RNA–Protein interactions for RNA: ENST00000478541.1

CYTH3-206, Transcript of cytohesin 3, humanhuman

TSL 2

Gene CYTH3, Length 505 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYTH3-206ENST00000478541 TRIP12Q14669 1992 aaPredicted RBP18.32■□□□□ 0.52
CYTH3-206ENST00000478541 ACRP10323 421 aa18.32■□□□□ 0.52
CYTH3-206ENST00000478541 KCNA2P16389 499 aa18.32■□□□□ 0.52
CYTH3-206ENST00000478541 CHMP4BP1P59074 171 aa18.32■□□□□ 0.52
CYTH3-206ENST00000478541 BFSP2Q13515 415 aa18.32■□□□□ 0.52
CYTH3-206ENST00000478541 MTMR1Q13613 665 aa18.32■□□□□ 0.52
CYTH3-206ENST00000478541 CCDC155Q8N6L0 562 aa18.32■□□□□ 0.52
CYTH3-206ENST00000478541 CAGE1Q8TC20 777 aa18.32■□□□□ 0.52
CYTH3-206ENST00000478541 PHKBQ93100 1093 aa18.32■□□□□ 0.52
CYTH3-206ENST00000478541 GPR20Q99678 358 aa18.32■□□□□ 0.52
CYTH3-206ENST00000478541 ALG1Q9BT22 464 aa18.32■□□□□ 0.52
CYTH3-206ENST00000478541 ANO3Q9BYT9 981 aa18.32■□□□□ 0.52
CYTH3-206ENST00000478541 UPF3BQ9BZI7 483 aaKnown RBP18.32■□□□□ 0.52
CYTH3-206ENST00000478541 ZMYND12Q9H0C1 365 aa18.32■□□□□ 0.52
CYTH3-206ENST00000478541 JADE2Q9NQC1 790 aa18.32■□□□□ 0.52
CYTH3-206ENST00000478541 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.31■□□□□ 0.52
CYTH3-206ENST00000478541 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.31■□□□□ 0.52
CYTH3-206ENST00000478541 H3BRB1 525 aa18.31■□□□□ 0.52
CYTH3-206ENST00000478541 ATP9AO75110 1047 aa18.31■□□□□ 0.52
CYTH3-206ENST00000478541 FGBP02675 491 aa18.31■□□□□ 0.52
CYTH3-206ENST00000478541 LGALS2P05162 132 aa18.31■□□□□ 0.52
CYTH3-206ENST00000478541 PFKMP08237 780 aa18.31■□□□□ 0.52
CYTH3-206ENST00000478541 RFC2P35250 354 aa18.31■□□□□ 0.52
CYTH3-206ENST00000478541 AKAP17AQ02040 695 aaKnown RBP18.31■□□□□ 0.52
CYTH3-206ENST00000478541 RBL2Q08999 1139 aa18.31■□□□□ 0.52
CYTH3-206ENST00000478541 MCTP2Q6DN12 878 aa18.31■□□□□ 0.52
CYTH3-206ENST00000478541 HERVK_113Q902F9 699 aa18.31■□□□□ 0.52
CYTH3-206ENST00000478541 VWCEQ96DN2 955 aa18.31■□□□□ 0.52
CYTH3-206ENST00000478541 IL17RAQ96F46 866 aa18.31■□□□□ 0.52
CYTH3-206ENST00000478541 SCLYQ96I15 445 aa18.31■□□□□ 0.52
CYTH3-206ENST00000478541 MXRA8Q9BRK3 442 aa18.31■□□□□ 0.52
CYTH3-206ENST00000478541 TUT1Q9H6E5 874 aaKnown RBP18.31■□□□□ 0.52
CYTH3-206ENST00000478541 IQCF3P0C7M6 154 aa18.3■□□□□ 0.52
CYTH3-206ENST00000478541 HOXC8P31273 242 aa18.3■□□□□ 0.52
CYTH3-206ENST00000478541 SREBF1P36956 1147 aa18.3■□□□□ 0.52
CYTH3-206ENST00000478541 CCT2P78371 535 aaKnown RBP18.3■□□□□ 0.52
CYTH3-206ENST00000478541 Q7L0L9 218 aa18.3■□□□□ 0.52
CYTH3-206ENST00000478541 RETREG2Q8NC44 543 aa18.3■□□□□ 0.52
CYTH3-206ENST00000478541 AFAP1L1Q8TED9 768 aa18.3■□□□□ 0.52
CYTH3-206ENST00000478541 MTIF3Q9H2K0 278 aaKnown RBP18.3■□□□□ 0.52
CYTH3-206ENST00000478541 NCOA5Q9HCD5 579 aaKnown RBP18.3■□□□□ 0.52
CYTH3-206ENST00000478541 C6orf50Q9HD87 102 aa18.3■□□□□ 0.52
CYTH3-206ENST00000478541 PDRG1Q9NUG6 133 aa18.3■□□□□ 0.52
CYTH3-206ENST00000478541 MTMR10Q9NXD2 777 aa18.3■□□□□ 0.52
CYTH3-206ENST00000478541 GNA11P29992 359 aa18.29■□□□□ 0.52
CYTH3-206ENST00000478541 PTK7Q13308 1070 aa18.29■□□□□ 0.52
CYTH3-206ENST00000478541 CEP55Q53EZ4 464 aa18.29■□□□□ 0.52
CYTH3-206ENST00000478541 CRYGNQ8WXF5 182 aa18.29■□□□□ 0.52
CYTH3-206ENST00000478541 PGBD1Q96JS3 809 aa18.29■□□□□ 0.52
CYTH3-206ENST00000478541 SLC26A6Q9BXS9 759 aa18.29■□□□□ 0.52
CYTH3-206ENST00000478541 KCNH7Q9NS40 1196 aa18.29■□□□□ 0.52
CYTH3-206ENST00000478541 TMEM260Q9NX78 707 aa18.29■□□□□ 0.52
CYTH3-206ENST00000478541 TMEM265A0A087WTH1 108 aa18.28■□□□□ 0.52
CYTH3-206ENST00000478541 ZNF697Q5TEC3 545 aa18.28■□□□□ 0.52
CYTH3-206ENST00000478541 REXO1Q8N1G1 1221 aaKnown RBP18.28■□□□□ 0.52
CYTH3-206ENST00000478541 CCDC148Q8NFR7 591 aa18.28■□□□□ 0.52
CYTH3-206ENST00000478541 DHX38Q92620 1227 aaKnown RBP18.28■□□□□ 0.52
CYTH3-206ENST00000478541 SH3GLB2Q9NR46 395 aa18.28■□□□□ 0.52
CYTH3-206ENST00000478541 ZNF215Q9UL58 517 aaPredicted RBP18.28■□□□□ 0.52
CYTH3-206ENST00000478541 TELO2Q9Y4R8 837 aa18.28■□□□□ 0.52
CYTH3-206ENST00000478541 GBF1Q92538 1859 aa18.27■□□□□ 0.52
CYTH3-206ENST00000478541 MEIS1O00470 390 aa18.27■□□□□ 0.52
CYTH3-206ENST00000478541 PARNO95453 639 aaKnown RBP18.27■□□□□ 0.52
CYTH3-206ENST00000478541 CYP3A4P08684 503 aa18.27■□□□□ 0.52
CYTH3-206ENST00000478541 TCF7P36402 384 aaPredicted RBP18.27■□□□□ 0.52
CYTH3-206ENST00000478541 ARHGAP4P98171 946 aa18.27■□□□□ 0.52
CYTH3-206ENST00000478541 HIC1Q14526 733 aa18.27■□□□□ 0.52
CYTH3-206ENST00000478541 JAKMIP3Q5VZ66 844 aa18.27■□□□□ 0.52
CYTH3-206ENST00000478541 NIPA1Q7RTP0 329 aa18.27■□□□□ 0.52
CYTH3-206ENST00000478541 TRIM22Q8IYM9 498 aa18.27■□□□□ 0.52
CYTH3-206ENST00000478541 CYP2W1Q8TAV3 490 aa18.27■□□□□ 0.52
CYTH3-206ENST00000478541 BICD2Q8TD16 824 aa18.27■□□□□ 0.52
CYTH3-206ENST00000478541 SEPT1Q8WYJ6 367 aa18.27■□□□□ 0.52
CYTH3-206ENST00000478541 CXXC1Q9P0U4 656 aaPredicted RBP18.27■□□□□ 0.52
CYTH3-206ENST00000478541 NFASCO94856 1347 aa18.26■□□□□ 0.51
CYTH3-206ENST00000478541 GSTTP1A0A1W2PQM5 241 aa18.26■□□□□ 0.51
CYTH3-206ENST00000478541 C17orf102A2RUQ5 167 aa18.26■□□□□ 0.51
CYTH3-206ENST00000478541 CPLX1O14810 134 aa18.26■□□□□ 0.51
CYTH3-206ENST00000478541 DEXIO95424 95 aa18.26■□□□□ 0.51
CYTH3-206ENST00000478541 SMIM10L2AP0DMW4 78 aa18.26■□□□□ 0.51
CYTH3-206ENST00000478541 SMIM10L2BP0DMW5 78 aa18.26■□□□□ 0.51
CYTH3-206ENST00000478541 CKBP12277 381 aa18.26■□□□□ 0.51
CYTH3-206ENST00000478541 SELPP16109 830 aa18.26■□□□□ 0.51
CYTH3-206ENST00000478541 SP4Q02446 784 aa18.26■□□□□ 0.51
CYTH3-206ENST00000478541 SSRP1Q08945 709 aaKnown RBP18.26■□□□□ 0.51
CYTH3-206ENST00000478541 TRIM71Q2Q1W2 868 aaKnown RBP18.26■□□□□ 0.51
CYTH3-206ENST00000478541 CPLX2Q6PUV4 134 aaKnown RBP18.26■□□□□ 0.51
CYTH3-206ENST00000478541 OTOP2Q7RTS6 562 aa18.26■□□□□ 0.51
CYTH3-206ENST00000478541 SERINC5Q86VE9 423 aa18.26■□□□□ 0.51
CYTH3-206ENST00000478541 FAM177A1Q8N128 213 aaPredicted RBP18.26■□□□□ 0.51
CYTH3-206ENST00000478541 RNPEPQ9H4A4 650 aa18.26■□□□□ 0.51
CYTH3-206ENST00000478541 KAT6AQ92794 2004 aa18.26■□□□□ 0.51
CYTH3-206ENST00000478541 TET1Q8NFU7 2136 aa18.25■□□□□ 0.51
CYTH3-206ENST00000478541 ADAMTS3O15072 1205 aa18.25■□□□□ 0.51
CYTH3-206ENST00000478541 PPFIA3O75145 1194 aa18.25■□□□□ 0.51
CYTH3-206ENST00000478541 ARP10275 920 aa18.25■□□□□ 0.51
CYTH3-206ENST00000478541 ACTN1P12814 892 aa18.25■□□□□ 0.51
CYTH3-206ENST00000478541 ZNF200P98182 395 aaPredicted RBP18.25■□□□□ 0.51
CYTH3-206ENST00000478541 ANKRD1Q15327 319 aa18.25■□□□□ 0.51
CYTH3-206ENST00000478541 UTP14CQ5TAP6 766 aaKnown RBP18.25■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms