RNA–Protein interactions for RNA: ENST00000478525.1

HPS3-205, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 3

Gene HPS3, Length 601 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-205ENST00000478525 CLDND1Q9NY35 253 aa5.65□□□□□ -1.5
HPS3-205ENST00000478525 MYOTQ9UBF9 498 aa5.65□□□□□ -1.5
HPS3-205ENST00000478525 STRIP2Q9ULQ0 834 aa5.65□□□□□ -1.5
HPS3-205ENST00000478525 TCAF1Q9Y4C2 921 aa5.65□□□□□ -1.5
HPS3-205ENST00000478525 B4GALT4O60513 344 aa5.64□□□□□ -1.51
HPS3-205ENST00000478525 TMCO4Q5TGY1 634 aa5.64□□□□□ -1.51
HPS3-205ENST00000478525 NUDT10Q8NFP7 164 aa5.64□□□□□ -1.51
HPS3-205ENST00000478525 PPIL4Q8WUA2 492 aaKnown RBP eCLIP5.64□□□□□ -1.51
HPS3-205ENST00000478525 NUDT11Q96G61 164 aa5.64□□□□□ -1.51
HPS3-205ENST00000478525 EPB41L1Q9H4G0 881 aa5.64□□□□□ -1.51
HPS3-205ENST00000478525 CPP00450 1065 aa5.63□□□□□ -1.51
HPS3-205ENST00000478525 KCNJ6P48051 423 aa5.63□□□□□ -1.51
HPS3-205ENST00000478525 GFRA1P56159 465 aa5.63□□□□□ -1.51
HPS3-205ENST00000478525 KLF10Q13118 480 aa5.63□□□□□ -1.51
HPS3-205ENST00000478525 SV2CQ496J9 727 aa5.63□□□□□ -1.51
HPS3-205ENST00000478525 CRB2Q5IJ48 1285 aa5.63□□□□□ -1.51
HPS3-205ENST00000478525 PHF19Q5T6S3 580 aa5.63□□□□□ -1.51
HPS3-205ENST00000478525 USP51Q70EK9 711 aa5.63□□□□□ -1.51
HPS3-205ENST00000478525 PROSER1Q86XN7 944 aa5.63□□□□□ -1.51
HPS3-205ENST00000478525 TMEM145Q8NBT3 493 aa5.63□□□□□ -1.51
HPS3-205ENST00000478525 C1orf159Q96HA4 380 aa5.63□□□□□ -1.51
HPS3-205ENST00000478525 SLITRK6Q9H5Y7 841 aa5.63□□□□□ -1.51
HPS3-205ENST00000478525 BARX1Q9HBU1 254 aaPredicted RBP5.63□□□□□ -1.51
HPS3-205ENST00000478525 LRP2BPQ9P2M1 347 aa5.63□□□□□ -1.51
HPS3-205ENST00000478525 ADAM29Q9UKF5 820 aa5.63□□□□□ -1.51
HPS3-205ENST00000478525 ZDHHC9Q9Y397 364 aa5.63□□□□□ -1.51
HPS3-205ENST00000478525 SUSD5O60279 629 aa5.62□□□□□ -1.51
HPS3-205ENST00000478525 ZNF623O75123 536 aa5.62□□□□□ -1.51
HPS3-205ENST00000478525 DGKIO75912 1065 aa5.62□□□□□ -1.51
HPS3-205ENST00000478525 CNOT4O95628 575 aaKnown RBP5.62□□□□□ -1.51
HPS3-205ENST00000478525 Q8TCH9 128 aa5.62□□□□□ -1.51
HPS3-205ENST00000478525 PHOSPHO1Q8TCT1 267 aa5.62□□□□□ -1.51
HPS3-205ENST00000478525 HSPBP1Q9NZL4 362 aa5.62□□□□□ -1.51
HPS3-205ENST00000478525 ASH2LQ9UBL3 628 aa5.62□□□□□ -1.51
HPS3-205ENST00000478525 ING1Q9UK53 422 aaPredicted RBP5.62□□□□□ -1.51
HPS3-205ENST00000478525 HS3ST3A1Q9Y663 406 aa5.62□□□□□ -1.51
HPS3-205ENST00000478525 SMAD7O15105 426 aaKnown RBP5.61□□□□□ -1.51
HPS3-205ENST00000478525 KLHL18O94889 574 aa5.61□□□□□ -1.51
HPS3-205ENST00000478525 LARP1BQ659C4 914 aaKnown RBP5.61□□□□□ -1.51
HPS3-205ENST00000478525 RALYLQ86SE5 291 aaKnown RBP5.61□□□□□ -1.51
HPS3-205ENST00000478525 FAM178BQ8IXR5 827 aa5.61□□□□□ -1.51
HPS3-205ENST00000478525 DTX3Q8N9I9 347 aa5.61□□□□□ -1.51
HPS3-205ENST00000478525 CDIP1Q9H305 208 aa5.61□□□□□ -1.51
HPS3-205ENST00000478525 ACBD3Q9H3P7 528 aa5.61□□□□□ -1.51
HPS3-205ENST00000478525 SMOC1Q9H4F8 434 aa5.61□□□□□ -1.51
HPS3-205ENST00000478525 SLC35F1Q5T1Q4 408 aa5.6□□□□□ -1.51
HPS3-205ENST00000478525 MRM1Q6IN84 353 aaKnown RBP5.6□□□□□ -1.51
HPS3-205ENST00000478525 TTLL11Q8NHH1 800 aa5.6□□□□□ -1.51
HPS3-205ENST00000478525 CCDC140Q96MF4 163 aa5.6□□□□□ -1.51
HPS3-205ENST00000478525 GNRHR2Q96P88 292 aa5.6□□□□□ -1.51
HPS3-205ENST00000478525 SEMA4AQ9H3S1 761 aa5.6□□□□□ -1.51
HPS3-205ENST00000478525 DLL4Q9NR61 685 aa5.6□□□□□ -1.51
HPS3-205ENST00000478525 ACTR10Q9NZ32 417 aa5.6□□□□□ -1.51
HPS3-205ENST00000478525 PPARGC1AQ9UBK2 798 aaKnown RBP5.6□□□□□ -1.51
HPS3-205ENST00000478525 TESMINQ9Y4I5 508 aa5.6□□□□□ -1.51
HPS3-205ENST00000478525 NPFFR2Q9Y5X5 522 aa5.6□□□□□ -1.51
HPS3-205ENST00000478525 GRIN1Q05586 938 aa5.59□□□□□ -1.51
HPS3-205ENST00000478525 VASNQ6EMK4 673 aa5.59□□□□□ -1.51
HPS3-205ENST00000478525 CYP4F22Q6NT55 531 aa5.59□□□□□ -1.51
HPS3-205ENST00000478525 GPR155Q7Z3F1 870 aa5.59□□□□□ -1.51
HPS3-205ENST00000478525 PIP4K2CQ8TBX8 421 aa5.59□□□□□ -1.51
HPS3-205ENST00000478525 INPP5FQ9Y2H2 1132 aa5.59□□□□□ -1.51
HPS3-205ENST00000478525 MRVI1Q9Y6F6 885 aa5.59□□□□□ -1.51
HPS3-205ENST00000478525 KRIT1O00522 736 aa5.58□□□□□ -1.52
HPS3-205ENST00000478525 SLC27A2O14975 620 aa5.58□□□□□ -1.52
HPS3-205ENST00000478525 FOXS1O43638 330 aa5.58□□□□□ -1.52
HPS3-205ENST00000478525 MAFKO60675 156 aa5.58□□□□□ -1.52
HPS3-205ENST00000478525 KNG1P01042 644 aa5.58□□□□□ -1.52
HPS3-205ENST00000478525 CAPNS1P04632 268 aa5.58□□□□□ -1.52
HPS3-205ENST00000478525 CSF2RBP32927 897 aa5.58□□□□□ -1.52
HPS3-205ENST00000478525 MFAP1P55081 439 aaKnown RBP5.58□□□□□ -1.52
HPS3-205ENST00000478525 SMAD2Q15796 467 aaKnown RBP5.58□□□□□ -1.52
HPS3-205ENST00000478525 TCTN3Q6NUS6 607 aa5.58□□□□□ -1.52
HPS3-205ENST00000478525 Q6ZUG5 572 aa5.58□□□□□ -1.52
HPS3-205ENST00000478525 JAM3Q9BX67 310 aa5.58□□□□□ -1.52
HPS3-205ENST00000478525 TGIF2Q9GZN2 237 aa5.58□□□□□ -1.52
HPS3-205ENST00000478525 SEC61A2Q9H9S3 476 aa5.58□□□□□ -1.52
HPS3-205ENST00000478525 SLC6A20Q9NP91 592 aa5.58□□□□□ -1.52
HPS3-205ENST00000478525 SLC4A7Q9Y6M7 1214 aa5.58□□□□□ -1.52
HPS3-205ENST00000478525 MSCO60682 206 aa5.57□□□□□ -1.52
HPS3-205ENST00000478525 ATF4P18848 351 aaPredicted RBP5.57□□□□□ -1.52
HPS3-205ENST00000478525 GRIA2P42262 883 aa5.57□□□□□ -1.52
HPS3-205ENST00000478525 RBM12BQ8IXT5 1001 aaKnown RBP5.57□□□□□ -1.52
HPS3-205ENST00000478525 MICAL1Q8TDZ2 1067 aa5.57□□□□□ -1.52
HPS3-205ENST00000478525 CLEC4DQ8WXI8 215 aa5.57□□□□□ -1.52
HPS3-205ENST00000478525 LRRC37BQ96QE4 947 aa5.57□□□□□ -1.52
HPS3-205ENST00000478525 ZNF341Q9BYN7 854 aa5.57□□□□□ -1.52
HPS3-205ENST00000478525 ZFP69BQ9UJL9 534 aa5.57□□□□□ -1.52
HPS3-205ENST00000478525 DDAH1O94760 285 aa5.56□□□□□ -1.52
HPS3-205ENST00000478525 GLRBP48167 497 aa5.56□□□□□ -1.52
HPS3-205ENST00000478525 MAP4K2Q12851 820 aa5.56□□□□□ -1.52
HPS3-205ENST00000478525 SKIDA1Q1XH10 827 aa5.56□□□□□ -1.52
HPS3-205ENST00000478525 TRIM48Q8IWZ4 208 aa5.56□□□□□ -1.52
HPS3-205ENST00000478525 AJUBAQ96IF1 538 aa5.56□□□□□ -1.52
HPS3-205ENST00000478525 LMF1Q96S06 567 aa5.56□□□□□ -1.52
HPS3-205ENST00000478525 KCND1Q9NSA2 647 aa5.56□□□□□ -1.52
HPS3-205ENST00000478525 NPIPB8E9PQR5 432 aa5.55□□□□□ -1.52
HPS3-205ENST00000478525 FBXO21O94952 628 aa5.55□□□□□ -1.52
HPS3-205ENST00000478525 LTFP02788 710 aa5.55□□□□□ -1.52
HPS3-205ENST00000478525 CHGBP05060 677 aa5.55□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms