RNA–Protein interactions for RNA: ENST00000477739.1

CMC1-209, Transcript of C-X9-C motif containing 1, humanhuman

TSL 1 (best)

Gene CMC1, Length 3,749 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMC1-209ENST00000477739 ZC3H12CQ9C0D7 883 aaKnown RBP10.75□□□□□ -0.69
CMC1-209ENST00000477739 PANK4Q9NVE7 773 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 SALL4Q9UJQ4 1053 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 PCDHA12Q9UN75 941 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 PTPN22Q9Y2R2 807 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 JRKLQ9Y4A0 524 aa10.75□□□□□ -0.69
CMC1-209ENST00000477739 GCNT3O95395 438 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 ADAM9Q13443 819 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 SLC9C1Q4G0N8 1177 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 DUSP9Q99956 384 aaKnown RBP10.74□□□□□ -0.69
CMC1-209ENST00000477739 SEMA6BQ9H3T3 888 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 MYO1AQ9UBC5 1043 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 MYH10P35580 1976 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 SSTR3P32745 418 aaPredicted RBP10.74□□□□□ -0.69
CMC1-209ENST00000477739 MTM1Q13496 603 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 TRIM14Q14142 442 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 NPY5RQ15761 445 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 ARL6IP4Q66PJ3 421 aaKnown RBP10.74□□□□□ -0.69
CMC1-209ENST00000477739 PRR5LQ6MZQ0 368 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 ZNF746Q6NUN9 644 aaPredicted RBP10.74□□□□□ -0.69
CMC1-209ENST00000477739 TBC1D31Q96DN5 1066 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 JPH2Q9BR39 696 aaPredicted RBP10.74□□□□□ -0.69
CMC1-209ENST00000477739 MAD2L2Q9UI95 211 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 GFPT2O94808 682 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 GLI1P08151 1106 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 RASA1P20936 1047 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 ATP2B4P23634 1241 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 KLRC1P26715 233 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 RDXP35241 583 aaKnown RBP10.74□□□□□ -0.69
CMC1-209ENST00000477739 KRT71Q3SY84 523 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 VWA3BQ502W6 1294 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 FAM26FQ5R3K3 315 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 MSL1Q68DK7 614 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 OTUD6AQ7L8S5 288 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 KRT25Q7Z3Z0 450 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 KIAA0895Q8NCT3 520 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 TRIM58Q8NG06 486 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 CEP89Q96ST8 783 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.74□□□□□ -0.69
CMC1-209ENST00000477739 ATP8A1Q9Y2Q0 1164 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 NID2Q14112 1375 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 DOT1LQ8TEK3 1739 aa10.74□□□□□ -0.69
CMC1-209ENST00000477739 SYF2O95926 243 aaKnown RBP10.73□□□□□ -0.69
CMC1-209ENST00000477739 RPSAP08865 295 aaKnown RBP10.73□□□□□ -0.69
CMC1-209ENST00000477739 FGRP09769 529 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 NR2F2P24468 414 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 CTNNA1P35221 906 aaKnown RBP10.73□□□□□ -0.69
CMC1-209ENST00000477739 ADCY7P51828 1080 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 CCDC38Q502W7 563 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 TTI2Q6NXR4 508 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 TRAPPC11Q7Z392 1133 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 DYDC1Q8WWB3 177 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 CCDC114Q96M63 670 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 BARHL2Q9NY43 387 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 DDX25Q9UHL0 483 aaKnown RBP10.73□□□□□ -0.69
CMC1-209ENST00000477739 CAPN11Q9UMQ6 739 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 MYH8P13535 1937 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 STRCQ7RTU9 1775 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 USP17L10C9JJH3 530 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 SLC9A1P19634 815 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 EEF1GP26641 437 aaKnown RBP10.73□□□□□ -0.69
CMC1-209ENST00000477739 CDR1P51861 262 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 CCNI2Q6ZMN8 369 aaPredicted RBP10.73□□□□□ -0.69
CMC1-209ENST00000477739 MYOCDQ8IZQ8 938 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 RETREG2Q8NC44 543 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 TNFRSF25Q93038 417 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 CD2APQ9Y5K6 639 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 MYH2Q9UKX2 1941 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 TM4SF1P30408 202 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 IRAK1P51617 712 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 ASIC2Q16515 512 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 CFAP221Q4G0U5 840 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 CPLX4Q7Z7G2 160 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 TPH2Q8IWU9 490 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 SYCP3Q8IZU3 236 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 SPIRE2Q8WWL2 714 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 ZIM3Q96PE6 472 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 LZTS2Q9BRK4 669 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 RAB34Q9BZG1 259 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 PCIF1Q9H4Z3 704 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 HOMER2Q9NSB8 354 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 AMACRQ9UHK6 382 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 ROBO1Q9Y6N7 1651 aa10.73□□□□□ -0.69
CMC1-209ENST00000477739 MAP2K7O14733 419 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 CFBP00751 764 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 SH3RF1Q7Z6J0 888 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 SH3GLB2Q9NR46 395 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 A0A087X0T9 212 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 LOC102724159A0A0B4J2E5 919 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 KRIT1O00522 736 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 FAM228BP0C875 321 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 AKR1B1P15121 316 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 PWP2Q15269 919 aaKnown RBP10.72□□□□□ -0.69
CMC1-209ENST00000477739 RPS6KA1Q15418 735 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 TRIP13Q15645 432 aaPredicted RBP10.72□□□□□ -0.69
CMC1-209ENST00000477739 FAM182AQ5T1J6 154 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 PNMA8AQ86V59 439 aaPredicted RBP10.72□□□□□ -0.69
CMC1-209ENST00000477739 SPATA20Q8TB22 786 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 MDM1Q8TC05 714 aa10.72□□□□□ -0.69
CMC1-209ENST00000477739 FAM84AQ96KN4 292 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms