RNA–Protein interactions for RNA: ENST00000477538.1

VHL-203, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

TSL 1 (best)

Gene VHL, Length 958 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-203ENST00000477538 GBP4Q96PP9 640 aa18.28■□□□□ 0.52
VHL-203ENST00000477538 RIT2Q99578 217 aa18.28■□□□□ 0.52
VHL-203ENST00000477538 SDF4Q9BRK5 362 aa18.28■□□□□ 0.52
VHL-203ENST00000477538 TEKT3Q9BXF9 490 aa18.28■□□□□ 0.52
VHL-203ENST00000477538 TTC12Q9H892 705 aaPredicted RBP18.28■□□□□ 0.52
VHL-203ENST00000477538 TBC1D22BQ9NU19 505 aa18.28■□□□□ 0.52
VHL-203ENST00000477538 PPP6R2O75170 966 aa18.27■□□□□ 0.52
VHL-203ENST00000477538 PSMD10O75832 226 aa18.27■□□□□ 0.52
VHL-203ENST00000477538 GGPS1O95749 300 aa18.27■□□□□ 0.52
VHL-203ENST00000477538 TNFAIP2Q03169 654 aa18.27■□□□□ 0.52
VHL-203ENST00000477538 NEDD9Q14511 834 aa18.27■□□□□ 0.52
VHL-203ENST00000477538 PKN2Q16513 984 aaKnown RBP18.27■□□□□ 0.52
VHL-203ENST00000477538 TMEM266Q2M3C6 531 aa18.27■□□□□ 0.52
VHL-203ENST00000477538 DUSP28Q4G0W2 176 aa18.27■□□□□ 0.52
VHL-203ENST00000477538 MAP3K21Q5TCX8 1036 aa18.27■□□□□ 0.52
VHL-203ENST00000477538 FBXO46Q6PJ61 603 aaPredicted RBP18.27■□□□□ 0.52
VHL-203ENST00000477538 DTHD1Q6ZMT9 781 aa18.27■□□□□ 0.52
VHL-203ENST00000477538 GIMAP8Q8ND71 665 aaPredicted RBP18.27■□□□□ 0.52
VHL-203ENST00000477538 SH3TC2Q8TF17 1288 aa18.27■□□□□ 0.52
VHL-203ENST00000477538 FERMT2Q96AC1 680 aa18.27■□□□□ 0.52
VHL-203ENST00000477538 PRDM10Q9NQV6 1147 aa18.27■□□□□ 0.52
VHL-203ENST00000477538 FBXO2Q9UK22 296 aaPredicted RBP18.27■□□□□ 0.52
VHL-203ENST00000477538 FAM184BQ9ULE4 1060 aa18.27■□□□□ 0.52
VHL-203ENST00000477538 PCDHA12Q9UN75 941 aa18.27■□□□□ 0.52
VHL-203ENST00000477538 VWA3AA6NCI4 1184 aa18.26■□□□□ 0.51
VHL-203ENST00000477538 DDX39AO00148 427 aaKnown RBP18.26■□□□□ 0.51
VHL-203ENST00000477538 NKRFO15226 690 aaKnown RBP eCLIP18.26■□□□□ 0.51
VHL-203ENST00000477538 DHX15O43143 795 aaKnown RBP18.26■□□□□ 0.51
VHL-203ENST00000477538 SORBS3O60504 671 aa18.26■□□□□ 0.51
VHL-203ENST00000477538 AKR1A1P14550 325 aa18.26■□□□□ 0.51
VHL-203ENST00000477538 SMPD1P17405 629 aa18.26■□□□□ 0.51
VHL-203ENST00000477538 CNGA1P29973 690 aa18.26■□□□□ 0.51
VHL-203ENST00000477538 TECP42680 631 aa18.26■□□□□ 0.51
VHL-203ENST00000477538 IL17AQ16552 155 aa18.26■□□□□ 0.51
VHL-203ENST00000477538 SLC9C1Q4G0N8 1177 aa18.26■□□□□ 0.51
VHL-203ENST00000477538 TMEM63BQ5T3F8 832 aa18.26■□□□□ 0.51
VHL-203ENST00000477538 KRI1Q8N9T8 703 aaKnown RBP18.26■□□□□ 0.51
VHL-203ENST00000477538 COPS5Q92905 334 aa18.26■□□□□ 0.51
VHL-203ENST00000477538 TCEAL9Q9UHQ7 104 aa18.26■□□□□ 0.51
VHL-203ENST00000477538 SRPRBQ9Y5M8 271 aaKnown RBP18.26■□□□□ 0.51
VHL-203ENST00000477538 ARID2Q68CP9 1835 aa18.26■□□□□ 0.51
VHL-203ENST00000477538 SEPT4O43236 478 aa18.25■□□□□ 0.51
VHL-203ENST00000477538 ADCY6O43306 1168 aa18.25■□□□□ 0.51
VHL-203ENST00000477538 GH1P01241 217 aa18.25■□□□□ 0.51
VHL-203ENST00000477538 CCND3P30281 292 aaPredicted RBP18.25■□□□□ 0.51
VHL-203ENST00000477538 ME1P48163 572 aa18.25■□□□□ 0.51
VHL-203ENST00000477538 FXR2P51116 673 aaKnown RBP eCLIP18.25■□□□□ 0.51
VHL-203ENST00000477538 CSPP1Q1MSJ5 1256 aa18.25■□□□□ 0.51
VHL-203ENST00000477538 CELF3Q5SZQ8 465 aaKnown RBP18.25■□□□□ 0.51
VHL-203ENST00000477538 GJC2Q5T442 439 aaPredicted RBP18.25■□□□□ 0.51
VHL-203ENST00000477538 CYFIP1Q7L576 1253 aa18.25■□□□□ 0.51
VHL-203ENST00000477538 DHX37Q8IY37 1157 aaKnown RBP18.25■□□□□ 0.51
VHL-203ENST00000477538 BCAS3Q9H6U6 928 aa18.25■□□□□ 0.51
VHL-203ENST00000477538 MLXIPQ9HAP2 919 aa18.25■□□□□ 0.51
VHL-203ENST00000477538 JPH1Q9HDC5 661 aaPredicted RBP18.25■□□□□ 0.51
VHL-203ENST00000477538 SLC9A2Q9UBY0 812 aa18.25■□□□□ 0.51
VHL-203ENST00000477538 VAV3Q9UKW4 847 aa18.25■□□□□ 0.51
VHL-203ENST00000477538 ELP1O95163 1332 aa18.24■□□□□ 0.51
VHL-203ENST00000477538 POTEMA6NI47 508 aa18.24■□□□□ 0.51
VHL-203ENST00000477538 CUTAO60888 179 aa18.24■□□□□ 0.51
VHL-203ENST00000477538 FARP2O94887 1054 aaPredicted RBP18.24■□□□□ 0.51
VHL-203ENST00000477538 KRT76Q01546 638 aa18.24■□□□□ 0.51
VHL-203ENST00000477538 SP4Q02446 784 aa18.24■□□□□ 0.51
VHL-203ENST00000477538 GRIN1Q05586 938 aa18.24■□□□□ 0.51
VHL-203ENST00000477538 SPIRE1Q08AE8 756 aa18.24■□□□□ 0.51
VHL-203ENST00000477538 PPP2R5CQ13362 524 aa18.24■□□□□ 0.51
VHL-203ENST00000477538 METTL7BQ6UX53 244 aa18.24■□□□□ 0.51
VHL-203ENST00000477538 LENG1Q96BZ8 264 aaPredicted RBP18.24■□□□□ 0.51
VHL-203ENST00000477538 CLIC6Q96NY7 704 aa18.24■□□□□ 0.51
VHL-203ENST00000477538 RAB34Q9BZG1 259 aa18.24■□□□□ 0.51
VHL-203ENST00000477538 UNC45AQ9H3U1 944 aa18.24■□□□□ 0.51
VHL-203ENST00000477538 PCDHA7Q9UN72 937 aa18.24■□□□□ 0.51
VHL-203ENST00000477538 GNEQ9Y223 722 aaKnown RBP18.24■□□□□ 0.51
VHL-203ENST00000477538 CHMP2AO43633 222 aa18.23■□□□□ 0.51
VHL-203ENST00000477538 PTGS1P23219 599 aa18.23■□□□□ 0.51
VHL-203ENST00000477538 ARHGAP1Q07960 439 aa18.23■□□□□ 0.51
VHL-203ENST00000477538 PDIA5Q14554 519 aa18.23■□□□□ 0.51
VHL-203ENST00000477538 NCAPH2Q6IBW4 605 aa18.23■□□□□ 0.51
VHL-203ENST00000477538 ZNF746Q6NUN9 644 aaPredicted RBP18.23■□□□□ 0.51
VHL-203ENST00000477538 B3GNT9Q6UX72 402 aa18.23■□□□□ 0.51
VHL-203ENST00000477538 TLK2Q86UE8 772 aa18.23■□□□□ 0.51
VHL-203ENST00000477538 IGSF22Q8N9C0 903 aa18.23■□□□□ 0.51
VHL-203ENST00000477538 OR6J1Q8NGC5 347 aa18.23■□□□□ 0.51
VHL-203ENST00000477538 CSRNP2Q9H175 543 aa18.23■□□□□ 0.51
VHL-203ENST00000477538 HMX1Q9NP08 348 aaPredicted RBP18.23■□□□□ 0.51
VHL-203ENST00000477538 HTTP42858 3142 aa18.22■□□□□ 0.51
VHL-203ENST00000477538 DUSP11O75319 330 aaKnown RBP18.22■□□□□ 0.51
VHL-203ENST00000477538 CCNE2O96020 404 aa18.22■□□□□ 0.51
VHL-203ENST00000477538 LONP1P36776 959 aaKnown RBP18.22■□□□□ 0.51
VHL-203ENST00000477538 LAMC2Q13753 1193 aa18.22■□□□□ 0.51
VHL-203ENST00000477538 AXDND1Q5T1B0 1012 aaPredicted RBP18.22■□□□□ 0.51
VHL-203ENST00000477538 MIER3Q7Z3K6 550 aa18.22■□□□□ 0.51
VHL-203ENST00000477538 TMEM87AQ8NBN3 555 aa18.22■□□□□ 0.51
VHL-203ENST00000477538 EMID1Q96A84 441 aaPredicted RBP18.22■□□□□ 0.51
VHL-203ENST00000477538 LRWD1Q9UFC0 647 aa18.22■□□□□ 0.51
VHL-203ENST00000477538 MYH11P35749 1972 aa18.22■□□□□ 0.51
VHL-203ENST00000477538 WDR64B1ANS9 1081 aa18.21■□□□□ 0.51
VHL-203ENST00000477538 EML1O00423 815 aa18.21■□□□□ 0.51
VHL-203ENST00000477538 NOP56O00567 594 aaKnown RBP18.21■□□□□ 0.51
VHL-203ENST00000477538 RARBP10826 455 aa18.21■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms