RNA–Protein interactions for RNA: ENST00000478603.5

C9orf3-216, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 802 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-216ENST00000478603 TUT1Q9H6E5 874 aaKnown RBP26.27■■□□□ 1.8
C9orf3-216ENST00000478603 PRDM6Q9NQX0 595 aa26.27■■□□□ 1.8
C9orf3-216ENST00000478603 ADCK5Q3MIX3 580 aa26.26■■□□□ 1.79
C9orf3-216ENST00000478603 ZNF618Q5T7W0 954 aa26.26■■□□□ 1.79
C9orf3-216ENST00000478603 TRAF7Q6Q0C0 670 aa26.26■■□□□ 1.79
C9orf3-216ENST00000478603 HERC6Q8IVU3 1022 aa26.26■■□□□ 1.79
C9orf3-216ENST00000478603 PHOSPHO2Q8TCD6 241 aa26.26■■□□□ 1.79
C9orf3-216ENST00000478603 CDC45O75419 566 aa26.25■■□□□ 1.79
C9orf3-216ENST00000478603 BAIAP3O94812 1187 aa26.25■■□□□ 1.79
C9orf3-216ENST00000478603 EXOSC10Q01780 885 aaKnown RBP26.25■■□□□ 1.79
C9orf3-216ENST00000478603 SP4Q02446 784 aa26.25■■□□□ 1.79
C9orf3-216ENST00000478603 CCDC85BQ15834 202 aaPredicted RBP26.25■■□□□ 1.79
C9orf3-216ENST00000478603 APOA5Q6Q788 366 aa26.25■■□□□ 1.79
C9orf3-216ENST00000478603 SYNE3Q6ZMZ3 975 aa26.25■■□□□ 1.79
C9orf3-216ENST00000478603 HEATR3Q7Z4Q2 680 aa26.25■■□□□ 1.79
C9orf3-216ENST00000478603 TRIM50Q86XT4 487 aa26.25■■□□□ 1.79
C9orf3-216ENST00000478603 GPR20Q99678 358 aa26.25■■□□□ 1.79
C9orf3-216ENST00000478603 CERS4Q9HA82 394 aa26.25■■□□□ 1.79
C9orf3-216ENST00000478603 C17orf102A2RUQ5 167 aa26.24■■□□□ 1.79
C9orf3-216ENST00000478603 ARHGEF15O94989 841 aa26.24■■□□□ 1.79
C9orf3-216ENST00000478603 CXCL10P02778 98 aa26.24■■□□□ 1.79
C9orf3-216ENST00000478603 SMIM10L2AP0DMW4 78 aa26.24■■□□□ 1.79
C9orf3-216ENST00000478603 SMIM10L2BP0DMW5 78 aa26.24■■□□□ 1.79
C9orf3-216ENST00000478603 KCNJ6P48051 423 aa26.24■■□□□ 1.79
C9orf3-216ENST00000478603 WDR5P61964 334 aaKnown RBP26.24■■□□□ 1.79
C9orf3-216ENST00000478603 MBTPS1Q14703 1052 aa26.24■■□□□ 1.79
C9orf3-216ENST00000478603 XRRA1Q6P2D8 792 aa26.24■■□□□ 1.79
C9orf3-216ENST00000478603 CNKSR3Q6P9H4 555 aa26.24■■□□□ 1.79
C9orf3-216ENST00000478603 TMCO2Q7Z6W1 182 aaPredicted RBP26.24■■□□□ 1.79
C9orf3-216ENST00000478603 BRPF3Q9ULD4 1205 aa26.24■■□□□ 1.79
C9orf3-216ENST00000478603 CNTNAP5Q8WYK1 1306 aa26.23■■□□□ 1.79
C9orf3-216ENST00000478603 KAT6AQ92794 2004 aa26.23■■□□□ 1.79
C9orf3-216ENST00000478603 PARNO95453 639 aaKnown RBP26.23■■□□□ 1.79
C9orf3-216ENST00000478603 UTP14CQ5TAP6 766 aaKnown RBP26.23■■□□□ 1.79
C9orf3-216ENST00000478603 DHX32Q7L7V1 743 aaKnown RBP26.23■■□□□ 1.79
C9orf3-216ENST00000478603 NLRX1Q86UT6 975 aa26.23■■□□□ 1.79
C9orf3-216ENST00000478603 SERINC5Q86VE9 423 aa26.23■■□□□ 1.79
C9orf3-216ENST00000478603 ATP6V0A1Q93050 837 aa26.23■■□□□ 1.79
C9orf3-216ENST00000478603 USP26Q9BXU7 913 aa26.23■■□□□ 1.79
C9orf3-216ENST00000478603 RNPEPQ9H4A4 650 aa26.23■■□□□ 1.79
C9orf3-216ENST00000478603 VCANP13611 3396 aa26.23■■□□□ 1.79
C9orf3-216ENST00000478603 RFXAPO00287 272 aa26.22■■□□□ 1.79
C9orf3-216ENST00000478603 THPOP40225 353 aa26.22■■□□□ 1.79
C9orf3-216ENST00000478603 DEFB103AP81534 67 aa26.22■■□□□ 1.79
C9orf3-216ENST00000478603 SENP7Q9BQF6 1050 aa26.22■■□□□ 1.79
C9orf3-216ENST00000478603 KIF28PB7ZC32 967 aa26.21■■□□□ 1.79
C9orf3-216ENST00000478603 TREHO43280 583 aa26.21■■□□□ 1.79
C9orf3-216ENST00000478603 ATP9AO75110 1047 aa26.21■■□□□ 1.79
C9orf3-216ENST00000478603 ITGB5P18084 799 aa26.21■■□□□ 1.79
C9orf3-216ENST00000478603 HOXC8P31273 242 aa26.21■■□□□ 1.79
C9orf3-216ENST00000478603 TSGA10IPQ3SY00 556 aa26.21■■□□□ 1.79
C9orf3-216ENST00000478603 WWC2Q6AWC2 1192 aa26.21■■□□□ 1.79
C9orf3-216ENST00000478603 PCDHA6Q9UN73 950 aa26.21■■□□□ 1.79
C9orf3-216ENST00000478603 PCDHA8Q9Y5H6 950 aa26.21■■□□□ 1.79
C9orf3-216ENST00000478603 EPOPA6NHQ4 379 aa26.2■■□□□ 1.78
C9orf3-216ENST00000478603 SPDYE3A6NKU9 549 aa26.2■■□□□ 1.78
C9orf3-216ENST00000478603 ZBTB43O43298 467 aa26.2■■□□□ 1.78
C9orf3-216ENST00000478603 TLL1O43897 1013 aa26.2■■□□□ 1.78
C9orf3-216ENST00000478603 TAP1Q03518 808 aa26.2■■□□□ 1.78
C9orf3-216ENST00000478603 RTN1Q16799 776 aa26.2■■□□□ 1.78
C9orf3-216ENST00000478603 GPRASP2Q96D09 838 aa26.2■■□□□ 1.78
C9orf3-216ENST00000478603 SETD4Q9NVD3 440 aa26.2■■□□□ 1.78
C9orf3-216ENST00000478603 RBM28Q9NW13 759 aaKnown RBP26.2■■□□□ 1.78
C9orf3-216ENST00000478603 PKD2L1Q9P0L9 805 aa26.2■■□□□ 1.78
C9orf3-216ENST00000478603 KCNA2P16389 499 aa26.19■■□□□ 1.78
C9orf3-216ENST00000478603 TYW1BQ6NUM6 668 aa26.19■■□□□ 1.78
C9orf3-216ENST00000478603 SPRED2Q7Z698 418 aa26.19■■□□□ 1.78
C9orf3-216ENST00000478603 MICALL1Q8N3F8 863 aa26.19■■□□□ 1.78
C9orf3-216ENST00000478603 UBIAD1Q9Y5Z9 338 aa26.19■■□□□ 1.78
C9orf3-216ENST00000478603 PRRC2BQ5JSZ5 2229 aaKnown RBP26.19■■□□□ 1.78
C9orf3-216ENST00000478603 MICAL3Q7RTP6 2002 aa26.19■■□□□ 1.78
C9orf3-216ENST00000478603 KLF18A0A0U1RQI7 1052 aa26.18■■□□□ 1.78
C9orf3-216ENST00000478603 ABHD14A-ACY1A0A1B0GW23 586 aa26.18■■□□□ 1.78
C9orf3-216ENST00000478603 LCHNA4D1U4 455 aa26.18■■□□□ 1.78
C9orf3-216ENST00000478603 RSPH10B2B2RC85 870 aa26.18■■□□□ 1.78
C9orf3-216ENST00000478603 RSPH10BP0C881 870 aa26.18■■□□□ 1.78
C9orf3-216ENST00000478603 CPA1P15085 419 aa26.18■■□□□ 1.78
C9orf3-216ENST00000478603 FUT2Q10981 343 aa26.18■■□□□ 1.78
C9orf3-216ENST00000478603 KRT32Q14532 448 aa26.18■■□□□ 1.78
C9orf3-216ENST00000478603 ARNTL2Q8WYA1 636 aa26.18■■□□□ 1.78
C9orf3-216ENST00000478603 ZNF215Q9UL58 517 aaPredicted RBP26.18■■□□□ 1.78
C9orf3-216ENST00000478603 GOLGA8AA7E2F4 631 aa26.17■■□□□ 1.78
C9orf3-216ENST00000478603 GOLGA8BA8MQT2 603 aa26.17■■□□□ 1.78
C9orf3-216ENST00000478603 LGR5O75473 907 aa26.17■■□□□ 1.78
C9orf3-216ENST00000478603 NAPAP54920 295 aa26.17■■□□□ 1.78
C9orf3-216ENST00000478603 MTMR1Q13613 665 aa26.17■■□□□ 1.78
C9orf3-216ENST00000478603 IKBKEQ14164 716 aa26.17■■□□□ 1.78
C9orf3-216ENST00000478603 GIMAP8Q8ND71 665 aaPredicted RBP26.17■■□□□ 1.78
C9orf3-216ENST00000478603 CDHR1Q96JP9 859 aa26.17■■□□□ 1.78
C9orf3-216ENST00000478603 PGBD1Q96JS3 809 aa26.17■■□□□ 1.78
C9orf3-216ENST00000478603 ZBED2Q9BTP6 218 aa26.17■■□□□ 1.78
C9orf3-216ENST00000478603 NAP1L2Q9ULW6 460 aaPredicted RBP26.17■■□□□ 1.78
C9orf3-216ENST00000478603 V9GY48 417 aaPredicted RBP26.17■■□□□ 1.78
C9orf3-216ENST00000478603 CTSHP09668 335 aa26.16■■□□□ 1.78
C9orf3-216ENST00000478603 CDC27P30260 824 aa26.16■■□□□ 1.78
C9orf3-216ENST00000478603 TCF7P36402 384 aaPredicted RBP26.16■■□□□ 1.78
C9orf3-216ENST00000478603 FAM117BQ6P1L5 589 aa26.16■■□□□ 1.78
C9orf3-216ENST00000478603 DBF4BQ8NFT6 615 aa26.16■■□□□ 1.78
C9orf3-216ENST00000478603 CCDC136Q96JN2 1154 aa26.16■■□□□ 1.78
C9orf3-216ENST00000478603 OSBPL7Q9BZF2 842 aa26.16■■□□□ 1.78
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms