RNA–Protein interactions for RNA: ENST00000477237.1

XRN1-211, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 686 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-211ENST00000477237 ZNF483Q8TF39 744 aaPredicted RBP4.78□□□□□ -1.64
XRN1-211ENST00000477237 FRS2Q8WU20 508 aa4.78□□□□□ -1.64
XRN1-211ENST00000477237 AKT3Q9Y243 479 aa4.78□□□□□ -1.64
XRN1-211ENST00000477237 KNG1P01042 644 aa4.77□□□□□ -1.65
XRN1-211ENST00000477237 KRT4P19013 534 aa4.77□□□□□ -1.65
XRN1-211ENST00000477237 MAKP20794 623 aa4.77□□□□□ -1.65
XRN1-211ENST00000477237 ACRV1P26436 265 aa4.77□□□□□ -1.65
XRN1-211ENST00000477237 SLC7A5Q01650 507 aa4.77□□□□□ -1.65
XRN1-211ENST00000477237 CYP4F3Q08477 520 aa4.77□□□□□ -1.65
XRN1-211ENST00000477237 SMAD2Q15796 467 aaKnown RBP4.77□□□□□ -1.65
XRN1-211ENST00000477237 STEAP3Q658P3 488 aa4.77□□□□□ -1.65
XRN1-211ENST00000477237 POLNQ7Z5Q5 900 aa4.77□□□□□ -1.65
XRN1-211ENST00000477237 IFNL2Q8IZJ0 200 aa4.77□□□□□ -1.65
XRN1-211ENST00000477237 DTX3Q8N9I9 347 aa4.77□□□□□ -1.65
XRN1-211ENST00000477237 KLHL6Q8WZ60 621 aa4.77□□□□□ -1.65
XRN1-211ENST00000477237 HSPBP1Q9NZL4 362 aa4.77□□□□□ -1.65
XRN1-211ENST00000477237 FBXL7Q9UJT9 491 aa4.77□□□□□ -1.65
XRN1-211ENST00000477237 ARNTLO00327 626 aa4.76□□□□□ -1.65
XRN1-211ENST00000477237 RAMP2O60895 175 aa4.76□□□□□ -1.65
XRN1-211ENST00000477237 ZNF888P0CJ79 500 aaPredicted RBP4.76□□□□□ -1.65
XRN1-211ENST00000477237 ITGAEP38570 1179 aa4.76□□□□□ -1.65
XRN1-211ENST00000477237 CHRNA2Q15822 529 aa4.76□□□□□ -1.65
XRN1-211ENST00000477237 CCDC142Q17RM4 750 aa4.76□□□□□ -1.65
XRN1-211ENST00000477237 EMC4Q5J8M3 183 aa4.76□□□□□ -1.65
XRN1-211ENST00000477237 Q6ZPA2 131 aa4.76□□□□□ -1.65
XRN1-211ENST00000477237 NPLOC4Q8TAT6 608 aa4.76□□□□□ -1.65
XRN1-211ENST00000477237 CLIP3Q96DZ5 547 aa4.76□□□□□ -1.65
XRN1-211ENST00000477237 TMEM169Q96HH4 297 aa4.76□□□□□ -1.65
XRN1-211ENST00000477237 KATNBL1Q9H079 304 aa4.76□□□□□ -1.65
XRN1-211ENST00000477237 PHAXQ9H814 394 aaKnown RBP4.76□□□□□ -1.65
XRN1-211ENST00000477237 APEX2Q9UBZ4 518 aa4.76□□□□□ -1.65
XRN1-211ENST00000477237 TIMELESSQ9UNS1 1208 aa4.76□□□□□ -1.65
XRN1-211ENST00000477237 EMC9Q9Y3B6 208 aa4.76□□□□□ -1.65
XRN1-211ENST00000477237 SLC30A1Q9Y6M5 507 aa4.76□□□□□ -1.65
XRN1-211ENST00000477237 PATL2C9JE40 543 aaKnown RBP4.75□□□□□ -1.65
XRN1-211ENST00000477237 BMP5P22003 454 aa4.75□□□□□ -1.65
XRN1-211ENST00000477237 FBLP22087 321 aaKnown RBP4.75□□□□□ -1.65
XRN1-211ENST00000477237 RAC3P60763 192 aa4.75□□□□□ -1.65
XRN1-211ENST00000477237 CCDC103Q8IW40 242 aa4.75□□□□□ -1.65
XRN1-211ENST00000477237 ZNF808Q8N4W9 903 aaPredicted RBP4.75□□□□□ -1.65
XRN1-211ENST00000477237 FAM89AQ96GI7 184 aa4.75□□□□□ -1.65
XRN1-211ENST00000477237 COA3Q9Y2R0 106 aaPredicted RBP4.75□□□□□ -1.65
XRN1-211ENST00000477237 CHGBP05060 677 aa4.74□□□□□ -1.65
XRN1-211ENST00000477237 CR2P20023 1033 aa4.74□□□□□ -1.65
XRN1-211ENST00000477237 USP10Q14694 798 aaKnown RBP4.74□□□□□ -1.65
XRN1-211ENST00000477237 RNF151Q2KHN1 245 aa4.74□□□□□ -1.65
XRN1-211ENST00000477237 IQCEQ6IPM2 695 aa4.74□□□□□ -1.65
XRN1-211ENST00000477237 SND1Q7KZF4 910 aaKnown RBP eCLIP4.74□□□□□ -1.65
XRN1-211ENST00000477237 GLCCI1Q86VQ1 547 aa4.74□□□□□ -1.65
XRN1-211ENST00000477237 REXO1L1PQ8IX06 675 aa4.74□□□□□ -1.65
XRN1-211ENST00000477237 TTPALQ9BTX7 342 aa4.74□□□□□ -1.65
XRN1-211ENST00000477237 MYOTQ9UBF9 498 aa4.74□□□□□ -1.65
XRN1-211ENST00000477237 OAZ3Q9UMX2 235 aa4.74□□□□□ -1.65
XRN1-211ENST00000477237 SLC12A7Q9Y666 1083 aa4.74□□□□□ -1.65
XRN1-211ENST00000477237 A0A1W2PQH9 124 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 KRTAP29-1A8MX34 341 aaPredicted RBP4.73□□□□□ -1.65
XRN1-211ENST00000477237 FBXO21O94952 628 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 GLRBP48167 497 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 GTF2A2P52657 109 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 KRTAP10-11P60412 298 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 DUSP8Q13202 625 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 GTF2IRD2BQ6EKJ0 949 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 VASNQ6EMK4 673 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 GTF2IRD2Q86UP8 949 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 ULK2Q8IYT8 1036 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.73□□□□□ -1.65
XRN1-211ENST00000477237 DIO2Q92813 273 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 OR14A2Q96R54 314 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 PRRX2Q99811 253 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 DPYSL5Q9BPU6 564 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 CYP26B1Q9NR63 512 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 KCND1Q9NSA2 647 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 ZFP69BQ9UJL9 534 aa4.73□□□□□ -1.65
XRN1-211ENST00000477237 CKMP06732 381 aa4.72□□□□□ -1.65
XRN1-211ENST00000477237 NOLC1Q14978 699 aaKnown RBP eCLIP4.72□□□□□ -1.65
XRN1-211ENST00000477237 CCDC81Q6ZN84 652 aa4.72□□□□□ -1.65
XRN1-211ENST00000477237 ERICH6Q7L0X2 663 aa4.72□□□□□ -1.65
XRN1-211ENST00000477237 STPG3Q8N7X2 389 aa4.72□□□□□ -1.65
XRN1-211ENST00000477237 ZNF703Q9H7S9 590 aaPredicted RBP4.72□□□□□ -1.65
XRN1-211ENST00000477237 SLC2A4RGQ9NR83 387 aa4.72□□□□□ -1.65
XRN1-211ENST00000477237 CEP72Q9P209 647 aa4.72□□□□□ -1.65
XRN1-211ENST00000477237 REXO2Q9Y3B8 237 aaKnown RBP4.72□□□□□ -1.65
XRN1-211ENST00000477237 H7BY64 318 aa4.71□□□□□ -1.66
XRN1-211ENST00000477237 MATN2O00339 956 aa4.71□□□□□ -1.66
XRN1-211ENST00000477237 FOXN1O15353 648 aa4.71□□□□□ -1.66
XRN1-211ENST00000477237 CDC14BO60729 498 aa4.71□□□□□ -1.66
XRN1-211ENST00000477237 SKIDA1Q1XH10 827 aa4.71□□□□□ -1.66
XRN1-211ENST00000477237 ZNF568Q3ZCX4 644 aa4.71□□□□□ -1.66
XRN1-211ENST00000477237 E4F1Q66K89 784 aaPredicted RBP4.71□□□□□ -1.66
XRN1-211ENST00000477237 POMZP3Q6PJE2 187 aa4.71□□□□□ -1.66
XRN1-211ENST00000477237 TRIM59Q8IWR1 403 aa4.71□□□□□ -1.66
XRN1-211ENST00000477237 RCBTB1Q8NDN9 531 aa4.71□□□□□ -1.66
XRN1-211ENST00000477237 BVESQ8NE79 360 aa4.71□□□□□ -1.66
XRN1-211ENST00000477237 TRAIPQ9BWF2 469 aa4.71□□□□□ -1.66
XRN1-211ENST00000477237 PLA2G12BQ9BX93 195 aa4.71□□□□□ -1.66
XRN1-211ENST00000477237 LGR4Q9BXB1 951 aa4.71□□□□□ -1.66
XRN1-211ENST00000477237 NKX2-4Q9H2Z4 354 aa4.71□□□□□ -1.66
XRN1-211ENST00000477237 SMOC1Q9H4F8 434 aa4.71□□□□□ -1.66
XRN1-211ENST00000477237 ASH2LQ9UBL3 628 aa4.71□□□□□ -1.66
XRN1-211ENST00000477237 ANKRD34BA5PLL1 514 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms