RNA–Protein interactions for RNA: ENST00000479625.1

GPNMB-211, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 788 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-211ENST00000479625 DNERQ8NFT8 737 aa11.42□□□□□ -0.58
GPNMB-211ENST00000479625 MPHOSPH6Q99547 160 aaKnown RBP11.42□□□□□ -0.58
GPNMB-211ENST00000479625 OSBPL7Q9BZF2 842 aa11.42□□□□□ -0.58
GPNMB-211ENST00000479625 COL20A1Q9P218 1284 aa11.42□□□□□ -0.58
GPNMB-211ENST00000479625 CTNNA3Q9UI47 895 aa11.42□□□□□ -0.58
GPNMB-211ENST00000479625 SPTBN4Q9H254 2564 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 MBTPS2O43462 519 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 SORBS3O60504 671 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 TBX10O75333 385 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 F2P00734 622 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 NOVP48745 357 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 KIAA0753Q2KHM9 967 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 FBXO11Q86XK2 927 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 RNF135Q8IUD6 432 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 TBC1D5Q92609 795 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 MFSD14AQ96MC6 490 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 YME1L1Q96TA2 773 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 CPVLQ9H3G5 476 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 FAM86C1Q9NVL1 165 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 DDX19BQ9UMR2 479 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 FAM50BQ9Y247 325 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 DCHS1Q96JQ0 3298 aa11.41□□□□□ -0.58
GPNMB-211ENST00000479625 WDR19Q8NEZ3 1342 aa11.4□□□□□ -0.58
GPNMB-211ENST00000479625 CCER2I3L3R5 266 aa11.4□□□□□ -0.58
GPNMB-211ENST00000479625 HAS3O00219 553 aa11.4□□□□□ -0.58
GPNMB-211ENST00000479625 LINC01565O15544 149 aa11.4□□□□□ -0.58
GPNMB-211ENST00000479625 PDHBP11177 359 aa11.4□□□□□ -0.58
GPNMB-211ENST00000479625 CASTP20810 708 aaKnown RBP11.4□□□□□ -0.58
GPNMB-211ENST00000479625 GTF2F1P35269 517 aaKnown RBP eCLIP11.4□□□□□ -0.58
GPNMB-211ENST00000479625 HYAL1Q12794 435 aa11.4□□□□□ -0.58
GPNMB-211ENST00000479625 SMAD2Q15796 467 aaKnown RBP11.4□□□□□ -0.58
GPNMB-211ENST00000479625 DGKDQ16760 1214 aa11.4□□□□□ -0.58
GPNMB-211ENST00000479625 HERC4Q5GLZ8 1057 aaPredicted RBP11.4□□□□□ -0.58
GPNMB-211ENST00000479625 TMEM192Q8IY95 271 aa11.4□□□□□ -0.58
GPNMB-211ENST00000479625 SAMD11Q96NU1 681 aa11.4□□□□□ -0.58
GPNMB-211ENST00000479625 TAAR1Q96RJ0 339 aa11.4□□□□□ -0.58
GPNMB-211ENST00000479625 TMEM47Q9BQJ4 181 aa11.4□□□□□ -0.58
GPNMB-211ENST00000479625 LOXHD1Q8IVV2 1947 aa11.4□□□□□ -0.58
GPNMB-211ENST00000479625 ZFHX2Q9C0A1 2572 aaPredicted RBP11.39□□□□□ -0.59
GPNMB-211ENST00000479625 EMSYQ7Z589 1322 aa11.39□□□□□ -0.59
GPNMB-211ENST00000479625 LOC101059915A0A1B0GWI6 518 aaPredicted RBP11.39□□□□□ -0.59
GPNMB-211ENST00000479625 DPYSL4O14531 572 aa11.39□□□□□ -0.59
GPNMB-211ENST00000479625 CTSHP09668 335 aa11.39□□□□□ -0.59
GPNMB-211ENST00000479625 TOP1P11387 765 aaKnown RBP11.39□□□□□ -0.59
GPNMB-211ENST00000479625 CTNNB1P35222 781 aa11.39□□□□□ -0.59
GPNMB-211ENST00000479625 THPOP40225 353 aa11.39□□□□□ -0.59
GPNMB-211ENST00000479625 HNRNPUQ00839 825 aaKnown RBP eCLIP11.39□□□□□ -0.59
GPNMB-211ENST00000479625 TCF15Q12870 199 aa11.39□□□□□ -0.59
GPNMB-211ENST00000479625 CTC1Q2NKJ3 1217 aa11.39□□□□□ -0.59
GPNMB-211ENST00000479625 PLEKHG4Q58EX7 1191 aa11.39□□□□□ -0.59
GPNMB-211ENST00000479625 RRP12Q5JTH9 1297 aaKnown RBP11.39□□□□□ -0.59
GPNMB-211ENST00000479625 ZMYM1Q5SVZ6 1142 aa11.39□□□□□ -0.59
GPNMB-211ENST00000479625 VPS53Q5VIR6 699 aa11.39□□□□□ -0.59
GPNMB-211ENST00000479625 DHX37Q8IY37 1157 aaKnown RBP11.39□□□□□ -0.59
GPNMB-211ENST00000479625 FSD1Q9BTV5 496 aa11.39□□□□□ -0.59
GPNMB-211ENST00000479625 KATNAL1Q9BW62 490 aa11.39□□□□□ -0.59
GPNMB-211ENST00000479625 UPF3BQ9BZI7 483 aaKnown RBP11.39□□□□□ -0.59
GPNMB-211ENST00000479625 TOMM22Q9NS69 142 aa11.39□□□□□ -0.59
GPNMB-211ENST00000479625 ZDBF2Q9HCK1 2354 aa11.38□□□□□ -0.59
GPNMB-211ENST00000479625 RSPH10B2B2RC85 870 aa11.38□□□□□ -0.59
GPNMB-211ENST00000479625 TK2O00142 265 aa11.38□□□□□ -0.59
GPNMB-211ENST00000479625 GRM6O15303 877 aa11.38□□□□□ -0.59
GPNMB-211ENST00000479625 RSPH10BP0C881 870 aa11.38□□□□□ -0.59
GPNMB-211ENST00000479625 GOLGA8HP0CJ92 632 aa11.38□□□□□ -0.59
GPNMB-211ENST00000479625 PTPN5P54829 565 aa11.38□□□□□ -0.59
GPNMB-211ENST00000479625 ZNF543Q08ER8 600 aa11.38□□□□□ -0.59
GPNMB-211ENST00000479625 SERINC5Q86VE9 423 aa11.38□□□□□ -0.59
GPNMB-211ENST00000479625 SYTL5Q8TDW5 730 aaPredicted RBP11.38□□□□□ -0.59
GPNMB-211ENST00000479625 EDAQ92838 391 aa11.38□□□□□ -0.59
GPNMB-211ENST00000479625 TOP1MTQ969P6 601 aa11.38□□□□□ -0.59
GPNMB-211ENST00000479625 GPATCH3Q96I76 525 aa11.38□□□□□ -0.59
GPNMB-211ENST00000479625 POP1Q99575 1024 aaKnown RBP11.38□□□□□ -0.59
GPNMB-211ENST00000479625 IFIH1Q9BYX4 1025 aaKnown RBP11.38□□□□□ -0.59
GPNMB-211ENST00000479625 DDX41Q9UJV9 622 aaKnown RBP11.38□□□□□ -0.59
GPNMB-211ENST00000479625 TMEM221A6NGB7 291 aa11.37□□□□□ -0.59
GPNMB-211ENST00000479625 B4DLN1 442 aa11.37□□□□□ -0.59
GPNMB-211ENST00000479625 M0R296 226 aa11.37□□□□□ -0.59
GPNMB-211ENST00000479625 STXBP3O00186 592 aa11.37□□□□□ -0.59
GPNMB-211ENST00000479625 ORC4O43929 436 aa11.37□□□□□ -0.59
GPNMB-211ENST00000479625 GFRA3O60609 400 aa11.37□□□□□ -0.59
GPNMB-211ENST00000479625 LINC00271P0C7V0 271 aa11.37□□□□□ -0.59
GPNMB-211ENST00000479625 EIF2AK2P19525 551 aaKnown RBP11.37□□□□□ -0.59
GPNMB-211ENST00000479625 MRPL12P52815 198 aaKnown RBP11.37□□□□□ -0.59
GPNMB-211ENST00000479625 SMAD4Q13485 552 aaKnown RBP11.37□□□□□ -0.59
GPNMB-211ENST00000479625 STXBP2Q15833 593 aa11.37□□□□□ -0.59
GPNMB-211ENST00000479625 ZDHHC16Q969W1 377 aa11.37□□□□□ -0.59
GPNMB-211ENST00000479625 EMID1Q96A84 441 aaPredicted RBP11.37□□□□□ -0.59
GPNMB-211ENST00000479625 PBXIP1Q96AQ6 731 aa11.37□□□□□ -0.59
GPNMB-211ENST00000479625 ADAM33Q9BZ11 813 aa11.37□□□□□ -0.59
GPNMB-211ENST00000479625 IGFLR1Q9H665 355 aa11.37□□□□□ -0.59
GPNMB-211ENST00000479625 ALG13Q9NP73 1137 aaKnown RBP11.37□□□□□ -0.59
GPNMB-211ENST00000479625 ANAPC4Q9UJX5 808 aa11.37□□□□□ -0.59
GPNMB-211ENST00000479625 MRVI1Q9Y6F6 885 aa11.37□□□□□ -0.59
GPNMB-211ENST00000479625 WDR87Q6ZQQ6 2873 aa11.37□□□□□ -0.59
GPNMB-211ENST00000479625 SNHG28P0DPA3 235 aa11.36□□□□□ -0.59
GPNMB-211ENST00000479625 VCPP55072 806 aaKnown RBP11.36□□□□□ -0.59
GPNMB-211ENST00000479625 CDC37Q16543 378 aaPredicted RBP11.36□□□□□ -0.59
GPNMB-211ENST00000479625 HSDL1Q3SXM5 330 aa11.36□□□□□ -0.59
GPNMB-211ENST00000479625 TRIM67Q6ZTA4 783 aa11.36□□□□□ -0.59
GPNMB-211ENST00000479625 BMP8AQ7Z5Y6 402 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms