RNA–Protein interactions for RNA: ENST00000477612.5

COL9A3-211, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 3

Gene COL9A3, Length 635 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-211ENST00000477612 CAGE1Q8TC20 777 aa24.93■■□□□ 1.58
COL9A3-211ENST00000477612 SCLYQ96I15 445 aa24.93■■□□□ 1.58
COL9A3-211ENST00000477612 GPR20Q99678 358 aa24.93■■□□□ 1.58
COL9A3-211ENST00000477612 CYP46A1Q9Y6A2 500 aa24.93■■□□□ 1.58
COL9A3-211ENST00000477612 GBF1Q92538 1859 aa24.92■■□□□ 1.58
COL9A3-211ENST00000477612 ESYT2A0FGR8 921 aa24.92■■□□□ 1.58
COL9A3-211ENST00000477612 IQCF3P0C7M6 154 aa24.92■■□□□ 1.58
COL9A3-211ENST00000477612 SCG2P13521 617 aa24.92■■□□□ 1.58
COL9A3-211ENST00000477612 RFC2P35250 354 aa24.92■■□□□ 1.58
COL9A3-211ENST00000477612 ADCY7P51828 1080 aa24.92■■□□□ 1.58
COL9A3-211ENST00000477612 AP3B2Q13367 1082 aa24.92■■□□□ 1.58
COL9A3-211ENST00000477612 C7orf31Q8N865 590 aa24.92■■□□□ 1.58
COL9A3-211ENST00000477612 ALG1Q9BT22 464 aa24.92■■□□□ 1.58
COL9A3-211ENST00000477612 RNF26Q9BY78 433 aaPredicted RBP24.92■■□□□ 1.58
COL9A3-211ENST00000477612 JADE2Q9NQC1 790 aa24.92■■□□□ 1.58
COL9A3-211ENST00000477612 NOD1Q9Y239 953 aa24.92■■□□□ 1.58
COL9A3-211ENST00000477612 TMEM265A0A087WTH1 108 aa24.91■■□□□ 1.58
COL9A3-211ENST00000477612 H3BRB1 525 aa24.91■■□□□ 1.58
COL9A3-211ENST00000477612 NOP56O00567 594 aaKnown RBP24.91■■□□□ 1.58
COL9A3-211ENST00000477612 ATP9AO75110 1047 aa24.91■■□□□ 1.58
COL9A3-211ENST00000477612 LGALS2P05162 132 aa24.91■■□□□ 1.58
COL9A3-211ENST00000477612 KCNA2P16389 499 aa24.91■■□□□ 1.58
COL9A3-211ENST00000477612 IFNAR1P17181 557 aa24.91■■□□□ 1.58
COL9A3-211ENST00000477612 CHMP4BP1P59074 171 aa24.91■■□□□ 1.58
COL9A3-211ENST00000477612 ZMYND12Q9H0C1 365 aa24.91■■□□□ 1.58
COL9A3-211ENST00000477612 TUT1Q9H6E5 874 aaKnown RBP24.91■■□□□ 1.58
COL9A3-211ENST00000477612 COL6A3P12111 3177 aa24.91■■□□□ 1.58
COL9A3-211ENST00000477612 HOXC8P31273 242 aa24.9■■□□□ 1.58
COL9A3-211ENST00000477612 ZNF697Q5TEC3 545 aa24.9■■□□□ 1.58
COL9A3-211ENST00000477612 CCDC155Q8N6L0 562 aa24.9■■□□□ 1.58
COL9A3-211ENST00000477612 RETREG2Q8NC44 543 aa24.9■■□□□ 1.58
COL9A3-211ENST00000477612 ZNF274Q96GC6 653 aaPredicted RBP24.9■■□□□ 1.58
COL9A3-211ENST00000477612 MXRA8Q9BRK3 442 aa24.9■■□□□ 1.58
COL9A3-211ENST00000477612 PTK7Q13308 1070 aa24.89■■□□□ 1.58
COL9A3-211ENST00000477612 MTMR1Q13613 665 aa24.89■■□□□ 1.58
COL9A3-211ENST00000477612 AFAP1L1Q8TED9 768 aa24.89■■□□□ 1.58
COL9A3-211ENST00000477612 DHX38Q92620 1227 aaKnown RBP24.89■■□□□ 1.58
COL9A3-211ENST00000477612 ANO3Q9BYT9 981 aa24.89■■□□□ 1.58
COL9A3-211ENST00000477612 MTIF3Q9H2K0 278 aaKnown RBP24.89■■□□□ 1.58
COL9A3-211ENST00000477612 SREBF1P36956 1147 aa24.88■■□□□ 1.57
COL9A3-211ENST00000477612 HIC1Q14526 733 aa24.88■■□□□ 1.57
COL9A3-211ENST00000477612 CCDC12Q8WUD4 166 aaPredicted RBP24.88■■□□□ 1.57
COL9A3-211ENST00000477612 CRYGNQ8WXF5 182 aa24.88■■□□□ 1.57
COL9A3-211ENST00000477612 PHKBQ93100 1093 aa24.88■■□□□ 1.57
COL9A3-211ENST00000477612 SEMA6BQ9H3T3 888 aa24.88■■□□□ 1.57
COL9A3-211ENST00000477612 CXXC1Q9P0U4 656 aaPredicted RBP24.88■■□□□ 1.57
COL9A3-211ENST00000477612 STXBP5LQ9Y2K9 1186 aa24.88■■□□□ 1.57
COL9A3-211ENST00000477612 TELO2Q9Y4R8 837 aa24.88■■□□□ 1.57
COL9A3-211ENST00000477612 PARNO95453 639 aaKnown RBP24.87■■□□□ 1.57
COL9A3-211ENST00000477612 ANAPC15P60006 121 aa24.87■■□□□ 1.57
COL9A3-211ENST00000477612 TRIM71Q2Q1W2 868 aaKnown RBP24.87■■□□□ 1.57
COL9A3-211ENST00000477612 MCTP2Q6DN12 878 aa24.87■■□□□ 1.57
COL9A3-211ENST00000477612 IL17RAQ96F46 866 aa24.87■■□□□ 1.57
COL9A3-211ENST00000477612 UPF3BQ9BZI7 483 aaKnown RBP24.87■■□□□ 1.57
COL9A3-211ENST00000477612 TTYH1Q9H313 450 aaPredicted RBP24.87■■□□□ 1.57
COL9A3-211ENST00000477612 CCT2P78371 535 aaKnown RBP24.86■■□□□ 1.57
COL9A3-211ENST00000477612 AKAP17AQ02040 695 aaKnown RBP24.86■■□□□ 1.57
COL9A3-211ENST00000477612 CEP55Q53EZ4 464 aa24.86■■□□□ 1.57
COL9A3-211ENST00000477612 OTOP2Q7RTS6 562 aa24.86■■□□□ 1.57
COL9A3-211ENST00000477612 SEPT1Q8WYJ6 367 aa24.86■■□□□ 1.57
COL9A3-211ENST00000477612 PGBD1Q96JS3 809 aa24.86■■□□□ 1.57
COL9A3-211ENST00000477612 GUCD1Q96NT3 240 aa24.86■■□□□ 1.57
COL9A3-211ENST00000477612 C6orf50Q9HD87 102 aa24.86■■□□□ 1.57
COL9A3-211ENST00000477612 KCNH7Q9NS40 1196 aa24.86■■□□□ 1.57
COL9A3-211ENST00000477612 TMEM260Q9NX78 707 aa24.86■■□□□ 1.57
COL9A3-211ENST00000477612 GSTTP1A0A1W2PQM5 241 aa24.85■■□□□ 1.57
COL9A3-211ENST00000477612 MEIS1O00470 390 aa24.85■■□□□ 1.57
COL9A3-211ENST00000477612 CYP3A4P08684 503 aa24.85■■□□□ 1.57
COL9A3-211ENST00000477612 CKBP12277 381 aa24.85■■□□□ 1.57
COL9A3-211ENST00000477612 SELPP16109 830 aa24.85■■□□□ 1.57
COL9A3-211ENST00000477612 DNAJB2P25686 324 aa24.85■■□□□ 1.57
COL9A3-211ENST00000477612 GNA11P29992 359 aa24.85■■□□□ 1.57
COL9A3-211ENST00000477612 ZNF200P98182 395 aaPredicted RBP24.85■■□□□ 1.57
COL9A3-211ENST00000477612 GPNMBQ14956 572 aa24.85■■□□□ 1.57
COL9A3-211ENST00000477612 CYP2W1Q8TAV3 490 aa24.85■■□□□ 1.57
COL9A3-211ENST00000477612 RNPEPQ9H4A4 650 aa24.85■■□□□ 1.57
COL9A3-211ENST00000477612 NCOA5Q9HCD5 579 aaKnown RBP24.85■■□□□ 1.57
COL9A3-211ENST00000477612 PDRG1Q9NUG6 133 aa24.85■■□□□ 1.57
COL9A3-211ENST00000477612 NFASCO94856 1347 aa24.85■■□□□ 1.57
COL9A3-211ENST00000477612 EIF5BO60841 1220 aaKnown RBP24.84■■□□□ 1.57
COL9A3-211ENST00000477612 SMIM10L2AP0DMW4 78 aa24.84■■□□□ 1.57
COL9A3-211ENST00000477612 SMIM10L2BP0DMW5 78 aa24.84■■□□□ 1.57
COL9A3-211ENST00000477612 TCF7P36402 384 aaPredicted RBP24.84■■□□□ 1.57
COL9A3-211ENST00000477612 ADAM17P78536 824 aa24.84■■□□□ 1.57
COL9A3-211ENST00000477612 LRRC8DQ7L1W4 858 aa24.84■■□□□ 1.57
COL9A3-211ENST00000477612 NIPA1Q7RTP0 329 aa24.84■■□□□ 1.57
COL9A3-211ENST00000477612 DEFB128Q7Z7B8 93 aa24.84■■□□□ 1.57
COL9A3-211ENST00000477612 SERINC5Q86VE9 423 aa24.84■■□□□ 1.57
COL9A3-211ENST00000477612 SLC26A6Q9BXS9 759 aa24.84■■□□□ 1.57
COL9A3-211ENST00000477612 PBX4Q9BYU1 374 aa24.84■■□□□ 1.57
COL9A3-211ENST00000477612 SH3GLB2Q9NR46 395 aa24.84■■□□□ 1.57
COL9A3-211ENST00000477612 ZNF215Q9UL58 517 aaPredicted RBP24.84■■□□□ 1.57
COL9A3-211ENST00000477612 CDH23Q9H251 3354 aa24.84■■□□□ 1.57
COL9A3-211ENST00000477612 C17orf102A2RUQ5 167 aa24.83■■□□□ 1.57
COL9A3-211ENST00000477612 GRXCR1A8MXD5 290 aa24.83■■□□□ 1.57
COL9A3-211ENST00000477612 ARHGAP4P98171 946 aa24.83■■□□□ 1.57
COL9A3-211ENST00000477612 JAKMIP3Q5VZ66 844 aa24.83■■□□□ 1.57
COL9A3-211ENST00000477612 TRAF7Q6Q0C0 670 aa24.83■■□□□ 1.57
COL9A3-211ENST00000477612 WNT8BQ93098 351 aa24.83■■□□□ 1.57
COL9A3-211ENST00000477612 PTPRSQ13332 1948 aa24.82■■□□□ 1.56
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms