RNA–Protein interactions for RNA: ENST00000477983.1

LMBR1-216, Transcript of limb development membrane protein 1, humanhuman

TSL 2

Gene LMBR1, Length 605 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMBR1-216ENST00000477983 YTHDC1Q96MU7 727 aaKnown RBP6.83□□□□□ -1.32
LMBR1-216ENST00000477983 GMLQ99445 158 aa6.83□□□□□ -1.32
LMBR1-216ENST00000477983 PDGFDQ9GZP0 370 aaPredicted RBP6.83□□□□□ -1.32
LMBR1-216ENST00000477983 WASF3Q9UPY6 502 aa6.83□□□□□ -1.32
LMBR1-216ENST00000477983 CCDC88BA6NC98 1476 aa6.83□□□□□ -1.32
LMBR1-216ENST00000477983 BAZ1BQ9UIG0 1483 aaKnown RBP6.83□□□□□ -1.32
LMBR1-216ENST00000477983 DLX3O60479 287 aa6.82□□□□□ -1.32
LMBR1-216ENST00000477983 B4GALT3O60512 393 aa6.82□□□□□ -1.32
LMBR1-216ENST00000477983 MAFKO60675 156 aa6.82□□□□□ -1.32
LMBR1-216ENST00000477983 MLLT6P55198 1093 aaPredicted RBP6.82□□□□□ -1.32
LMBR1-216ENST00000477983 SLC43A3Q8NBI5 491 aa6.82□□□□□ -1.32
LMBR1-216ENST00000477983 SGSM3Q96HU1 749 aa6.82□□□□□ -1.32
LMBR1-216ENST00000477983 CLIC6Q96NY7 704 aa6.82□□□□□ -1.32
LMBR1-216ENST00000477983 TMEM209Q96SK2 561 aa6.82□□□□□ -1.32
LMBR1-216ENST00000477983 SLC6A20Q9NP91 592 aa6.82□□□□□ -1.32
LMBR1-216ENST00000477983 MYOTQ9UBF9 498 aa6.82□□□□□ -1.32
LMBR1-216ENST00000477983 ASH2LQ9UBL3 628 aa6.82□□□□□ -1.32
LMBR1-216ENST00000477983 DNAJA1P31689 397 aaKnown RBP6.81□□□□□ -1.32
LMBR1-216ENST00000477983 PUM1Q14671 1186 aaKnown RBP eCLIP6.81□□□□□ -1.32
LMBR1-216ENST00000477983 PRAMEF18Q5VWM3 479 aa6.81□□□□□ -1.32
LMBR1-216ENST00000477983 PKN3Q6P5Z2 889 aa6.81□□□□□ -1.32
LMBR1-216ENST00000477983 CELF2-AS1Q8N7Q2 184 aa6.81□□□□□ -1.32
LMBR1-216ENST00000477983 TTLL11Q8NHH1 800 aa6.81□□□□□ -1.32
LMBR1-216ENST00000477983 WRNIP1Q96S55 665 aa6.81□□□□□ -1.32
LMBR1-216ENST00000477983 IER2Q9BTL4 223 aa6.81□□□□□ -1.32
LMBR1-216ENST00000477983 KRIT1O00522 736 aa6.8□□□□□ -1.32
LMBR1-216ENST00000477983 MSCO60682 206 aa6.8□□□□□ -1.32
LMBR1-216ENST00000477983 RBM25P49756 843 aaKnown RBP6.8□□□□□ -1.32
LMBR1-216ENST00000477983 PLEKHH3Q7Z736 793 aa6.8□□□□□ -1.32
LMBR1-216ENST00000477983 PROSER1Q86XN7 944 aa6.8□□□□□ -1.32
LMBR1-216ENST00000477983 TRIM48Q8IWZ4 208 aa6.8□□□□□ -1.32
LMBR1-216ENST00000477983 LOXL4Q96JB6 756 aa6.8□□□□□ -1.32
LMBR1-216ENST00000477983 TMEM168Q9H0V1 697 aa6.8□□□□□ -1.32
LMBR1-216ENST00000477983 TMPRSS5Q9H3S3 457 aa6.8□□□□□ -1.32
LMBR1-216ENST00000477983 L2HGDHQ9H9P8 463 aa6.8□□□□□ -1.32
LMBR1-216ENST00000477983 KLF4O43474 513 aa6.79□□□□□ -1.32
LMBR1-216ENST00000477983 LAMTOR5O43504 91 aa6.79□□□□□ -1.32
LMBR1-216ENST00000477983 CYP1A1P04798 512 aaPredicted RBP6.79□□□□□ -1.32
LMBR1-216ENST00000477983 ZNF20P17024 532 aa6.79□□□□□ -1.32
LMBR1-216ENST00000477983 HSP90AA2PQ14568 343 aaPredicted RBP6.79□□□□□ -1.32
LMBR1-216ENST00000477983 DDR2Q16832 855 aa6.79□□□□□ -1.32
LMBR1-216ENST00000477983 GLB1LQ6UWU2 654 aa6.79□□□□□ -1.32
LMBR1-216ENST00000477983 HNRNPLLQ8WVV9 542 aaKnown RBP6.79□□□□□ -1.32
LMBR1-216ENST00000477983 CLEC4DQ8WXI8 215 aa6.79□□□□□ -1.32
LMBR1-216ENST00000477983 ZCCHC14Q8WYQ9 949 aaKnown RBP6.79□□□□□ -1.32
LMBR1-216ENST00000477983 ZSWIM3Q96MP5 696 aa6.79□□□□□ -1.32
LMBR1-216ENST00000477983 C8orf49Q96NF6 230 aa6.79□□□□□ -1.32
LMBR1-216ENST00000477983 JAM3Q9BX67 310 aa6.79□□□□□ -1.32
LMBR1-216ENST00000477983 PPP4R1LQ9P1A2 415 aa6.79□□□□□ -1.32
LMBR1-216ENST00000477983 R3HCC1Q9Y3T6 440 aaKnown RBP6.79□□□□□ -1.32
LMBR1-216ENST00000477983 ZNF536O15090 1300 aa6.78□□□□□ -1.32
LMBR1-216ENST00000477983 TNFRSF1AP19438 455 aa6.78□□□□□ -1.32
LMBR1-216ENST00000477983 ANKS3Q6ZW76 656 aa6.78□□□□□ -1.32
LMBR1-216ENST00000477983 OTOP3Q7RTS5 596 aa6.78□□□□□ -1.32
LMBR1-216ENST00000477983 LIMS2Q7Z4I7 341 aa6.78□□□□□ -1.32
LMBR1-216ENST00000477983 KLHL36Q8N4N3 616 aa6.78□□□□□ -1.32
LMBR1-216ENST00000477983 DCAF4Q8WV16 495 aa6.78□□□□□ -1.32
LMBR1-216ENST00000477983 PHF20Q9BVI0 1012 aa6.78□□□□□ -1.32
LMBR1-216ENST00000477983 ST7Q9NRC1 585 aa6.78□□□□□ -1.32
LMBR1-216ENST00000477983 IGSF5Q9NSI5 407 aa6.78□□□□□ -1.32
LMBR1-216ENST00000477983 CROTQ9UKG9 612 aa6.78□□□□□ -1.32
LMBR1-216ENST00000477983 IQCA1LA6NCM1 817 aa6.77□□□□□ -1.33
LMBR1-216ENST00000477983 FGFR1P11362 822 aa6.77□□□□□ -1.33
LMBR1-216ENST00000477983 COL6A1P12109 1028 aa6.77□□□□□ -1.33
LMBR1-216ENST00000477983 EPHB4P54760 987 aa6.77□□□□□ -1.33
LMBR1-216ENST00000477983 PPP2CBP62714 309 aa6.77□□□□□ -1.33
LMBR1-216ENST00000477983 PPP2CAP67775 309 aa6.77□□□□□ -1.33
LMBR1-216ENST00000477983 HABP4Q5JVS0 413 aaKnown RBP6.77□□□□□ -1.33
LMBR1-216ENST00000477983 LBX2Q6XYB7 198 aa6.77□□□□□ -1.33
LMBR1-216ENST00000477983 USP53Q70EK8 1073 aa6.77□□□□□ -1.33
LMBR1-216ENST00000477983 PIP4K2CQ8TBX8 421 aa6.77□□□□□ -1.33
LMBR1-216ENST00000477983 ZFYVE21Q9BQ24 234 aa6.77□□□□□ -1.33
LMBR1-216ENST00000477983 AARSD1Q9BTE6 412 aaKnown RBP6.77□□□□□ -1.33
LMBR1-216ENST00000477983 PPARGC1AQ9UBK2 798 aaKnown RBP6.77□□□□□ -1.33
LMBR1-216ENST00000477983 NCAPD3P42695 1498 aa6.77□□□□□ -1.33
LMBR1-216ENST00000477983 SLC27A2O14975 620 aa6.76□□□□□ -1.33
LMBR1-216ENST00000477983 MATN3O15232 486 aa6.76□□□□□ -1.33
LMBR1-216ENST00000477983 NFATC3Q12968 1075 aa6.76□□□□□ -1.33
LMBR1-216ENST00000477983 NTRK3Q16288 839 aa6.76□□□□□ -1.33
LMBR1-216ENST00000477983 DTX3Q8N9I9 347 aa6.76□□□□□ -1.33
LMBR1-216ENST00000477983 CHST13Q8NET6 341 aa6.76□□□□□ -1.33
LMBR1-216ENST00000477983 ST13P5Q8NFI4 369 aaPredicted RBP6.76□□□□□ -1.33
LMBR1-216ENST00000477983 DVL3Q92997 716 aaPredicted RBP6.76□□□□□ -1.33
LMBR1-216ENST00000477983 DLL4Q9NR61 685 aa6.76□□□□□ -1.33
LMBR1-216ENST00000477983 FTSJ1Q9UET6 329 aa6.76□□□□□ -1.33
LMBR1-216ENST00000477983 CHGBP05060 677 aa6.75□□□□□ -1.33
LMBR1-216ENST00000477983 TMC5Q6UXY8 1006 aa6.75□□□□□ -1.33
LMBR1-216ENST00000477983 DNERQ8NFT8 737 aa6.75□□□□□ -1.33
LMBR1-216ENST00000477983 UHMK1Q8TAS1 419 aaKnown RBP6.75□□□□□ -1.33
LMBR1-216ENST00000477983 IGDCC4Q8TDY8 1250 aa6.75□□□□□ -1.33
LMBR1-216ENST00000477983 OSBP2Q969R2 916 aa6.75□□□□□ -1.33
LMBR1-216ENST00000477983 ARHGEF4Q9NR80 690 aa6.75□□□□□ -1.33
LMBR1-216ENST00000477983 RBPJLQ9UBG7 517 aa6.75□□□□□ -1.33
LMBR1-216ENST00000477983 ADAM29Q9UKF5 820 aa6.75□□□□□ -1.33
LMBR1-216ENST00000477983 CC2D2AQ9P2K1 1620 aa6.75□□□□□ -1.33
LMBR1-216ENST00000477983 HMGXB3Q12766 1538 aa6.75□□□□□ -1.33
LMBR1-216ENST00000477983 GPR42O15529 346 aa6.74□□□□□ -1.33
LMBR1-216ENST00000477983 PABPC1P11940 636 aaKnown RBP6.74□□□□□ -1.33
LMBR1-216ENST00000477983 FAHP16930 419 aa6.74□□□□□ -1.33
LMBR1-216ENST00000477983 GRK2P25098 689 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms