RNA–Protein interactions for RNA: ENST00000478223.2

SKI-202, Transcript of SKI proto-oncogene, humanhuman

TSL 3

Gene SKI, Length 294 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKI-202ENST00000478223 TMEM240Q5SV17 173 aa13.4□□□□□ -0.26
SKI-202ENST00000478223 JAKMIP3Q5VZ66 844 aa13.4□□□□□ -0.26
SKI-202ENST00000478223 TRIM50Q86XT4 487 aa13.4□□□□□ -0.26
SKI-202ENST00000478223 ZNF713Q8N859 430 aaPredicted RBP13.4□□□□□ -0.26
SKI-202ENST00000478223 RASGRP4Q8TDF6 673 aa13.4□□□□□ -0.26
SKI-202ENST00000478223 DHX38Q92620 1227 aaKnown RBP13.4□□□□□ -0.26
SKI-202ENST00000478223 WNT8BQ93098 351 aa13.4□□□□□ -0.26
SKI-202ENST00000478223 GPR20Q99678 358 aa13.4□□□□□ -0.26
SKI-202ENST00000478223 RNF26Q9BY78 433 aaPredicted RBP13.4□□□□□ -0.26
SKI-202ENST00000478223 SEZ6LQ9BYH1 1024 aa13.4□□□□□ -0.26
SKI-202ENST00000478223 VPS54Q9P1Q0 977 aa13.4□□□□□ -0.26
SKI-202ENST00000478223 TPCN1Q9ULQ1 816 aa13.4□□□□□ -0.26
SKI-202ENST00000478223 ARID2Q68CP9 1835 aa13.4□□□□□ -0.26
SKI-202ENST00000478223 LARGE1O95461 756 aa13.39□□□□□ -0.27
SKI-202ENST00000478223 ZNF200P98182 395 aaPredicted RBP13.39□□□□□ -0.27
SKI-202ENST00000478223 PTPN11Q06124 597 aaPredicted RBP13.39□□□□□ -0.27
SKI-202ENST00000478223 SCRN1Q12765 414 aa13.39□□□□□ -0.27
SKI-202ENST00000478223 PTGISQ16647 500 aa13.39□□□□□ -0.27
SKI-202ENST00000478223 C8orf34Q49A92 452 aa13.39□□□□□ -0.27
SKI-202ENST00000478223 FAM109BQ6ICB4 259 aaPredicted RBP13.39□□□□□ -0.27
SKI-202ENST00000478223 XRRA1Q6P2D8 792 aa13.39□□□□□ -0.27
SKI-202ENST00000478223 METTL7BQ6UX53 244 aa13.39□□□□□ -0.27
SKI-202ENST00000478223 NLRX1Q86UT6 975 aa13.39□□□□□ -0.27
SKI-202ENST00000478223 SESTD1Q86VW0 696 aa13.39□□□□□ -0.27
SKI-202ENST00000478223 GPRASP2Q96D09 838 aa13.39□□□□□ -0.27
SKI-202ENST00000478223 IL17RAQ96F46 866 aa13.39□□□□□ -0.27
SKI-202ENST00000478223 ZNF274Q96GC6 653 aaPredicted RBP13.39□□□□□ -0.27
SKI-202ENST00000478223 RNPC3Q96LT9 517 aaKnown RBP13.39□□□□□ -0.27
SKI-202ENST00000478223 AIFM3Q96NN9 605 aa13.39□□□□□ -0.27
SKI-202ENST00000478223 ZMYND12Q9H0C1 365 aa13.39□□□□□ -0.27
SKI-202ENST00000478223 JADE2Q9NQC1 790 aa13.39□□□□□ -0.27
SKI-202ENST00000478223 GTF2IRD1Q9UHL9 959 aa13.39□□□□□ -0.27
SKI-202ENST00000478223 CHD9Q3L8U1 2897 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 COL4A4P53420 1690 aaPredicted RBP13.38□□□□□ -0.27
SKI-202ENST00000478223 ESYT2A0FGR8 921 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 EDIL3O43854 480 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 PPFIA4O75335 1185 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 ARP10275 920 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 SREBF1P36956 1147 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 AK2P54819 239 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 ANAPC15P60006 121 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 PPIGQ13427 754 aaKnown RBP eCLIP13.38□□□□□ -0.272e-6■■□□□ 14.2
SKI-202ENST00000478223 MTMR1Q13613 665 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 NEDD9Q14511 834 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 ZNF365Q70YC5 407 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 TMEM199Q8N511 208 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 CRYGNQ8WXF5 182 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 UIMC1Q96RL1 719 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 SENP7Q9BQF6 1050 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 MXRA8Q9BRK3 442 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 IL23AQ9NPF7 189 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 REV3LO60673 3130 aa13.38□□□□□ -0.27
SKI-202ENST00000478223 ATG2AQ2TAZ0 1938 aa13.37□□□□□ -0.27
SKI-202ENST00000478223 KIAA1671Q9BY89 1806 aa13.37□□□□□ -0.27
SKI-202ENST00000478223 GSTTP1A0A1W2PQM5 241 aa13.37□□□□□ -0.27
SKI-202ENST00000478223 NOP56O00567 594 aaKnown RBP13.37□□□□□ -0.27
SKI-202ENST00000478223 AP3B2Q13367 1082 aa13.37□□□□□ -0.27
SKI-202ENST00000478223 UTP14CQ5TAP6 766 aaKnown RBP13.37□□□□□ -0.27
SKI-202ENST00000478223 RASIP1Q5U651 963 aa13.37□□□□□ -0.27
SKI-202ENST00000478223 C7orf31Q8N865 590 aa13.37□□□□□ -0.27
SKI-202ENST00000478223 KATNAL1Q9BW62 490 aa13.37□□□□□ -0.27
SKI-202ENST00000478223 KCNH7Q9NS40 1196 aa13.37□□□□□ -0.27
SKI-202ENST00000478223 CXXC1Q9P0U4 656 aaPredicted RBP13.37□□□□□ -0.27
SKI-202ENST00000478223 CHD7Q9P2D1 2997 aa13.37□□□□□ -0.27
SKI-202ENST00000478223 IGLV3-22A0A075B6J6 115 aa13.36□□□□□ -0.27
SKI-202ENST00000478223 GRXCR1A8MXD5 290 aa13.36□□□□□ -0.27
SKI-202ENST00000478223 FAM86B1E9PN63 330 aa13.36□□□□□ -0.27
SKI-202ENST00000478223 H3BRB1 525 aa13.36□□□□□ -0.27
SKI-202ENST00000478223 CTDNEP1O95476 244 aa13.36□□□□□ -0.27
SKI-202ENST00000478223 FOSP01100 380 aaPredicted RBP13.36□□□□□ -0.27
SKI-202ENST00000478223 FAM86B2P0C5J1 330 aa13.36□□□□□ -0.27
SKI-202ENST00000478223 SUPT20HL2P0C7V6 817 aa13.36□□□□□ -0.27
SKI-202ENST00000478223 HOXC8P31273 242 aa13.36□□□□□ -0.27
SKI-202ENST00000478223 TCF7P36402 384 aaPredicted RBP13.36□□□□□ -0.27
SKI-202ENST00000478223 ARHGAP4P98171 946 aa13.36□□□□□ -0.27
SKI-202ENST00000478223 AKAP17AQ02040 695 aaKnown RBP13.36□□□□□ -0.27
SKI-202ENST00000478223 SSRP1Q08945 709 aaKnown RBP13.36□□□□□ -0.27
SKI-202ENST00000478223 ITGB3BPQ13352 177 aaPredicted RBP13.36□□□□□ -0.27
SKI-202ENST00000478223 GPNMBQ14956 572 aa13.36□□□□□ -0.27
SKI-202ENST00000478223 NPY5RQ15761 445 aa13.36□□□□□ -0.27
SKI-202ENST00000478223 TRIM71Q2Q1W2 868 aaKnown RBP13.36□□□□□ -0.27
SKI-202ENST00000478223 DEFB128Q7Z7B8 93 aa13.36□□□□□ -0.27
SKI-202ENST00000478223 REXO1Q8N1G1 1221 aaKnown RBP13.36□□□□□ -0.27
SKI-202ENST00000478223 TUT1Q9H6E5 874 aaKnown RBP13.36□□□□□ -0.27
SKI-202ENST00000478223 EHMT1Q9H9B1 1298 aa13.36□□□□□ -0.27
SKI-202ENST00000478223 AGO4Q9HCK5 861 aaKnown RBP13.36□□□□□ -0.27
SKI-202ENST00000478223 C6orf50Q9HD87 102 aa13.36□□□□□ -0.27
SKI-202ENST00000478223 PITPNM1O00562 1244 aa13.35□□□□□ -0.27
SKI-202ENST00000478223 PFKFB2O60825 505 aa13.35□□□□□ -0.27
SKI-202ENST00000478223 IQCF3P0C7M6 154 aa13.35□□□□□ -0.27
SKI-202ENST00000478223 SMIM10L2AP0DMW4 78 aa13.35□□□□□ -0.27
SKI-202ENST00000478223 SMIM10L2BP0DMW5 78 aa13.35□□□□□ -0.27
SKI-202ENST00000478223 ST3GAL1Q11201 340 aa13.35□□□□□ -0.27
SKI-202ENST00000478223 ME3Q16798 604 aa13.35□□□□□ -0.27
SKI-202ENST00000478223 TCTN1Q2MV58 587 aa13.35□□□□□ -0.27
SKI-202ENST00000478223 CEP55Q53EZ4 464 aa13.35□□□□□ -0.27
SKI-202ENST00000478223 PSRC1Q6PGN9 363 aaPredicted RBP13.35□□□□□ -0.27
SKI-202ENST00000478223 TRAF7Q6Q0C0 670 aa13.35□□□□□ -0.27
SKI-202ENST00000478223 OTOP2Q7RTS6 562 aa13.35□□□□□ -0.27
SKI-202ENST00000478223 NECAB1Q8N987 351 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms