RNA–Protein interactions for RNA: ENST00000480484.5

COMMD4-203, Transcript of COMM domain containing 4, humanhuman

TSL 1 (best)

Gene COMMD4, Length 3,225 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-203ENST00000480484 ESYT3A0FGR9 886 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 E7EVH7 732 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 H3BRB1 525 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 GUCY2FP51841 1108 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 EPHB4P54760 987 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 SF3A3Q12874 501 aaKnown RBP eCLIP11.18□□□□□ -0.62
COMMD4-203ENST00000480484 E2F5Q15329 346 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 FAM98CQ17RN3 349 aaKnown RBP11.18□□□□□ -0.62
COMMD4-203ENST00000480484 PARP10Q53GL7 1025 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 CFAP58Q5T655 872 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 NFRKBQ6P4R8 1299 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 IRF2BP1Q8IU81 584 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 ZNF473Q8WTR7 871 aaKnown RBP11.18□□□□□ -0.62
COMMD4-203ENST00000480484 CELF1Q92879 486 aaKnown RBP11.18□□□□□ -0.62
COMMD4-203ENST00000480484 TUT1Q9H6E5 874 aaKnown RBP11.18□□□□□ -0.62
COMMD4-203ENST00000480484 LRWD1Q9UFC0 647 aa11.18□□□□□ -0.62
COMMD4-203ENST00000480484 MYH10P35580 1976 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 ZSCAN5CA6NGD5 496 aaPredicted RBP11.17□□□□□ -0.62
COMMD4-203ENST00000480484 LRRC10BA6NIK2 292 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 DEXIO95424 95 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 POU5F1Q01860 360 aaKnown RBP11.17□□□□□ -0.62
COMMD4-203ENST00000480484 MTMR3Q13615 1198 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 FAM47AQ5JRC9 791 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 SH3RF1Q7Z6J0 888 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 CCDC13Q8IYE1 715 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 KIRREL3Q8IZU9 778 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 ZNF384Q8TF68 577 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 MLXIPQ9HAP2 919 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 B4DLN1 442 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 NEBLO76041 1014 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 SKOR1P84550 965 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 PTGDRQ13258 359 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 TRADDQ15628 312 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 NPY5RQ15761 445 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 C8orf74Q6P047 294 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 IQCA1Q86XH1 822 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 CREG2Q8IUH2 290 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 GPKOWQ92917 476 aaPredicted RBP eCLIP11.17□□□□□ -0.62
COMMD4-203ENST00000480484 EPN3Q9H201 632 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 STIM2Q9P246 746 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 SRP68Q9UHB9 627 aaKnown RBP11.17□□□□□ -0.62
COMMD4-203ENST00000480484 MYH2Q9UKX2 1941 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 STK36Q9NRP7 1315 aa11.17□□□□□ -0.62
COMMD4-203ENST00000480484 MOCS3O95396 460 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 PRCPP42785 496 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 DDR1Q08345 913 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 WTAPQ15007 396 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 SPA17Q15506 151 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 PIK3AP1Q6ZUJ8 805 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 TMC4Q7Z404 712 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 ZNF654Q8IZM8 581 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 RASSF8Q8NHQ8 419 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 CEP63Q96MT8 703 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 CCT8L2Q96SF2 557 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 DNAJC7Q99615 494 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 MUC3BQ9H195 1237 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 NFU1Q9UMS0 254 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 SNX12Q9UMY4 172 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 CAPN6Q9Y6Q1 641 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 ERICH2A1L162 156 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 NCK2O43639 380 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 PDHBP11177 359 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 VAV2P52735 878 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 ALS2CLQ60I27 953 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 TBC1D9BQ66K14 1250 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 AMIGO3Q86WK7 504 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 TRIM47Q96LD4 638 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.16□□□□□ -0.62
COMMD4-203ENST00000480484 BRINP2Q9C0B6 783 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 AS3MTQ9HBK9 375 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 SLC40A1Q9NP59 571 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 MCM8Q9UJA3 840 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 GOLGA6L7A0A1B0GV03 622 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 ANO9A1A5B4 782 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 RASSF10A6NK89 507 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 TACC1O75410 805 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 NR1D1P20393 614 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 OSBPP22059 807 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 LIFRP42702 1097 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 RNASE9P60153 205 aaKnown RBP11.16□□□□□ -0.62
COMMD4-203ENST00000480484 EMBQ6PCB8 327 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 CCDC121Q6ZUS5 278 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 MAATS1Q7Z4T9 603 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 NLRP14Q86W24 1093 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 MMGT1Q8N4V1 131 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 FANCBQ8NB91 859 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 CCDC42Q96M95 316 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 UBAC1Q9BSL1 405 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 CAPN11Q9UMQ6 739 aa11.16□□□□□ -0.62
COMMD4-203ENST00000480484 EPHB6O15197 1021 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 CYP2D6P10635 497 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 PAX7P23759 505 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 PAFAH1B1P43034 410 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 PODNQ7Z5L7 613 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 SPATS2Q86XZ4 545 aaKnown RBP11.15□□□□□ -0.62
COMMD4-203ENST00000480484 CCDC155Q8N6L0 562 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 MIEF2Q96C03 454 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 VCPKMTQ9H867 229 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 PPCSQ9HAB8 311 aa11.15□□□□□ -0.62
COMMD4-203ENST00000480484 TFCP2L1Q9NZI6 479 aa11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms