RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 PIK3AP1Q6ZUJ8 805 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 FAM177A1Q8N128 213 aaPredicted RBP7.85□□□□□ -1.15
BRCA1-215ENST00000478531 PPTC7Q8NI37 304 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 TBCKQ8TEA7 893 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 PPP1R13LQ8WUF5 828 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 CDHR1Q96JP9 859 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 C8orf76Q96K31 380 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 MXRA8Q9BRK3 442 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 JADE2Q9NQC1 790 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 KCNH7Q9NS40 1196 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 POLR3EQ9NVU0 708 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 TRIOBPQ9H2D6 2365 aa7.85□□□□□ -1.15
BRCA1-215ENST00000478531 A0A0U1RQG5 324 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-215ENST00000478531 A6NJR5 290 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 M0R2N6 131 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 DDX39AO00148 427 aaKnown RBP7.84□□□□□ -1.15
BRCA1-215ENST00000478531 ATP9AO75110 1047 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 MMP1P03956 469 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 KCNA2P16389 499 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 PURAQ00577 322 aaKnown RBP7.84□□□□□ -1.15
BRCA1-215ENST00000478531 NR5A1Q13285 461 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 NONOQ15233 471 aaKnown RBP eCLIP7.84□□□□□ -1.15
BRCA1-215ENST00000478531 DGKDQ16760 1214 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 PRR16Q569H4 304 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 KRT25Q7Z3Z0 450 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 PLA2G4DQ86XP0 818 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 IL27Q8NEV9 243 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 EMID1Q96A84 441 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-215ENST00000478531 PRDM5Q9NQX1 630 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-215ENST00000478531 LTBP2Q14767 1821 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 FAM205CA6NFA0 338 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 CYP3A4P08684 503 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 ARP10275 920 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 SYN1P17600 705 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 GJB2P29033 226 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 NKX3-2P78367 333 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 SETQ01105 290 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-215ENST00000478531 GNL2Q13823 731 aaKnown RBP7.84□□□□□ -1.15
BRCA1-215ENST00000478531 SAFBQ15424 915 aaKnown RBP eCLIP7.84□□□□□ -1.15
BRCA1-215ENST00000478531 LETM2Q2VYF4 491 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 FAM47CQ5HY64 1035 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 METTL7BQ6UX53 244 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 DIS3L2Q8IYB7 885 aaKnown RBP7.84□□□□□ -1.15
BRCA1-215ENST00000478531 CRYGNQ8WXF5 182 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 SDF4Q9BRK5 362 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 MTG1Q9BT17 334 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-215ENST00000478531 JPH1Q9HDC5 661 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-215ENST00000478531 ZMYND8Q9ULU4 1186 aaPredicted RBP7.84□□□□□ -1.15
BRCA1-215ENST00000478531 TELO2Q9Y4R8 837 aa7.84□□□□□ -1.15
BRCA1-215ENST00000478531 ELP1O95163 1332 aa7.83□□□□□ -1.16
BRCA1-215ENST00000478531 SZT2Q5T011 3432 aa7.83□□□□□ -1.16
BRCA1-215ENST00000478531 IGLV3-22A0A075B6J6 115 aa7.83□□□□□ -1.16
BRCA1-215ENST00000478531 BTBD18B2RXH4 712 aa7.83□□□□□ -1.16
BRCA1-215ENST00000478531 MEIS1O00470 390 aa7.83□□□□□ -1.16
BRCA1-215ENST00000478531 CABYRO75952 493 aa7.83□□□□□ -1.16
BRCA1-215ENST00000478531 TDP2O95551 362 aa7.83□□□□□ -1.16
BRCA1-215ENST00000478531 ITGB3BPQ13352 177 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-215ENST00000478531 ITGA7Q13683 1181 aa7.83□□□□□ -1.16
BRCA1-215ENST00000478531 SNX17Q15036 470 aa7.83□□□□□ -1.16
BRCA1-215ENST00000478531 EARS2Q5JPH6 523 aaKnown RBP7.83□□□□□ -1.16
BRCA1-215ENST00000478531 UTP14CQ5TAP6 766 aaKnown RBP7.83□□□□□ -1.16
BRCA1-215ENST00000478531 TRIM50Q86XT4 487 aa7.83□□□□□ -1.16
BRCA1-215ENST00000478531 GIMAP8Q8ND71 665 aaPredicted RBP7.83□□□□□ -1.16
BRCA1-215ENST00000478531 SENP7Q9BQF6 1050 aa7.83□□□□□ -1.16
BRCA1-215ENST00000478531 ZNF577Q9BSK1 485 aa7.83□□□□□ -1.16
BRCA1-215ENST00000478531 AGO4Q9HCK5 861 aaKnown RBP7.83□□□□□ -1.16
BRCA1-215ENST00000478531 TCEAL9Q9UHQ7 104 aa7.83□□□□□ -1.16
BRCA1-215ENST00000478531 SMC3Q9UQE7 1217 aa7.83□□□□□ -1.16
BRCA1-215ENST00000478531 KIF3AQ9Y496 699 aa7.83□□□□□ -1.16
BRCA1-215ENST00000478531 NR2E3Q9Y5X4 410 aa7.83□□□□□ -1.16
BRCA1-215ENST00000478531 H0YGN5 161 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 ARVCFO00192 962 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 IPO5O00410 1097 aaKnown RBP7.82□□□□□ -1.16
BRCA1-215ENST00000478531 MAFGO15525 162 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 KPNA6O60684 536 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 LGALS2P05162 132 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 TLE2Q04725 743 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 NBPF20Q3BBV1 942 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 NIPA1Q7RTP0 329 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 NEK8Q86SG6 692 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 HSCBQ8IWL3 235 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 GJA10Q969M2 543 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 GPR20Q99678 358 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 SLC9A2Q9UBY0 812 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-215ENST00000478531 GRIN2DO15399 1336 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 MROH7Q68CQ1 1323 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 DCDC2CA8MYV0 355 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 K7ELQ4 463 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-215ENST00000478531 MSH4O15457 936 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 SLC37A4O43826 429 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 EDIL3O43854 480 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 CCNT1O60563 726 aaKnown RBP7.82□□□□□ -1.16
BRCA1-215ENST00000478531 ATP2B1P20020 1258 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 CIITAP33076 1130 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 TCF7P36402 384 aaPredicted RBP7.82□□□□□ -1.16
BRCA1-215ENST00000478531 USP11P51784 963 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 MFSD10Q14728 455 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 KIAA0753Q2KHM9 967 aa7.82□□□□□ -1.16
BRCA1-215ENST00000478531 C1orf53Q5VUE5 145 aa7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms