RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 PZPP20742 1482 aa6.91□□□□□ -1.3
VPS50-214ENST00000477935 KIF14Q15058 1648 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 ADAMTS20P59510 1910 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 C22orf46C9J442 243 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 N4BP3O15049 544 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 MYO1BO43795 1136 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 ADCY3O60266 1144 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 DIAPH1O60610 1272 aaKnown RBP6.9□□□□□ -1.3
VPS50-214ENST00000477935 FPR2P25090 351 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 BCL6P41182 706 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 CDR1P51861 262 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 HNRNPMP52272 730 aaKnown RBP eCLIP6.9□□□□□ -1.3
VPS50-214ENST00000477935 GTF2A2P52657 109 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 PRR5P85299 388 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 IFRD2Q12894 506 aaPredicted RBP6.9□□□□□ -1.3
VPS50-214ENST00000477935 KCNA10Q16322 511 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 NSMFQ6X4W1 530 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 USP53Q70EK8 1073 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 NLRP10Q86W26 655 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 CILP2Q8IUL8 1156 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 Q8N1Y9 231 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 OSBP2Q969R2 916 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 MKL1Q969V6 931 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 DRC1Q96MC2 740 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 NUDT5Q9UKK9 219 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 PCDHA2Q9Y5H9 948 aa6.9□□□□□ -1.3
VPS50-214ENST00000477935 FMN1Q68DA7 1419 aa6.9□□□□□ -1.31
VPS50-214ENST00000477935 KIAA1107Q9UPP5 1409 aa6.9□□□□□ -1.31
VPS50-214ENST00000477935 IQGAP1P46940 1657 aa6.9□□□□□ -1.31
VPS50-214ENST00000477935 NPIPB6E9PJ23 425 aa6.89□□□□□ -1.31
VPS50-214ENST00000477935 LDHDQ86WU2 507 aa6.89□□□□□ -1.31
VPS50-214ENST00000477935 MZB1Q8WU39 189 aa6.89□□□□□ -1.31
VPS50-214ENST00000477935 PEX11GQ96HA9 241 aa6.89□□□□□ -1.31
VPS50-214ENST00000477935 PLA2G2DQ9UNK4 145 aa6.89□□□□□ -1.31
VPS50-214ENST00000477935 PCDHA5Q9Y5H7 936 aa6.89□□□□□ -1.31
VPS50-214ENST00000477935 PLXNC1O60486 1568 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 SAMD9LQ8IVG5 1584 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 ATP7AQ04656 1500 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 MSH6P52701 1360 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 DHX29Q7Z478 1369 aaKnown RBP6.88□□□□□ -1.31
VPS50-214ENST00000477935 KDM2BQ8NHM5 1336 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 IRS2Q9Y4H2 1338 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 KIF3BO15066 747 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 LINC00310P59036 64 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 LSAMPQ13449 338 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 NTRK3Q16288 839 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 CEP68Q76N32 757 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 IGDCC3Q8IVU1 814 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 ZBTB38Q8NAP3 1195 aaPredicted RBP6.88□□□□□ -1.31
VPS50-214ENST00000477935 UBXN4Q92575 508 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 TRMT2BQ96GJ1 504 aaKnown RBP6.88□□□□□ -1.31
VPS50-214ENST00000477935 TMEM169Q96HH4 297 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 CHAMP1Q96JM3 812 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 OSBPL2Q9H1P3 480 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 GPR27Q9NS67 375 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 SIT1Q9Y3P8 196 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 X6R8D5 127 aa6.88□□□□□ -1.31
VPS50-214ENST00000477935 PLEKHH2Q8IVE3 1493 aa6.87□□□□□ -1.31
VPS50-214ENST00000477935 AFF2P51816 1311 aa6.87□□□□□ -1.31
VPS50-214ENST00000477935 FBLN1P23142 703 aa6.87□□□□□ -1.31
VPS50-214ENST00000477935 NCKAP1LP55160 1127 aa6.87□□□□□ -1.31
VPS50-214ENST00000477935 JAG1P78504 1218 aa6.87□□□□□ -1.31
VPS50-214ENST00000477935 MROH9Q5TGP6 573 aa6.87□□□□□ -1.31
VPS50-214ENST00000477935 RSPO2Q6UXX9 243 aaPredicted RBP6.87□□□□□ -1.31
VPS50-214ENST00000477935 DCP2Q8IU60 420 aaKnown RBP6.87□□□□□ -1.31
VPS50-214ENST00000477935 RIOX2Q8IUF8 465 aa6.87□□□□□ -1.31
VPS50-214ENST00000477935 TSPAN17Q96FV3 270 aa6.87□□□□□ -1.31
VPS50-214ENST00000477935 SIGLEC10Q96LC7 697 aa6.87□□□□□ -1.31
VPS50-214ENST00000477935 TOX2Q96NM4 488 aa6.87□□□□□ -1.31
VPS50-214ENST00000477935 DNAJC7Q99615 494 aa6.87□□□□□ -1.31
VPS50-214ENST00000477935 PHF20Q9BVI0 1012 aa6.87□□□□□ -1.31
VPS50-214ENST00000477935 CNOT6Q9ULM6 557 aaKnown RBP6.87□□□□□ -1.31
VPS50-214ENST00000477935 IRAK3Q9Y616 596 aa6.87□□□□□ -1.31
VPS50-214ENST00000477935 STRCP1A6NGW2 1772 aa6.87□□□□□ -1.31
VPS50-214ENST00000477935 ROBO1Q9Y6N7 1651 aa6.87□□□□□ -1.31
VPS50-214ENST00000477935 SCAF11Q99590 1463 aaKnown RBP6.86□□□□□ -1.31
VPS50-214ENST00000477935 BLACEA4D250 179 aa6.86□□□□□ -1.31
VPS50-214ENST00000477935 H7BY64 318 aa6.86□□□□□ -1.31
VPS50-214ENST00000477935 IRS4O14654 1257 aaPredicted RBP6.86□□□□□ -1.31
VPS50-214ENST00000477935 MSCO60682 206 aa6.86□□□□□ -1.31
VPS50-214ENST00000477935 FAM153BP0C7A2 387 aa6.86□□□□□ -1.31
VPS50-214ENST00000477935 SSPNQ14714 243 aa6.86□□□□□ -1.31
VPS50-214ENST00000477935 SLC9A5Q14940 896 aa6.86□□□□□ -1.31
VPS50-214ENST00000477935 FOXB2Q5VYV0 432 aa6.86□□□□□ -1.31
VPS50-214ENST00000477935 KCNT2Q6UVM3 1135 aa6.86□□□□□ -1.31
VPS50-214ENST00000477935 SCUBE1Q8IWY4 988 aa6.86□□□□□ -1.31
VPS50-214ENST00000477935 DCAF4Q8WV16 495 aa6.86□□□□□ -1.31
VPS50-214ENST00000477935 ALG3Q92685 438 aa6.86□□□□□ -1.31
VPS50-214ENST00000477935 CDC6Q99741 560 aa6.86□□□□□ -1.31
VPS50-214ENST00000477935 BCAS3Q9H6U6 928 aa6.86□□□□□ -1.31
VPS50-214ENST00000477935 CFDP1Q9UEE9 299 aaPredicted RBP6.86□□□□□ -1.31
VPS50-214ENST00000477935 SETBP1Q9Y6X0 1596 aa6.86□□□□□ -1.31
VPS50-214ENST00000477935 RTEL1-TNFRSF6BF6WH68 1400 aa6.85□□□□□ -1.31
VPS50-214ENST00000477935 BUB1BO60566 1050 aaPredicted RBP6.85□□□□□ -1.31
VPS50-214ENST00000477935 ZBTB7AO95365 584 aa6.85□□□□□ -1.31
VPS50-214ENST00000477935 PFKLP17858 780 aa6.85□□□□□ -1.31
VPS50-214ENST00000477935 CFPP27918 469 aa6.85□□□□□ -1.31
VPS50-214ENST00000477935 SLC6A11P48066 632 aa6.85□□□□□ -1.31
VPS50-214ENST00000477935 LONRF2Q1L5Z9 754 aa6.85□□□□□ -1.31
VPS50-214ENST00000477935 FAM209AQ5JX71 171 aa6.85□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms