1 1027 aa17.17■□□□□ 0.34
ABCF3-213ENST00000480539 MCTP1Q6DN14 999 aa17.17■□□□□ 0.34
ABCF3-213ENST00000480539 TRIM50Q86XT4 487 aa17.17■□□□□ 0.34
ABCF3-213ENST00000480539 POTEDQ86YR6 584 aa17.17■□□□□ 0.34
ABCF3-213ENST00000480539 NOSTRINQ8IVI9 506 aa17.17■□□□□ 0.34
ABCF3-213ENST00000480539 C7orf61Q8IZ16 206 aa17.17■□□□□ 0.34
ABCF3-213ENST00000480539 GPR20Q99678 358 aa17.17■□□□□ 0.34
ABCF3-213ENST00000480539 SLC9A2Q9UBY0 812 aa17.17■□□□□ 0.34
ABCF3-213ENST00000480539 ATP11BQ9Y2G3 1177 aa17.17■□□□□ 0.34
ABCF3-213ENST00000480539 NFASCO94856 1347 aa17.17■□□□□ 0.34
ABCF3-213ENST00000480539 CYP3A7-CYP3A51PA0A087WV96 503 aa17.16■□□□□ 0.34
ABCF3-213ENST00000480539 VPS37CA5D8V6 355 aaPredicted RBP17.16■□□□□ 0.34
ABCF3-213ENST00000480539 CABYRO75952 493 aa17.16■□□□□ 0.34
ABCF3-213ENST00000480539 LGALS2P05162 132 aa17.16■□□□□ 0.34
ABCF3-213ENST00000480539 HSP90AA1P07900 732 aaKnown RBP17.16■□□□□ 0.34
ABCF3-213ENST00000480539 HOXD8P13378 290 aaPredicted RBP17.16■□□□□ 0.34
ABCF3-213ENST00000480539 ATP2B1P20020 1258 aa17.16■□□□□ 0.34
ABCF3-213ENST00000480539 CYP3A7P24462 503 aa17.16■□□□□ 0.34
ABCF3-213ENST00000480539 SNX17Q15036 470 aa17.16■□□□□ 0.34
ABCF3-213ENST00000480539 LARP1BQ659C4 914 aaKnown RBP17.16■□□□□ 0.34
ABCF3-213ENST00000480539 MOXD1Q6UVY6 613 aa17.16■□□□□ 0.34
ABCF3-213ENST00000480539 SPRYD3Q8NCJ5 442 aa17.16■□□□□ 0.34
ABCF3-213ENST00000480539 DPF3Q92784 378 aa17.16■□□□□ 0.34
ABCF3-213ENST00000480539 MBOAT7Q96N66 472 aa17.16■□□□□ 0.34
ABCF3-213ENST00000480539 ELP1O95163 1332 aa17.16■□□□□ 0.34
ABCF3-213ENST00000480539 PQBP1O60828 265 aaKnown RBP17.15■□□□□ 0.34
ABCF3-213ENST00000480539 GCFC2P16383 781 aaKnown RBP17.15■□□□□ 0.34
ABCF3-213ENST00000480539 TCF7P36402 384 aaPredicted RBP17.15■□□□□ 0.34
ABCF3-213ENST00000480539 UTP14CQ5TAP6 766 aaKnown RBP17.15■□□□□ 0.34
ABCF3-213ENST00000480539 ETNPPLQ8TBG4 499 aa17.15■□□□□ 0.34
ABCF3-213ENST00000480539 KAT2BQ92831 832 aa17.15■□□□□ 0.34
ABCF3-213ENST00000480539 PCDH10Q9P2E7 1040 aa17.15■□□□□ 0.34
ABCF3-213ENST00000480539 GRIN2DO15399 1336 aa17.15■□□□□ 0.34
ABCF3-213ENST00000480539 TNRC18O15417 2968 aaPredicted RBP17.14■□□□□ 0.33
ABCF3-213ENST00000480539 DHX15O43143 795 aaKnown RBP17.14■□□□□ 0.33
ABCF3-213ENST00000480539 CHMP2AO43633 222 aa17.14■□□□□ 0.33
ABCF3-213ENST00000480539 EVI5O60447 810 aa17.14■□□□□ 0.33
ABCF3-213ENST00000480539 KPNA6O60684 536 aa17.14■□□□□ 0.33
ABCF3-213ENST00000480539 CCNE2O96020 404 aa17.14■□□□□ 0.33
ABCF3-213ENST00000480539 F2P00734 622 aa17.14■□□□□ 0.33
ABCF3-213ENST00000480539 U2AF2P26368 475 aaKnown RBP eCLIP17.14■□□□□ 0.33
ABCF3-213ENST00000480539 PSEN2P49810 448 aa17.14■□□□□ 0.33
ABCF3-213ENST00000480539 ACTR2P61160 394 aa17.14■□□□□ 0.33
ABCF3-213ENST00000480539 ITGA7Q13683 1181 aa17.14■□□□□ 0.33
ABCF3-213ENST00000480539 NBR1Q14596 966 aa17.14■□□□□ 0.33
ABCF3-213ENST00000480539 PPP4R3AQ6IN85 833 aa17.14■□□□□ 0.33
ABCF3-213ENST00000480539 SLC5A5Q92911 643 aa17.14■□□□□ 0.33
ABCF3-213ENST00000480539 NAP1L4Q99733 375 aaKnown RBP17.14■□□□□ 0.33
ABCF3-213ENST00000480539 TCEAL9Q9UHQ7 104 aa17.14■□□□□ 0.33
ABCF3-213ENST00000480539 SCN10AQ9Y5Y9 1956 aa17.14■□□□□ 0.33
ABCF3-213ENST00000480539 GSTTP1A0A1W2PQM5 241 aa17.13■□□□□ 0.33
ABCF3-213ENST00000480539 ARVCFO00192 962 aa17.13■□□□□ 0.33
ABCF3-213ENST00000480539 GAS7O60861 476 aa17.13■□□□□ 0.33
ABCF3-213ENST00000480539 PDCP20941 246 aa17.13■□□□□ 0.33
ABCF3-213ENST00000480539 MFSD10Q14728 455 aa17.13■□□□□ 0.33
ABCF3-213ENST00000480539 NBPF20Q3BBV1 942 aa17.13■□□□□ 0.33
ABCF3-213ENST00000480539 FAM47CQ5HY64 1035 aa17.13■□□□□ 0.33
ABCF3-213ENST00000480539 LRCH2Q5VUJ6 765 aa17.13■□□□□ 0.33
ABCF3-213ENST00000480539 SEPT1Q8WYJ6 367 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms