RNA–Protein interactions for RNA: ENST00000477152.5

BRCA1-214, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,980 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-214ENST00000477152 DNMT3AQ9Y6K1 912 aaPredicted RBP8.55□□□□□ -1.04
BRCA1-214ENST00000477152 M0R2C6 588 aa8.54□□□□□ -1.04
BRCA1-214ENST00000477152 PRDM1O75626 825 aa8.54□□□□□ -1.04
BRCA1-214ENST00000477152 ADH1AP07327 375 aa8.54□□□□□ -1.04
BRCA1-214ENST00000477152 PCP11498 1178 aaKnown RBP8.54□□□□□ -1.04
BRCA1-214ENST00000477152 ALAS1P13196 640 aa8.54□□□□□ -1.04
BRCA1-214ENST00000477152 TIMP2P16035 220 aa8.54□□□□□ -1.04
BRCA1-214ENST00000477152 MX1P20591 662 aa8.54□□□□□ -1.04
BRCA1-214ENST00000477152 CCDC144CPQ8IYA2 1237 aa8.54□□□□□ -1.04
BRCA1-214ENST00000477152 EVI5LQ96CN4 794 aa8.54□□□□□ -1.04
BRCA1-214ENST00000477152 VTA1Q9NP79 307 aa8.54□□□□□ -1.04
BRCA1-214ENST00000477152 HOMER2Q9NSB8 354 aa8.54□□□□□ -1.04
BRCA1-214ENST00000477152 SCHIP1Q9P0W5 487 aaPredicted RBP8.54□□□□□ -1.04
BRCA1-214ENST00000477152 RIPK3Q9Y572 518 aa8.54□□□□□ -1.04
BRCA1-214ENST00000477152 A6NJY4 79 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 BACH1O14867 736 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 RANBP6O60518 1105 aaKnown RBP8.53□□□□□ -1.04
BRCA1-214ENST00000477152 SUPT20HL2P0C7V6 817 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 SMTNP53814 917 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 NKX3-2P78367 333 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 CCDC96Q2M329 555 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 CCDC178Q5BJE1 867 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 ZMYM1Q5SVZ6 1142 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 TIFAQ96CG3 184 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 HELLSQ9NRZ9 838 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 TOMM22Q9NS69 142 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 MCM3APO60318 1980 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 KPNA6O60684 536 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 MCCP23508 829 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 CPT1AP50416 773 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 CDK7P50613 346 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 AAMPQ13685 434 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 SH3PXD2AQ5TCZ1 1133 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 CCSAPQ6IQ19 270 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-214ENST00000477152 Q6ZVU0 165 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 TLK2Q86UE8 772 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 SLC9A9Q8IVB4 645 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 FAM133AQ8N9E0 248 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 MYLIPQ8WY64 445 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 MAF1Q9H063 256 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 SAP130Q9H0E3 1048 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 EPB41L4AQ9HCS5 686 aaPredicted RBP8.53□□□□□ -1.04
BRCA1-214ENST00000477152 TBX21Q9UL17 535 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 CCPG1Q9ULG6 757 aa8.53□□□□□ -1.04
BRCA1-214ENST00000477152 H3BRB1 525 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 MEN1O00255 615 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 NKRFO15226 690 aaKnown RBP eCLIP8.52□□□□□ -1.05
BRCA1-214ENST00000477152 FGBP02675 491 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 PFKMP08237 780 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 FOXK2Q01167 660 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 FSCN1Q16658 493 aaKnown RBP8.52□□□□□ -1.05
BRCA1-214ENST00000477152 TTC14Q96N46 770 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 RNF41Q9H4P4 317 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-214ENST00000477152 ZNF576Q9H609 170 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 TUT1Q9H6E5 874 aaKnown RBP8.52□□□□□ -1.05
BRCA1-214ENST00000477152 IL23AQ9NPF7 189 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 A1CFQ9NQ94 594 aaKnown RBP8.52□□□□□ -1.05
BRCA1-214ENST00000477152 ANAPC4Q9UJX5 808 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 HRH3Q9Y5N1 445 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 SMIM22K7EJ46 135 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 ORC4O43929 436 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 CHGBP05060 677 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 ICAM1P05362 532 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 TOP1P11387 765 aaKnown RBP8.52□□□□□ -1.05
BRCA1-214ENST00000477152 ACTN1P12814 892 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 IGFBP4P22692 258 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 ITGA7Q13683 1181 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 TLR1Q15399 786 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 ALX1Q15699 326 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 C20orf194Q5TEA3 1177 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 NSMFQ6X4W1 530 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 FAM126BQ8IXS8 530 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 ESYT1Q9BSJ8 1104 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 COL25A1Q9BXS0 654 aaPredicted RBP8.52□□□□□ -1.05
BRCA1-214ENST00000477152 HIPK3Q9H422 1215 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 PRR12Q9ULL5 1215 aa8.52□□□□□ -1.05
BRCA1-214ENST00000477152 DYNC1LI2O43237 492 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-214ENST00000477152 ECM1Q16610 540 aa8.51□□□□□ -1.05
BRCA1-214ENST00000477152 MCMDC2Q4G0Z9 681 aa8.51□□□□□ -1.05
BRCA1-214ENST00000477152 ANKRD45Q5TZF3 282 aa8.51□□□□□ -1.05
BRCA1-214ENST00000477152 KIAA1211Q6ZU35 1233 aa8.51□□□□□ -1.05
BRCA1-214ENST00000477152 KCTD1Q719H9 257 aa8.51□□□□□ -1.05
BRCA1-214ENST00000477152 PI4K2BQ8TCG2 481 aa8.51□□□□□ -1.05
BRCA1-214ENST00000477152 LENG1Q96BZ8 264 aaPredicted RBP8.51□□□□□ -1.05
BRCA1-214ENST00000477152 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.51□□□□□ -1.05
BRCA1-214ENST00000477152 SLC28A3Q9HAS3 691 aa8.51□□□□□ -1.05
BRCA1-214ENST00000477152 TCP11L1Q9NUJ3 509 aa8.51□□□□□ -1.05
BRCA1-214ENST00000477152 CYP39A1Q9NYL5 469 aa8.51□□□□□ -1.05
BRCA1-214ENST00000477152 PTPDC1A2A3K4 754 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 RFC2P35250 354 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 PTGIRP43119 386 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 CNTN2Q02246 1040 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 RRP12Q5JTH9 1297 aaKnown RBP8.5□□□□□ -1.05
BRCA1-214ENST00000477152 TMEM240Q5SV17 173 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 AKNAD1Q5T1N1 836 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 SYDE2Q5VT97 1194 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 TSHZ3Q63HK5 1081 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 MFSD6Q6ZSS7 791 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 CCDC155Q8N6L0 562 aa8.5□□□□□ -1.05
BRCA1-214ENST00000477152 HERVK_113Q902F9 699 aa8.5□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms