RNA–Protein interactions for RNA: ENST00000479988.1

CPS1-207, Transcript of carbamoyl-phosphate synthase 1, humanhuman

TSL 1 (best)

Gene CPS1, Length 4,811 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPS1-207ENST00000479988 AOC2O75106 756 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 STAG3L1P0CL83 205 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 PTPREP23469 700 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 ERCC5P28715 1186 aaPredicted RBP6.58□□□□□ -1.36
CPS1-207ENST00000479988 FLT3LGP49771 235 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 ZNF280AP59817 542 aaPredicted RBP6.58□□□□□ -1.36
CPS1-207ENST00000479988 GPS2Q13227 327 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 SNW1Q13573 536 aaKnown RBP6.58□□□□□ -1.36
CPS1-207ENST00000479988 CCDC70Q6NSX1 233 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 APOBEC3HQ6NTF7 200 aaKnown RBP6.58□□□□□ -1.36
CPS1-207ENST00000479988 METTL23Q86XA0 190 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 L3MBTL3Q96JM7 780 aaPredicted RBP6.58□□□□□ -1.36
CPS1-207ENST00000479988 CLMNQ96JQ2 1002 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 PLIN2Q99541 437 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 APBA2Q99767 749 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 SENP6Q9GZR1 1112 aaPredicted RBP6.58□□□□□ -1.36
CPS1-207ENST00000479988 ABHD16BQ9H3Z7 469 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 PPP1R9AQ9ULJ8 1098 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 PRR12Q9ULL5 1215 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 PHLPP2Q6ZVD8 1323 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 LAD1O00515 517 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 POLR2DO15514 142 aaKnown RBP6.58□□□□□ -1.36
CPS1-207ENST00000479988 CABYRO75952 493 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 KRT19P08727 400 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 FDPSP14324 419 aaKnown RBP6.58□□□□□ -1.36
CPS1-207ENST00000479988 AFMP43652 599 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 ARHGAP4P98171 946 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 PPFIA1Q13136 1202 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 FAM110CQ1W6H9 321 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 PPP1R18Q6NYC8 613 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 FAM117BQ6P1L5 589 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 ZNF354CQ86Y25 554 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 DHX58Q96C10 678 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 KLRG1Q96E93 195 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 P2RX7Q99572 595 aaKnown RBP6.58□□□□□ -1.36
CPS1-207ENST00000479988 SH3GLB2Q9NR46 395 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 KCNJ14Q9UNX9 436 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 AFDNP55196 1824 aaKnown RBP6.58□□□□□ -1.36
CPS1-207ENST00000479988 NKRFO15226 690 aaKnown RBP eCLIP6.58□□□□□ -1.36
CPS1-207ENST00000479988 PRPF6O94906 941 aaKnown RBP6.58□□□□□ -1.36
CPS1-207ENST00000479988 SNX16P57768 344 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 ACER1Q8TDN7 264 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 C16orf45Q96MC5 204 aaPredicted RBP6.58□□□□□ -1.36
CPS1-207ENST00000479988 NLRP4Q96MN2 994 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 MAP3K14Q99558 947 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 CCDC94Q9BW85 323 aaPredicted RBP6.58□□□□□ -1.36
CPS1-207ENST00000479988 GCOM2Q9BZD3 368 aaPredicted RBP6.58□□□□□ -1.36
CPS1-207ENST00000479988 TMX2Q9Y320 296 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 RGPD5Q99666 1765 aa6.58□□□□□ -1.36
CPS1-207ENST00000479988 DTNBO60941 627 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 HOXC6P09630 235 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 OR52Z1P0C646 297 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 SFNP31947 248 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 PHKA2P46019 1235 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 CYP4A11Q02928 519 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 ZNF543Q08ER8 600 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 HERC4Q5GLZ8 1057 aaPredicted RBP6.57□□□□□ -1.36
CPS1-207ENST00000479988 RUFY4Q6ZNE9 571 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 SESTD1Q86VW0 696 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 SLC17A8Q8NDX2 589 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 SHCBP1Q8NEM2 672 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 GSDMAQ96QA5 445 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 GBP3Q9H0R5 595 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 SMARCAD1Q9H4L7 1026 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 HPS5Q9UPZ3 1129 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 INPP5FQ9Y2H2 1132 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 COL18A1P39060 1754 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 NEDD4P46934 1319 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 TCRBV5S4A2TA0A5A2 114 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 UPP2O95045 317 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 MYL1P05976 194 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 NR3C2P08235 984 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 PRKAR2AP13861 404 aaKnown RBP6.57□□□□□ -1.36
CPS1-207ENST00000479988 IGFBP4P22692 258 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 RESP18Q5W5W9 173 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 TMEM199Q8N511 208 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 SLITRK6Q9H5Y7 841 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 MAGEF1Q9HAY2 307 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 CGNQ9P2M7 1197 aaKnown RBP6.57□□□□□ -1.36
CPS1-207ENST00000479988 PCDHA6Q9UN73 950 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 PCDHA8Q9Y5H6 950 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 C10orf71Q711Q0 1435 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 NWD2Q9ULI1 1742 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 LAMB4A4D0S4 1761 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 YDJCA8MPS7 323 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 USO1O60763 962 aaKnown RBP6.57□□□□□ -1.36
CPS1-207ENST00000479988 ADORA2AP29274 412 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 LONP1P36776 959 aaKnown RBP6.57□□□□□ -1.36
CPS1-207ENST00000479988 MAP2K5Q13163 448 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 TRIM14Q14142 442 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 ARL6IP4Q66PJ3 421 aaKnown RBP6.57□□□□□ -1.36
CPS1-207ENST00000479988 XRRA1Q6P2D8 792 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 ELMOD1Q8N336 334 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 ENGASEQ8NFI3 743 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 SEPT1Q8WYJ6 367 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 FERMT1Q9BQL6 677 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 ZNF302Q9NR11 478 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 TOPORSQ9NS56 1045 aaPredicted RBP6.57□□□□□ -1.36
CPS1-207ENST00000479988 PCDHB13Q9Y5F0 798 aa6.57□□□□□ -1.36
CPS1-207ENST00000479988 TNNC2P02585 160 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms