RNA–Protein interactions for RNA: ENST00000476742.1

NPHP3-207, Transcript of nephrocystin 3, humanhuman

TSL 3

Gene NPHP3, Length 650 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-207ENST00000476742 NCOA5Q9HCD5 579 aaKnown RBP4.76□□□□□ -1.65
NPHP3-207ENST00000476742 TMEM260Q9NX78 707 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 MYOTQ9UBF9 498 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 PCDHA9Q9Y5H5 950 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 PCDHA8Q9Y5H6 950 aa4.76□□□□□ -1.65
NPHP3-207ENST00000476742 TADA3O75528 432 aa4.75□□□□□ -1.65
NPHP3-207ENST00000476742 PI3P19957 117 aa4.75□□□□□ -1.65
NPHP3-207ENST00000476742 FBLN1P23142 703 aa4.75□□□□□ -1.65
NPHP3-207ENST00000476742 FOXO4P98177 505 aa4.75□□□□□ -1.65
NPHP3-207ENST00000476742 CACNB2Q08289 660 aaPredicted RBP4.75□□□□□ -1.65
NPHP3-207ENST00000476742 SQSTM1Q13501 440 aa4.75□□□□□ -1.65
NPHP3-207ENST00000476742 FNDC3BQ53EP0 1204 aaKnown RBP4.75□□□□□ -1.65
NPHP3-207ENST00000476742 TRIM61Q5EBN2 209 aa4.75□□□□□ -1.65
NPHP3-207ENST00000476742 CNKSR3Q6P9H4 555 aa4.75□□□□□ -1.65
NPHP3-207ENST00000476742 EP400NLQ6ZTU2 488 aa4.75□□□□□ -1.65
NPHP3-207ENST00000476742 ZC3H7AQ8IWR0 971 aaKnown RBP4.75□□□□□ -1.65
NPHP3-207ENST00000476742 FAM126BQ8IXS8 530 aa4.75□□□□□ -1.65
NPHP3-207ENST00000476742 ZCCHC4Q9H5U6 513 aa4.75□□□□□ -1.65
NPHP3-207ENST00000476742 CATSPERZQ9NTU4 200 aa4.75□□□□□ -1.65
NPHP3-207ENST00000476742 RTEL1Q9NZ71 1219 aa4.75□□□□□ -1.65
NPHP3-207ENST00000476742 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.74□□□□□ -1.65
NPHP3-207ENST00000476742 TCRBV5S2A0A599 114 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 ESYT3A0FGR9 886 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 ARVCFO00192 962 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 WNT9AO14904 365 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 ASMTLO95671 621 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 SRGAP2CP0DJJ0 459 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 CYP2C8P10632 490 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 COL6A2P12110 1019 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 ATF2P15336 505 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 IGFBP6P24592 240 aaPredicted RBP4.74□□□□□ -1.65
NPHP3-207ENST00000476742 MC3RP41968 323 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 NKX3-2P78367 333 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 SSPNQ14714 243 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 TCEA2Q15560 299 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 CRY1Q16526 586 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 TCERG1LQ5VWI1 586 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 CD300LDQ6UXZ3 194 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 B3GNT8Q7Z7M8 397 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 FAM129CQ86XR2 697 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 MIB1Q86YT6 1006 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 GSTCDQ8NEC7 633 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 PCDH19Q8TAB3 1148 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 SMARCC2Q8TAQ2 1214 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 SLC7A14Q8TBB6 771 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 APPBP2Q92624 585 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 TOE1Q96GM8 510 aaKnown RBP4.74□□□□□ -1.65
NPHP3-207ENST00000476742 RNPC3Q96LT9 517 aaKnown RBP4.74□□□□□ -1.65
NPHP3-207ENST00000476742 IRF2BPLQ9H1B7 796 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 ASH2LQ9UBL3 628 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 PLA2G2DQ9UNK4 145 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 PMF1-BGLAPU3KQ54 211 aa4.74□□□□□ -1.65
NPHP3-207ENST00000476742 B4E1Z4 1266 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 SLC27A2O14975 620 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 KCNQ2O43526 872 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 RAPGEF3O95398 923 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 NPTXRO95502 500 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 LIMS1P48059 325 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 GPR19Q15760 415 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 C16orf59Q7L2K0 433 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 BRAPQ7Z569 592 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 TMEFF1Q8IYR6 380 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 NLGN4XQ8N0W4 816 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 ARRDC4Q8NCT1 418 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 UHMK1Q8TAS1 419 aaKnown RBP4.73□□□□□ -1.65
NPHP3-207ENST00000476742 PWWP2AQ96N64 755 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 MENTQ9BUN1 341 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 KANSL2Q9H9L4 492 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 DTLQ9NZJ0 730 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 DSEQ9UL01 958 aa4.73□□□□□ -1.65
NPHP3-207ENST00000476742 NKRFO15226 690 aaKnown RBP eCLIP4.72□□□□□ -1.65
NPHP3-207ENST00000476742 CDC45O75419 566 aa4.72□□□□□ -1.65
NPHP3-207ENST00000476742 RASGRP1O95267 797 aa4.72□□□□□ -1.65
NPHP3-207ENST00000476742 PYGMP11217 842 aa4.72□□□□□ -1.65
NPHP3-207ENST00000476742 DNM2P50570 870 aa4.72□□□□□ -1.65
NPHP3-207ENST00000476742 AFF3P51826 1226 aaKnown RBP4.72□□□□□ -1.65
NPHP3-207ENST00000476742 TUSC3Q13454 348 aa4.72□□□□□ -1.65
NPHP3-207ENST00000476742 HABP4Q5JVS0 413 aaKnown RBP4.72□□□□□ -1.65
NPHP3-207ENST00000476742 C16orf86Q6ZW13 317 aa4.72□□□□□ -1.65
NPHP3-207ENST00000476742 PNPLA5Q7Z6Z6 429 aaPredicted RBP4.72□□□□□ -1.65
NPHP3-207ENST00000476742 FANCLQ9NW38 375 aa4.72□□□□□ -1.65
NPHP3-207ENST00000476742 MRPL42Q9Y6G3 142 aaKnown RBP4.72□□□□□ -1.65
NPHP3-207ENST00000476742 TCRBV16S1A1N1A0A5B0 115 aa4.71□□□□□ -1.66
NPHP3-207ENST00000476742 CCDC66A2RUB6 948 aa4.71□□□□□ -1.66
NPHP3-207ENST00000476742 PPP1R12AO14974 1030 aaPredicted RBP4.71□□□□□ -1.66
NPHP3-207ENST00000476742 SMARCA5O60264 1052 aaPredicted RBP4.71□□□□□ -1.66
NPHP3-207ENST00000476742 OPA1O60313 960 aa4.71□□□□□ -1.66
NPHP3-207ENST00000476742 RFPL3O75679 317 aa4.71□□□□□ -1.66
NPHP3-207ENST00000476742 C8BP07358 591 aa4.71□□□□□ -1.66
NPHP3-207ENST00000476742 CELA3BP08861 270 aa4.71□□□□□ -1.66
NPHP3-207ENST00000476742 KRT15P19012 456 aa4.71□□□□□ -1.66
NPHP3-207ENST00000476742 FLT3P36888 993 aa4.71□□□□□ -1.66
NPHP3-207ENST00000476742 STAT5AP42229 794 aa4.71□□□□□ -1.66
NPHP3-207ENST00000476742 CAP1Q01518 475 aa4.71□□□□□ -1.66
NPHP3-207ENST00000476742 PUM1Q14671 1186 aaKnown RBP eCLIP4.71□□□□□ -1.66
NPHP3-207ENST00000476742 TAF7LQ5H9L4 462 aa4.71□□□□□ -1.66
NPHP3-207ENST00000476742 ARHGAP36Q6ZRI8 547 aa4.71□□□□□ -1.66
NPHP3-207ENST00000476742 KCTD1Q719H9 257 aa4.71□□□□□ -1.66
NPHP3-207ENST00000476742 JAZF1Q86VZ6 243 aa4.71□□□□□ -1.66
NPHP3-207ENST00000476742 TTLL11Q8NHH1 800 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms