RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 TRIM71Q2Q1W2 868 aaKnown RBP16.47■□□□□ 0.23
ATG4B-218ENST00000479554 CNKSR3Q6P9H4 555 aa16.47■□□□□ 0.23
ATG4B-218ENST00000479554 APOA5Q6Q788 366 aa16.47■□□□□ 0.23
ATG4B-218ENST00000479554 HEATR3Q7Z4Q2 680 aa16.47■□□□□ 0.23
ATG4B-218ENST00000479554 NLRX1Q86UT6 975 aa16.47■□□□□ 0.23
ATG4B-218ENST00000479554 HERC6Q8IVU3 1022 aa16.47■□□□□ 0.23
ATG4B-218ENST00000479554 TUT1Q9H6E5 874 aaKnown RBP16.47■□□□□ 0.23
ATG4B-218ENST00000479554 RBM28Q9NW13 759 aaKnown RBP16.47■□□□□ 0.23
ATG4B-218ENST00000479554 SPTBN5Q9NRC6 3674 aaKnown RBP16.46■□□□□ 0.23
ATG4B-218ENST00000479554 C17orf102A2RUQ5 167 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 SPDYE3A6NKU9 549 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 KIF28PB7ZC32 967 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 NBNO60934 754 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 CXCL10P02778 98 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 ADGRE1Q14246 886 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 HIC1Q14526 733 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 KRT32Q14532 448 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 GPNMBQ14956 572 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 ZNF618Q5T7W0 954 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 DHX32Q7L7V1 743 aaKnown RBP16.46■□□□□ 0.23
ATG4B-218ENST00000479554 PPM1EQ8WY54 764 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 ATP6V0A1Q93050 837 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 WNT8BQ93098 351 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 TCEANC2Q96MN5 208 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 GPR20Q99678 358 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 SENP7Q9BQF6 1050 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 USP26Q9BXU7 913 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 TET1Q8NFU7 2136 aa16.46■□□□□ 0.23
ATG4B-218ENST00000479554 DOCK5Q9H7D0 1870 aa16.46■□□□□ 0.22
ATG4B-218ENST00000479554 CNTNAP5Q8WYK1 1306 aa16.45■□□□□ 0.22
ATG4B-218ENST00000479554 REV3LO60673 3130 aa16.45■□□□□ 0.22
ATG4B-218ENST00000479554 ZBTB43O43298 467 aa16.45■□□□□ 0.22
ATG4B-218ENST00000479554 SMIM10L2AP0DMW4 78 aa16.45■□□□□ 0.22
ATG4B-218ENST00000479554 SMIM10L2BP0DMW5 78 aa16.45■□□□□ 0.22
ATG4B-218ENST00000479554 WDR5P61964 334 aaKnown RBP16.45■□□□□ 0.22
ATG4B-218ENST00000479554 EXOSC10Q01780 885 aaKnown RBP16.45■□□□□ 0.22
ATG4B-218ENST00000479554 SP4Q02446 784 aa16.45■□□□□ 0.22
ATG4B-218ENST00000479554 RTN1Q16799 776 aa16.45■□□□□ 0.22
ATG4B-218ENST00000479554 ADCK5Q3MIX3 580 aa16.45■□□□□ 0.22
ATG4B-218ENST00000479554 TSGA10IPQ3SY00 556 aa16.45■□□□□ 0.22
ATG4B-218ENST00000479554 SERINC5Q86VE9 423 aa16.45■□□□□ 0.22
ATG4B-218ENST00000479554 TRIM50Q86XT4 487 aa16.45■□□□□ 0.22
ATG4B-218ENST00000479554 RASEFQ8IZ41 740 aa16.45■□□□□ 0.22
ATG4B-218ENST00000479554 GIMAP8Q8ND71 665 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-218ENST00000479554 GPRASP2Q96D09 838 aa16.45■□□□□ 0.22
ATG4B-218ENST00000479554 CDHR1Q96JP9 859 aa16.45■□□□□ 0.22
ATG4B-218ENST00000479554 EHMT1Q9H9B1 1298 aa16.45■□□□□ 0.22
ATG4B-218ENST00000479554 ZNF215Q9UL58 517 aaPredicted RBP16.45■□□□□ 0.22
ATG4B-218ENST00000479554 HOXC8P31273 242 aa16.44■□□□□ 0.22
ATG4B-218ENST00000479554 THPOP40225 353 aa16.44■□□□□ 0.22
ATG4B-218ENST00000479554 UTP14CQ5TAP6 766 aaKnown RBP16.44■□□□□ 0.22
ATG4B-218ENST00000479554 TRAF7Q6Q0C0 670 aa16.44■□□□□ 0.22
ATG4B-218ENST00000479554 BRPF3Q9ULD4 1205 aa16.44■□□□□ 0.22
ATG4B-218ENST00000479554 EMSYQ7Z589 1322 aa16.44■□□□□ 0.22
ATG4B-218ENST00000479554 PTPRSQ13332 1948 aa16.43■□□□□ 0.22
ATG4B-218ENST00000479554 KLF18A0A0U1RQI7 1052 aa16.43■□□□□ 0.22
ATG4B-218ENST00000479554 ABHD14A-ACY1A0A1B0GW23 586 aa16.43■□□□□ 0.22
ATG4B-218ENST00000479554 GOLGA8AA7E2F4 631 aa16.43■□□□□ 0.22
ATG4B-218ENST00000479554 GOLGA8BA8MQT2 603 aa16.43■□□□□ 0.22
ATG4B-218ENST00000479554 TLL1O43897 1013 aa16.43■□□□□ 0.22
ATG4B-218ENST00000479554 EFCAB14O75071 495 aa16.43■□□□□ 0.22
ATG4B-218ENST00000479554 HMGB1P09429 215 aaKnown RBP16.43■□□□□ 0.22
ATG4B-218ENST00000479554 GNAT1P11488 350 aa16.43■□□□□ 0.22
ATG4B-218ENST00000479554 ITGB5P18084 799 aa16.43■□□□□ 0.22
ATG4B-218ENST00000479554 NAPAP54920 295 aa16.43■□□□□ 0.22
ATG4B-218ENST00000479554 CCDC85BQ15834 202 aaPredicted RBP16.43■□□□□ 0.22
ATG4B-218ENST00000479554 WWC2Q6AWC2 1192 aa16.43■□□□□ 0.22
ATG4B-218ENST00000479554 PPP1R18Q6NYC8 613 aa16.43■□□□□ 0.22
ATG4B-218ENST00000479554 RNPEPQ9H4A4 650 aa16.43■□□□□ 0.22
ATG4B-218ENST00000479554 PCDHA6Q9UN73 950 aa16.43■□□□□ 0.22
ATG4B-218ENST00000479554 TELO2Q9Y4R8 837 aa16.43■□□□□ 0.22
ATG4B-218ENST00000479554 PCDHA8Q9Y5H6 950 aa16.43■□□□□ 0.22
ATG4B-218ENST00000479554 RSPH10B2B2RC85 870 aa16.42■□□□□ 0.22
ATG4B-218ENST00000479554 TREHO43280 583 aa16.42■□□□□ 0.22
ATG4B-218ENST00000479554 LGR5O75473 907 aa16.42■□□□□ 0.22
ATG4B-218ENST00000479554 RSPH10BP0C881 870 aa16.42■□□□□ 0.22
ATG4B-218ENST00000479554 KCNA2P16389 499 aa16.42■□□□□ 0.22
ATG4B-218ENST00000479554 DEFB103AP81534 67 aa16.42■□□□□ 0.22
ATG4B-218ENST00000479554 FGD1P98174 961 aa16.42■□□□□ 0.22
ATG4B-218ENST00000479554 MTMR1Q13613 665 aa16.42■□□□□ 0.22
ATG4B-218ENST00000479554 IKBKEQ14164 716 aa16.42■□□□□ 0.22
ATG4B-218ENST00000479554 MBTPS1Q14703 1052 aa16.42■□□□□ 0.22
ATG4B-218ENST00000479554 TCTN1Q2MV58 587 aa16.42■□□□□ 0.22
ATG4B-218ENST00000479554 ZBED2Q9BTP6 218 aa16.42■□□□□ 0.22
ATG4B-218ENST00000479554 CERS4Q9HA82 394 aa16.42■□□□□ 0.22
ATG4B-218ENST00000479554 NAP1L2Q9ULW6 460 aaPredicted RBP16.42■□□□□ 0.22
ATG4B-218ENST00000479554 UBIAD1Q9Y5Z9 338 aa16.42■□□□□ 0.22
ATG4B-218ENST00000479554 hCG_1984214I3L0E3 225 aa16.41■□□□□ 0.22
ATG4B-218ENST00000479554 ATP9AO75110 1047 aa16.41■□□□□ 0.22
ATG4B-218ENST00000479554 CAND2O75155 1236 aa16.41■□□□□ 0.22
ATG4B-218ENST00000479554 ARHGEF15O94989 841 aa16.41■□□□□ 0.22
ATG4B-218ENST00000479554 TCF7P36402 384 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-218ENST00000479554 ADCY7P51828 1080 aa16.41■□□□□ 0.22
ATG4B-218ENST00000479554 TAP1Q03518 808 aa16.41■□□□□ 0.22
ATG4B-218ENST00000479554 TMCO2Q7Z6W1 182 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-218ENST00000479554 MICALL1Q8N3F8 863 aa16.41■□□□□ 0.22
ATG4B-218ENST00000479554 ZNF713Q8N859 430 aaPredicted RBP16.41■□□□□ 0.22
ATG4B-218ENST00000479554 ARNTL2Q8WYA1 636 aa16.41■□□□□ 0.22
ATG4B-218ENST00000479554 RIC8AQ9NPQ8 531 aa16.41■□□□□ 0.22
ATG4B-218ENST00000479554 JADE2Q9NQC1 790 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms