RNA–Protein interactions for RNA: ENST00000477487.5

TNRC6A-206, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 1 (best)

Gene TNRC6A, Length 2,740 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-206ENST00000477487 XPO4Q9C0E2 1151 aaKnown RBP13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 UNC45AQ9H3U1 944 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 NFE2L3Q9Y4A8 694 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 RPTORQ8N122 1335 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 KIAA1217Q5T5P2 1943 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 IQCA1LA6NCM1 817 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 PSMD10O75832 226 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 GOLGA8FQ08AF8 430 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 GOLGA8DPQ0D2H9 430 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 PABPC4Q13310 644 aaKnown RBP eCLIP13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 LRRC41Q15345 812 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 CDK5RAP3Q96JB5 506 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 SLC39A2Q9NP94 309 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 KCNH7Q9NS40 1196 aa13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 HOOK1Q9UJC3 728 aaKnown RBP13.25□□□□□ -0.29
TNRC6A-206ENST00000477487 CNMDO75829 334 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 RGS20O76081 388 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 SMC2O95347 1197 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 NF2P35240 595 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 MYL5Q02045 173 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 ORC2Q13416 577 aaPredicted RBP13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 LRCH2Q5VUJ6 765 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 GPAT2Q6NUI2 795 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 OTOP1Q7RTM1 612 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 RETREG2Q8NC44 543 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 DYDC2Q96IM9 177 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 GSDMAQ96QA5 445 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 PDCD2LQ9BRP1 358 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 ZNF577Q9BSK1 485 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 PXMP2Q9NR77 195 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 INTS13Q9NVM9 706 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 IDEP14735 1019 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 PPATQ06203 517 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 LRMPQ12912 555 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 TKFCQ3LXA3 575 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 LDLRAD1Q5T700 205 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 BANK1Q8NDB2 785 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 DDX12PQ92771 950 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 EIF2AK1Q9BQI3 630 aaKnown RBP13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 MXRA8Q9BRK3 442 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 NAT10Q9H0A0 1025 aaKnown RBP13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 KCNF1Q9H3M0 494 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 CYP39A1Q9NYL5 469 aa13.24□□□□□ -0.29
TNRC6A-206ENST00000477487 TESPA1A2RU30 521 aaPredicted RBP13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 ERCC3P19447 782 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 SEMA3FQ13275 785 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 ARSHQ5FYA8 562 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 MOXD1Q6UVY6 613 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 LBX2Q6XYB7 198 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 KIAA0895Q8NCT3 520 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 BPIFA3Q9BQP9 254 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 TEX13BQ9BXU2 312 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 LOC285556D6RIA3 1793 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 CEP350Q5VT06 3117 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 RSPH10B2B2RC85 870 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 IPO5O00410 1097 aaKnown RBP13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 DHX15O43143 795 aaKnown RBP13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 RSPH10BP0C881 870 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 SP4Q02446 784 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 PDE4DQ08499 809 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 ARHGEF16Q5VV41 709 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 CST9Q5W186 159 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 SLC5A5Q92911 643 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 IKZF4Q9H2S9 585 aa13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.23□□□□□ -0.29
TNRC6A-206ENST00000477487 CELF2O95319 508 aaKnown RBP13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 PGK2P07205 417 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 HERVK_113P62684 666 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 FANCCQ00597 558 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 SV2BQ7L1I2 683 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 PNMA8AQ86V59 439 aaPredicted RBP13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 CREBRFQ8IUR6 639 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 TPH2Q8IWU9 490 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 MLKLQ8NB16 471 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 DNAJC19Q96DA6 116 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 BMP2KQ9NSY1 1161 aaPredicted RBP13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 HOXC10Q9NYD6 342 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 RBPJLQ9UBG7 517 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 MCM3APO60318 1980 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 SFI1A8K8P3 1242 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 GAS7O60861 476 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 PLA2G4BP0C869 781 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 CCDC186Q7Z3E2 898 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 NCAPG2Q86XI2 1143 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 DRC7Q8IY82 874 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 SLFN12Q8IYM2 578 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 RBM46Q8TBY0 533 aaKnown RBP13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 SLC10A4Q96EP9 437 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 C7orf25Q9BPX7 421 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 KCNH4Q9UQ05 1017 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 UBIAD1Q9Y5Z9 338 aa13.22□□□□□ -0.29
TNRC6A-206ENST00000477487 SLITRK3O94933 977 aa13.21□□□□□ -0.29
TNRC6A-206ENST00000477487 IRX3P78415 501 aaPredicted RBP13.21□□□□□ -0.29
TNRC6A-206ENST00000477487 TMEM63BQ5T3F8 832 aa13.21□□□□□ -0.29
TNRC6A-206ENST00000477487 ZNF658Q5TYW1 1059 aaPredicted RBP13.21□□□□□ -0.29
TNRC6A-206ENST00000477487 EEPD1Q7L9B9 569 aa13.21□□□□□ -0.29
TNRC6A-206ENST00000477487 ARMC9Q7Z3E5 817 aa13.21□□□□□ -0.29
TNRC6A-206ENST00000477487 FILIP1Q7Z7B0 1213 aa13.21□□□□□ -0.29
TNRC6A-206ENST00000477487 MCF2L2Q86YR7 1114 aa13.21□□□□□ -0.29
TNRC6A-206ENST00000477487 HS6ST3Q8IZP7 471 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms