RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 KRT25Q7Z3Z0 450 aa17.62■□□□□ 0.41
C9orf3-217ENST00000479161 AIFM3Q96NN9 605 aa17.62■□□□□ 0.41
C9orf3-217ENST00000479161 PRO3102Q9H379 93 aa17.62■□□□□ 0.41
C9orf3-217ENST00000479161 PDLIM7Q9NR12 457 aa17.62■□□□□ 0.41
C9orf3-217ENST00000479161 PRKAG2Q9UGJ0 569 aa17.62■□□□□ 0.41
C9orf3-217ENST00000479161 FAM86B1E9PN63 330 aa17.61■□□□□ 0.41
C9orf3-217ENST00000479161 ADAMTS3O15072 1205 aa17.61■□□□□ 0.41
C9orf3-217ENST00000479161 ATP9AO75110 1047 aa17.61■□□□□ 0.41
C9orf3-217ENST00000479161 MYL3P08590 195 aa17.61■□□□□ 0.41
C9orf3-217ENST00000479161 FAM86B2P0C5J1 330 aa17.61■□□□□ 0.41
C9orf3-217ENST00000479161 SUPT20HL2P0C7V6 817 aa17.61■□□□□ 0.41
C9orf3-217ENST00000479161 ZNF76P36508 570 aa17.61■□□□□ 0.41
C9orf3-217ENST00000479161 FAAP100Q0VG06 881 aa17.61■□□□□ 0.41
C9orf3-217ENST00000479161 CYFIP1Q7L576 1253 aa17.61■□□□□ 0.41
C9orf3-217ENST00000479161 KAT2BQ92831 832 aa17.61■□□□□ 0.41
C9orf3-217ENST00000479161 ZFP91Q96JP5 570 aaPredicted RBP17.61■□□□□ 0.41
C9orf3-217ENST00000479161 GPR20Q99678 358 aa17.61■□□□□ 0.41
C9orf3-217ENST00000479161 GDF15Q99988 308 aa17.61■□□□□ 0.41
C9orf3-217ENST00000479161 TBX21Q9UL17 535 aa17.61■□□□□ 0.41
C9orf3-217ENST00000479161 KAT6AQ92794 2004 aa17.6■□□□□ 0.41
C9orf3-217ENST00000479161 RANBP2P49792 3224 aaKnown RBP17.6■□□□□ 0.41
C9orf3-217ENST00000479161 A0A1W2PPC1 479 aa17.6■□□□□ 0.41
C9orf3-217ENST00000479161 NOP56O00567 594 aaKnown RBP17.6■□□□□ 0.41
C9orf3-217ENST00000479161 NBPF20Q3BBV1 942 aa17.6■□□□□ 0.41
C9orf3-217ENST00000479161 CYP2W1Q8TAV3 490 aa17.6■□□□□ 0.41
C9orf3-217ENST00000479161 SEPT1Q8WYJ6 367 aa17.6■□□□□ 0.41
C9orf3-217ENST00000479161 PGBD1Q96JS3 809 aa17.6■□□□□ 0.41
C9orf3-217ENST00000479161 MBOAT7Q96N66 472 aa17.6■□□□□ 0.41
C9orf3-217ENST00000479161 C16orf70Q9BSU1 422 aa17.6■□□□□ 0.41
C9orf3-217ENST00000479161 AGO4Q9HCK5 861 aaKnown RBP17.6■□□□□ 0.41
C9orf3-217ENST00000479161 BRMS1Q9HCU9 246 aa17.6■□□□□ 0.41
C9orf3-217ENST00000479161 TBC1D22BQ9NU19 505 aa17.6■□□□□ 0.41
C9orf3-217ENST00000479161 LTBP2Q14767 1821 aa17.6■□□□□ 0.41
C9orf3-217ENST00000479161 EDIL3O43854 480 aa17.59■□□□□ 0.41
C9orf3-217ENST00000479161 JAK2O60674 1132 aa17.59■□□□□ 0.41
C9orf3-217ENST00000479161 PQBP1O60828 265 aaKnown RBP17.59■□□□□ 0.41
C9orf3-217ENST00000479161 NONOQ15233 471 aaKnown RBP eCLIP17.59■□□□□ 0.41
C9orf3-217ENST00000479161 Q4G0T1 1027 aa17.59■□□□□ 0.41
C9orf3-217ENST00000479161 PLA2G4DQ86XP0 818 aa17.59■□□□□ 0.41
C9orf3-217ENST00000479161 CCDC83Q8IWF9 413 aa17.59■□□□□ 0.41
C9orf3-217ENST00000479161 RASGRP4Q8TDF6 673 aa17.59■□□□□ 0.41
C9orf3-217ENST00000479161 TBCKQ8TEA7 893 aa17.59■□□□□ 0.41
C9orf3-217ENST00000479161 NAP1L4Q99733 375 aaKnown RBP17.59■□□□□ 0.41
C9orf3-217ENST00000479161 SDF4Q9BRK5 362 aa17.59■□□□□ 0.41
C9orf3-217ENST00000479161 KCNJ14Q9UNX9 436 aa17.59■□□□□ 0.41
C9orf3-217ENST00000479161 H3BRB1 525 aa17.58■□□□□ 0.4
C9orf3-217ENST00000479161 IPO5O00410 1097 aaKnown RBP17.58■□□□□ 0.4
C9orf3-217ENST00000479161 ATG7O95352 703 aa17.58■□□□□ 0.4
C9orf3-217ENST00000479161 MMP1P03956 469 aa17.58■□□□□ 0.4
C9orf3-217ENST00000479161 ARP10275 920 aa17.58■□□□□ 0.4
C9orf3-217ENST00000479161 GCFC2P16383 781 aaKnown RBP17.58■□□□□ 0.4
C9orf3-217ENST00000479161 HOXC8P31273 242 aa17.58■□□□□ 0.4
C9orf3-217ENST00000479161 TRIM29Q14134 588 aa17.58■□□□□ 0.4
C9orf3-217ENST00000479161 PPP4R3AQ6IN85 833 aa17.58■□□□□ 0.4
C9orf3-217ENST00000479161 LENG9Q96B70 501 aa17.58■□□□□ 0.4
C9orf3-217ENST00000479161 TMX3Q96JJ7 454 aa17.58■□□□□ 0.4
C9orf3-217ENST00000479161 TUT1Q9H6E5 874 aaKnown RBP17.58■□□□□ 0.4
C9orf3-217ENST00000479161 BCAS3Q9H6U6 928 aa17.58■□□□□ 0.4
C9orf3-217ENST00000479161 JPH1Q9HDC5 661 aaPredicted RBP17.58■□□□□ 0.4
C9orf3-217ENST00000479161 TMEM39AQ9NV64 488 aa17.58■□□□□ 0.4
C9orf3-217ENST00000479161 SLC9A2Q9UBY0 812 aa17.58■□□□□ 0.4
C9orf3-217ENST00000479161 KIF3AQ9Y496 699 aa17.58■□□□□ 0.4
C9orf3-217ENST00000479161 EMSYQ7Z589 1322 aa17.57■□□□□ 0.4
C9orf3-217ENST00000479161 CCDC194A0A1B0GVG4 234 aa17.57■□□□□ 0.4
C9orf3-217ENST00000479161 TRIM43BA6NCK2 446 aa17.57■□□□□ 0.4
C9orf3-217ENST00000479161 DHX15O43143 795 aaKnown RBP17.57■□□□□ 0.4
C9orf3-217ENST00000479161 TIMP1P01033 207 aa17.57■□□□□ 0.4
C9orf3-217ENST00000479161 LGALS2P05162 132 aa17.57■□□□□ 0.4
C9orf3-217ENST00000479161 KRT2P35908 639 aa17.57■□□□□ 0.4
C9orf3-217ENST00000479161 PSEN2P49810 448 aa17.57■□□□□ 0.4
C9orf3-217ENST00000479161 PSMC6P62333 389 aa17.57■□□□□ 0.4
C9orf3-217ENST00000479161 MFSD10Q14728 455 aa17.57■□□□□ 0.4
C9orf3-217ENST00000479161 TNFRSF25Q93038 417 aa17.57■□□□□ 0.4
C9orf3-217ENST00000479161 TRIM43Q96BQ3 446 aaPredicted RBP17.57■□□□□ 0.4
C9orf3-217ENST00000479161 RIT2Q99578 217 aa17.57■□□□□ 0.4
C9orf3-217ENST00000479161 LBHD1Q9BQE6 289 aaPredicted RBP17.57■□□□□ 0.4
C9orf3-217ENST00000479161 GTF2IRD1Q9UHL9 959 aa17.57■□□□□ 0.4
C9orf3-217ENST00000479161 ZNF215Q9UL58 517 aaPredicted RBP17.57■□□□□ 0.4
C9orf3-217ENST00000479161 MYH9P35579 1960 aaKnown RBP17.57■□□□□ 0.4
C9orf3-217ENST00000479161 TRIOBPQ9H2D6 2365 aa17.56■□□□□ 0.4
C9orf3-217ENST00000479161 IGKV6D-21A0A0A0MT36 114 aa17.56■□□□□ 0.4
C9orf3-217ENST00000479161 GSTTP1A0A1W2PQM5 241 aa17.56■□□□□ 0.4
C9orf3-217ENST00000479161 B4GALT4O60513 344 aa17.56■□□□□ 0.4
C9orf3-217ENST00000479161 LGR5O75473 907 aa17.56■□□□□ 0.4
C9orf3-217ENST00000479161 SLC26A2P50443 739 aa17.56■□□□□ 0.4
C9orf3-217ENST00000479161 ITGB3BPQ13352 177 aaPredicted RBP17.56■□□□□ 0.4
C9orf3-217ENST00000479161 KIAA0753Q2KHM9 967 aa17.56■□□□□ 0.4
C9orf3-217ENST00000479161 KRT40Q6A162 431 aa17.56■□□□□ 0.4
C9orf3-217ENST00000479161 ZNF746Q6NUN9 644 aaPredicted RBP17.56■□□□□ 0.4
C9orf3-217ENST00000479161 FBXO18Q8NFZ0 1043 aa17.56■□□□□ 0.4
C9orf3-217ENST00000479161 TNPO1Q92973 898 aaKnown RBP17.56■□□□□ 0.4
C9orf3-217ENST00000479161 SMARCAD1Q9H4L7 1026 aa17.56■□□□□ 0.4
C9orf3-217ENST00000479161 ZMYND8Q9ULU4 1186 aaPredicted RBP17.56■□□□□ 0.4
C9orf3-217ENST00000479161 TRIP12Q14669 1992 aaPredicted RBP17.56■□□□□ 0.4
C9orf3-217ENST00000479161 WDR81Q562E7 1941 aa17.56■□□□□ 0.4
C9orf3-217ENST00000479161 RAG1P15918 1043 aa17.55■□□□□ 0.4
C9orf3-217ENST00000479161 TCF7P36402 384 aaPredicted RBP17.55■□□□□ 0.4
C9orf3-217ENST00000479161 MAGEA10P43363 369 aaPredicted RBP17.55■□□□□ 0.4
C9orf3-217ENST00000479161 RBL2Q08999 1139 aa17.55■□□□□ 0.4
C9orf3-217ENST00000479161 SAFBQ15424 915 aaKnown RBP eCLIP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms