RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 EFEMP2O95967 443 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 ARL4AP40617 200 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 GALK1P51570 392 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 RPL11P62913 178 aaKnown RBP7.27□□□□□ -1.25
CCDC171-207ENST00000478913 KIR3DS1Q14943 382 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 STYK1Q6J9G0 422 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 RSPO2Q6UXX9 243 aaPredicted RBP7.27□□□□□ -1.25
CCDC171-207ENST00000478913 SIRT2Q8IXJ6 389 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 RCBTB1Q8NDN9 531 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 ASIC4Q96FT7 647 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 PHF20Q9BVI0 1012 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 GPR27Q9NS67 375 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 FANCLQ9NW38 375 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 BTG4Q9NY30 223 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 GULP1Q9UBP9 304 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 ACSL6Q9UKU0 697 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 ABCA6Q8N139 1617 aa7.27□□□□□ -1.25
CCDC171-207ENST00000478913 ARNTLO00327 626 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 CDC45O75419 566 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 GLI1P08151 1106 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 C6orf222P0C671 652 aaPredicted RBP7.26□□□□□ -1.25
CCDC171-207ENST00000478913 LCP1P13796 627 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 JUNBP17275 347 aaPredicted RBP7.26□□□□□ -1.25
CCDC171-207ENST00000478913 ITGB5P18084 799 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 TACR1P25103 407 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 GTF2A2P52657 109 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 GABREP78334 506 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 CYP4F8P98187 520 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 MVKQ03426 396 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 MAMDC2Q7Z304 686 aaPredicted RBP7.26□□□□□ -1.25
CCDC171-207ENST00000478913 UNC5CLQ8IV45 518 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 NLGN2Q8NFZ4 835 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 FAM168AQ92567 244 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 PTPRN2Q92932 1015 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 KRTAP4-5Q9BYR2 181 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 CRTAC1Q9NQ79 661 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 PDLIM7Q9NR12 457 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 RWDD3Q9Y3V2 267 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 PCDHA2Q9Y5H9 948 aa7.26□□□□□ -1.25
CCDC171-207ENST00000478913 TIMM13Q9Y5L4 95 aaPredicted RBP7.26□□□□□ -1.25
CCDC171-207ENST00000478913 PRDM15P57071 1507 aaPredicted RBP7.26□□□□□ -1.25
CCDC171-207ENST00000478913 MYOM1P52179 1685 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 TIAM1Q13009 1591 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 BRWD3Q6RI45 1802 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 ASMTLO95671 621 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 MSL3P1P0C860 447 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 PNLIPP16233 465 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 SDE2Q6IQ49 451 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 KCNT2Q6UVM3 1135 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 NLGN1Q8N2Q7 840 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 LZTR1Q8N653 840 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 USP33Q8TEY7 942 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 SHISA4Q96DD7 197 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 CHAMP1Q96JM3 812 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 ZFYVE21Q9BQ24 234 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 MRPL4Q9BYD3 311 aaKnown RBP7.25□□□□□ -1.25
CCDC171-207ENST00000478913 SLC6A17Q9H1V8 727 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 NCOA5Q9HCD5 579 aaKnown RBP7.25□□□□□ -1.25
CCDC171-207ENST00000478913 MARCH2Q9P0N8 246 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 NDOR1Q9UHB4 597 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 SFMBT1Q9UHJ3 866 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 YBX2Q9Y2T7 364 aaKnown RBP7.25□□□□□ -1.25
CCDC171-207ENST00000478913 TRAF6Q9Y4K3 522 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 DISP2A7MBM2 1401 aa7.25□□□□□ -1.25
CCDC171-207ENST00000478913 AQP7O14520 342 aa7.24□□□□□ -1.25
CCDC171-207ENST00000478913 ENPP3O14638 875 aa7.24□□□□□ -1.25
CCDC171-207ENST00000478913 TCEA2Q15560 299 aa7.24□□□□□ -1.25
CCDC171-207ENST00000478913 IFNL3Q8IZI9 196 aa7.24□□□□□ -1.25
CCDC171-207ENST00000478913 SYNPOQ8N3V7 929 aa7.24□□□□□ -1.25
CCDC171-207ENST00000478913 INTS4Q96HW7 963 aaKnown RBP7.24□□□□□ -1.25
CCDC171-207ENST00000478913 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP7.24□□□□□ -1.25
CCDC171-207ENST00000478913 ZC3H13Q5T200 1668 aaKnown RBP7.24□□□□□ -1.25
CCDC171-207ENST00000478913 MIA2Q96PC5 1412 aa7.24□□□□□ -1.25
CCDC171-207ENST00000478913 WDR90Q96KV7 1748 aa7.24□□□□□ -1.25
CCDC171-207ENST00000478913 KIF14Q15058 1648 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 PLD2O14939 933 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 SMARCA5O60264 1052 aaPredicted RBP7.23□□□□□ -1.25
CCDC171-207ENST00000478913 MSCO60682 206 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 EFCAB14O75071 495 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 FUCA1P04066 466 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 BCL6P41182 706 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 GPR85P60893 370 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 LSAMPQ13449 338 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 ADGRF1Q5T601 910 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 BICRALQ6AI39 1079 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 MPZL3Q6UWV2 235 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 C16orf86Q6ZW13 317 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 MTDHQ86UE4 582 aaKnown RBP7.23□□□□□ -1.25
CCDC171-207ENST00000478913 CABP7Q86V35 215 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 TEX2Q8IWB9 1127 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 DPF3Q92784 378 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 SLC52A2Q9HAB3 445 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 EID1Q9Y6B2 187 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 GLI3P10071 1580 aa7.23□□□□□ -1.25
CCDC171-207ENST00000478913 ABCC3O15438 1527 aa7.22□□□□□ -1.25
CCDC171-207ENST00000478913 PTCH1Q13635 1447 aa7.22□□□□□ -1.25
CCDC171-207ENST00000478913 PPP1R12AO14974 1030 aaPredicted RBP7.22□□□□□ -1.25
CCDC171-207ENST00000478913 PPP1R11O60927 126 aaPredicted RBP7.22□□□□□ -1.25
CCDC171-207ENST00000478913 APPP05067 770 aa7.22□□□□□ -1.25
CCDC171-207ENST00000478913 FPR2P25090 351 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms