RNA–Protein interactions for RNA: ENST00000476581.6

XPC-205, Transcript of XPC complex subunit, DNA damage recognition and repair factor, humanhuman

TSL 1 (best)

Gene XPC, Length 2,944 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XPC-205ENST00000476581 TRPM7Q96QT4 1865 aa13.46□□□□□ -0.25
XPC-205ENST00000476581 SPDYE3A6NKU9 549 aa13.46□□□□□ -0.25
XPC-205ENST00000476581 EIF3CLB5ME19 914 aaKnown RBP13.46□□□□□ -0.25
XPC-205ENST00000476581 ZBED4O75132 1171 aa13.46□□□□□ -0.25
XPC-205ENST00000476581 PRR29P0C7W0 189 aa13.46□□□□□ -0.25
XPC-205ENST00000476581 FSTL1Q12841 308 aa13.46□□□□□ -0.25
XPC-205ENST00000476581 PRR16Q569H4 304 aa13.46□□□□□ -0.25
XPC-205ENST00000476581 ISM2Q6H9L7 571 aa13.46□□□□□ -0.25
XPC-205ENST00000476581 TRIM65Q6PJ69 517 aa13.46□□□□□ -0.25
XPC-205ENST00000476581 JMYQ8N9B5 988 aa13.46□□□□□ -0.25
XPC-205ENST00000476581 TAAR1Q96RJ0 339 aa13.46□□□□□ -0.25
XPC-205ENST00000476581 EIF3CQ99613 913 aaKnown RBP13.46□□□□□ -0.25
XPC-205ENST00000476581 PTPN18Q99952 460 aa13.46□□□□□ -0.25
XPC-205ENST00000476581 PAGR1Q9BTK6 254 aa13.46□□□□□ -0.25
XPC-205ENST00000476581 RNF146Q9NTX7 359 aa13.46□□□□□ -0.25
XPC-205ENST00000476581 SERTAD1Q9UHV2 236 aa13.46□□□□□ -0.25
XPC-205ENST00000476581 MRPL11Q9Y3B7 192 aaKnown RBP13.46□□□□□ -0.25
XPC-205ENST00000476581 OR52Z1P0C646 297 aa13.46□□□□□ -0.26
XPC-205ENST00000476581 SREBF1P36956 1147 aa13.46□□□□□ -0.26
XPC-205ENST00000476581 STAT3P40763 770 aa13.46□□□□□ -0.26
XPC-205ENST00000476581 HSD17B4P51659 736 aa13.46□□□□□ -0.26
XPC-205ENST00000476581 PNOCQ13519 176 aa13.46□□□□□ -0.26
XPC-205ENST00000476581 KARSQ15046 597 aaKnown RBP13.46□□□□□ -0.26
XPC-205ENST00000476581 ZRSR1Q15695 479 aaKnown RBP13.46□□□□□ -0.26
XPC-205ENST00000476581 NSMFQ6X4W1 530 aa13.46□□□□□ -0.26
XPC-205ENST00000476581 ANO10Q9NW15 660 aa13.46□□□□□ -0.26
XPC-205ENST00000476581 ABCB11O95342 1321 aa13.46□□□□□ -0.26
XPC-205ENST00000476581 FAM237AA0A1B0GTK4 181 aa13.45□□□□□ -0.26
XPC-205ENST00000476581 ECM2O94769 699 aaPredicted RBP13.45□□□□□ -0.26
XPC-205ENST00000476581 SFPQP23246 707 aaKnown RBP eCLIP13.45□□□□□ -0.26
XPC-205ENST00000476581 CALCRLQ16602 461 aa13.45□□□□□ -0.26
XPC-205ENST00000476581 CHADLQ6NUI6 762 aa13.45□□□□□ -0.26
XPC-205ENST00000476581 SYTL5Q8TDW5 730 aaPredicted RBP13.45□□□□□ -0.26
XPC-205ENST00000476581 BRI3BPQ8WY22 251 aa13.45□□□□□ -0.26
XPC-205ENST00000476581 DHX58Q96C10 678 aa13.45□□□□□ -0.26
XPC-205ENST00000476581 ASTN1O14525 1302 aa13.45□□□□□ -0.26
XPC-205ENST00000476581 H3BQF6 201 aa13.45□□□□□ -0.26
XPC-205ENST00000476581 CXCL11O14625 94 aa13.45□□□□□ -0.26
XPC-205ENST00000476581 MYCNP04198 464 aaPredicted RBP13.45□□□□□ -0.26
XPC-205ENST00000476581 CORO7P57737 925 aa13.45□□□□□ -0.26
XPC-205ENST00000476581 BAATQ14032 418 aaPredicted RBP13.45□□□□□ -0.26
XPC-205ENST00000476581 ECM1Q16610 540 aa13.45□□□□□ -0.26
XPC-205ENST00000476581 MTRQ99707 1265 aa13.45□□□□□ -0.26
XPC-205ENST00000476581 MMTAG2Q9BU76 263 aaKnown RBP13.45□□□□□ -0.26
XPC-205ENST00000476581 AGTPBP1Q9UPW5 1226 aa13.45□□□□□ -0.26
XPC-205ENST00000476581 CEP83Q9Y592 693 aa13.45□□□□□ -0.26
XPC-205ENST00000476581 MAP2K7O14733 419 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 KIF3CO14782 793 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 ACTN4O43707 911 aaKnown RBP13.44□□□□□ -0.26
XPC-205ENST00000476581 URI1O94763 535 aaPredicted RBP13.44□□□□□ -0.26
XPC-205ENST00000476581 CPP00450 1065 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 CCDC172P0C7W6 258 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 HOXA7P31268 230 aaPredicted RBP13.44□□□□□ -0.26
XPC-205ENST00000476581 GSCP56915 257 aaPredicted RBP13.44□□□□□ -0.26
XPC-205ENST00000476581 HERVK_113P62684 666 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 LBX2Q6XYB7 198 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 DTHD1Q6ZMT9 781 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 CCDC91Q7Z6B0 441 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 RBPJLQ9UBG7 517 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 IGLV3-22A0A075B6J6 115 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 BIN1O00499 593 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 KINO60870 393 aaKnown RBP13.44□□□□□ -0.26
XPC-205ENST00000476581 SMC2O95347 1197 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 EIF2AK2P19525 551 aaKnown RBP13.44□□□□□ -0.26
XPC-205ENST00000476581 AP3B2Q13367 1082 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 CT47A1Q5JQC4 288 aaPredicted RBP13.44□□□□□ -0.26
XPC-205ENST00000476581 PPP4R3AQ6IN85 833 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 CEP57L1Q8IYX8 460 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 GPATCH11Q8N954 259 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 ZNF579Q8NAF0 562 aaKnown RBP13.44□□□□□ -0.26
XPC-205ENST00000476581 PROCA1Q8NCQ7 364 aaPredicted RBP13.44□□□□□ -0.26
XPC-205ENST00000476581 FERMT2Q96AC1 680 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 DOCK5Q9H7D0 1870 aa13.44□□□□□ -0.26
XPC-205ENST00000476581 BTBD19C9JJ37 291 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 HUNKP57058 714 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 MRPS9P82933 396 aaKnown RBP13.43□□□□□ -0.26
XPC-205ENST00000476581 RSRC2Q7L4I2 434 aaKnown RBP13.43□□□□□ -0.26
XPC-205ENST00000476581 C2orf69Q8N8R5 385 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 ETNPPLQ8TBG4 499 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 ZIC5Q96T25 663 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 A1CFQ9NQ94 594 aaKnown RBP13.43□□□□□ -0.26
XPC-205ENST00000476581 HOXC10Q9NYD6 342 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 CTDP1Q9Y5B0 961 aaPredicted RBP13.43□□□□□ -0.26
XPC-205ENST00000476581 ARP10275 920 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 ITGB5P18084 799 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 MDM2Q00987 491 aaPredicted RBP13.43□□□□□ -0.26
XPC-205ENST00000476581 CNTN2Q02246 1040 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 E2F4Q16254 413 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 NAALADL2Q58DX5 795 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 ARL6IP4Q66PJ3 421 aaKnown RBP13.43□□□□□ -0.26
XPC-205ENST00000476581 AOPEPQ8N6M6 819 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 SDF4Q9BRK5 362 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 NAT10Q9H0A0 1025 aaKnown RBP13.43□□□□□ -0.26
XPC-205ENST00000476581 EPC1Q9H2F5 836 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 BCAS3Q9H6U6 928 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 PKD2L1Q9P0L9 805 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 FANCGO15287 622 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 MSH4O15457 936 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 SNAPC2Q13487 334 aa13.43□□□□□ -0.26
XPC-205ENST00000476581 RNF207Q6ZRF8 634 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms