RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 GCFC2P16383 781 aaKnown RBP33.55■■■□□ 2.96
HOXB3-208ENST00000476342 CYP3A7P24462 503 aa33.55■■■□□ 2.96
HOXB3-208ENST00000476342 SDF4Q9BRK5 362 aa33.55■■■□□ 2.96
HOXB3-208ENST00000476342 SENP6Q9GZR1 1112 aaPredicted RBP33.55■■■□□ 2.96
HOXB3-208ENST00000476342 FAM205CA6NFA0 338 aa33.54■■■□□ 2.96
HOXB3-208ENST00000476342 NOP56O00567 594 aaKnown RBP33.54■■■□□ 2.96
HOXB3-208ENST00000476342 Q4G0T1 1027 aa33.54■■■□□ 2.96
HOXB3-208ENST00000476342 NOSTRINQ8IVI9 506 aa33.54■■■□□ 2.96
HOXB3-208ENST00000476342 GLT1D1Q96MS3 346 aa33.54■■■□□ 2.96
HOXB3-208ENST00000476342 NFASCO94856 1347 aa33.54■■■□□ 2.96
HOXB3-208ENST00000476342 A0A1W2PQ45 241 aaPredicted RBP33.53■■■□□ 2.96
HOXB3-208ENST00000476342 A0A1W2PQY0 241 aa33.53■■■□□ 2.96
HOXB3-208ENST00000476342 KPNA6O60684 536 aa33.53■■■□□ 2.96
HOXB3-208ENST00000476342 CABYRO75952 493 aa33.53■■■□□ 2.96
HOXB3-208ENST00000476342 TDP2O95551 362 aa33.53■■■□□ 2.96
HOXB3-208ENST00000476342 DGKDQ16760 1214 aa33.53■■■□□ 2.96
HOXB3-208ENST00000476342 PPP4R3AQ6IN85 833 aa33.53■■■□□ 2.96
HOXB3-208ENST00000476342 FERMT2Q96AC1 680 aa33.53■■■□□ 2.96
HOXB3-208ENST00000476342 LENG9Q96B70 501 aa33.53■■■□□ 2.96
HOXB3-208ENST00000476342 ZNF577Q9BSK1 485 aa33.53■■■□□ 2.96
HOXB3-208ENST00000476342 CCNT1O60563 726 aaKnown RBP33.53■■■□□ 2.96
HOXB3-208ENST00000476342 U2AF2P26368 475 aaKnown RBP eCLIP33.53■■■□□ 2.962e-6■□□□□ 10.7
HOXB3-208ENST00000476342 HSDL1Q3SXM5 330 aa33.53■■■□□ 2.96
HOXB3-208ENST00000476342 MCTP1Q6DN14 999 aa33.53■■■□□ 2.96
HOXB3-208ENST00000476342 MBOAT7Q96N66 472 aa33.53■■■□□ 2.96
HOXB3-208ENST00000476342 DDX25Q9UHL0 483 aaKnown RBP33.53■■■□□ 2.96
HOXB3-208ENST00000476342 IPO5O00410 1097 aaKnown RBP33.52■■■□□ 2.96
HOXB3-208ENST00000476342 MYL3P08590 195 aa33.52■■■□□ 2.96
HOXB3-208ENST00000476342 BECN1Q14457 450 aa33.52■■■□□ 2.96
HOXB3-208ENST00000476342 BCAS3Q9H6U6 928 aa33.52■■■□□ 2.96
HOXB3-208ENST00000476342 JPH1Q9HDC5 661 aaPredicted RBP33.52■■■□□ 2.96
HOXB3-208ENST00000476342 STARD7Q9NQZ5 370 aa33.52■■■□□ 2.96
HOXB3-208ENST00000476342 CXCL17Q6UXB2 119 aa33.51■■■□□ 2.95
HOXB3-208ENST00000476342 HTATIP2Q9BUP3 242 aa33.51■■■□□ 2.95
HOXB3-208ENST00000476342 TBC1D22BQ9NU19 505 aa33.51■■■□□ 2.95
HOXB3-208ENST00000476342 ELP1O95163 1332 aa33.5■■■□□ 2.95
HOXB3-208ENST00000476342 KIF28PB7ZC32 967 aa33.5■■■□□ 2.95
HOXB3-208ENST00000476342 PURAQ00577 322 aaKnown RBP33.5■■■□□ 2.95
HOXB3-208ENST00000476342 SP4Q02446 784 aa33.5■■■□□ 2.95
HOXB3-208ENST00000476342 ITGB3BPQ13352 177 aaPredicted RBP33.5■■■□□ 2.95
HOXB3-208ENST00000476342 VTI1AQ96AJ9 217 aa33.5■■■□□ 2.95
HOXB3-208ENST00000476342 SLC9A2Q9UBY0 812 aa33.5■■■□□ 2.95
HOXB3-208ENST00000476342 PPFIA4O75335 1185 aa33.49■■■□□ 2.95
HOXB3-208ENST00000476342 MTG1Q9BT17 334 aaPredicted RBP33.49■■■□□ 2.95
HOXB3-208ENST00000476342 TCEAL9Q9UHQ7 104 aa33.49■■■□□ 2.95
HOXB3-208ENST00000476342 NOL7Q9UMY1 257 aaKnown RBP33.49■■■□□ 2.95
HOXB3-208ENST00000476342 MSH4O15457 936 aa33.48■■■□□ 2.95
HOXB3-208ENST00000476342 HOXD8P13378 290 aaPredicted RBP33.48■■■□□ 2.95
HOXB3-208ENST00000476342 GPR20Q99678 358 aa33.48■■■□□ 2.95
HOXB3-208ENST00000476342 VPS37CA5D8V6 355 aaPredicted RBP33.47■■■□□ 2.95
HOXB3-208ENST00000476342 SLC37A4O43826 429 aa33.47■■■□□ 2.95
HOXB3-208ENST00000476342 SYT1P21579 422 aa33.46■■■□□ 2.95
HOXB3-208ENST00000476342 TRAPPC10P48553 1259 aa33.46■■■□□ 2.95
HOXB3-208ENST00000476342 A0A0U1RQG5 324 aaPredicted RBP33.45■■■□□ 2.95
HOXB3-208ENST00000476342 ATN1P54259 1190 aaPredicted RBP33.45■■■□□ 2.95
HOXB3-208ENST00000476342 SLC39A5Q6ZMH5 540 aa33.45■■■□□ 2.95
HOXB3-208ENST00000476342 SEPT1Q8WYJ6 367 aa33.45■■■□□ 2.95
HOXB3-208ENST00000476342 RIT2Q99578 217 aa33.45■■■□□ 2.95
HOXB3-208ENST00000476342 DDX39AO00148 427 aaKnown RBP33.45■■■□□ 2.94
HOXB3-208ENST00000476342 DHX15O43143 795 aaKnown RBP33.45■■■□□ 2.94
HOXB3-208ENST00000476342 ATP2B1P20020 1258 aa33.45■■■□□ 2.94
HOXB3-208ENST00000476342 ETNPPLQ8TBG4 499 aa33.45■■■□□ 2.94
HOXB3-208ENST00000476342 SLC5A5Q92911 643 aa33.45■■■□□ 2.94
HOXB3-208ENST00000476342 UIMC1Q96RL1 719 aa33.45■■■□□ 2.94
HOXB3-208ENST00000476342 KATNAL1Q9BW62 490 aa33.45■■■□□ 2.94
HOXB3-208ENST00000476342 DNAH12Q6ZR08 3092 aa33.44■■■□□ 2.94
HOXB3-208ENST00000476342 SCN10AQ9Y5Y9 1956 aa33.44■■■□□ 2.94
HOXB3-208ENST00000476342 TBX3O15119 743 aa33.44■■■□□ 2.94
HOXB3-208ENST00000476342 GAS7O60861 476 aa33.44■■■□□ 2.94
HOXB3-208ENST00000476342 KRT76Q01546 638 aa33.44■■■□□ 2.94
HOXB3-208ENST00000476342 C1orf53Q5VUE5 145 aa33.44■■■□□ 2.94
HOXB3-208ENST00000476342 LRCH2Q5VUJ6 765 aa33.44■■■□□ 2.94
HOXB3-208ENST00000476342 TEKT3Q9BXF9 490 aa33.44■■■□□ 2.94
HOXB3-208ENST00000476342 SEZ6LQ9BYH1 1024 aa33.44■■■□□ 2.94
HOXB3-208ENST00000476342 PDIA4P13667 645 aaKnown RBP33.43■■■□□ 2.94
HOXB3-208ENST00000476342 TCF7P36402 384 aaPredicted RBP33.43■■■□□ 2.94
HOXB3-208ENST00000476342 ORC2Q13416 577 aaPredicted RBP33.43■■■□□ 2.94
HOXB3-208ENST00000476342 POTEDQ86YR6 584 aa33.43■■■□□ 2.94
HOXB3-208ENST00000476342 SPRYD3Q8NCJ5 442 aa33.43■■■□□ 2.94
HOXB3-208ENST00000476342 FAM20AQ96MK3 541 aa33.43■■■□□ 2.94
HOXB3-208ENST00000476342 KCNMB3Q9NPA1 279 aa33.43■■■□□ 2.94
HOXB3-208ENST00000476342 MARCH6O60337 910 aa33.42■■■□□ 2.94
HOXB3-208ENST00000476342 NEMFO60524 1076 aa33.42■■■□□ 2.94
HOXB3-208ENST00000476342 LGALS2P05162 132 aa33.42■■■□□ 2.94
HOXB3-208ENST00000476342 ZNF286BP0CG31 522 aa33.42■■■□□ 2.94
HOXB3-208ENST00000476342 ACTR2P61160 394 aa33.42■■■□□ 2.94
HOXB3-208ENST00000476342 MLLT1Q03111 559 aaPredicted RBP33.42■■■□□ 2.94
HOXB3-208ENST00000476342 SNX17Q15036 470 aa33.42■■■□□ 2.94
HOXB3-208ENST00000476342 TTC38Q5R3I4 469 aa33.42■■■□□ 2.94
HOXB3-208ENST00000476342 ZNF746Q6NUN9 644 aaPredicted RBP33.42■■■□□ 2.94
HOXB3-208ENST00000476342 TELO2Q9Y4R8 837 aa33.42■■■□□ 2.94
HOXB3-208ENST00000476342 ALPK3Q96L96 1907 aa33.41■■■□□ 2.94
HOXB3-208ENST00000476342 STX6O43752 255 aa33.41■■■□□ 2.94
HOXB3-208ENST00000476342 BAG4O95429 457 aaKnown RBP33.41■■■□□ 2.94
HOXB3-208ENST00000476342 F2P00734 622 aa33.41■■■□□ 2.94
HOXB3-208ENST00000476342 ITGA7Q13683 1181 aa33.41■■■□□ 2.94
HOXB3-208ENST00000476342 LRRC26Q2I0M4 334 aa33.41■■■□□ 2.94
HOXB3-208ENST00000476342 SLFN12Q8IYM2 578 aa33.41■■■□□ 2.94
HOXB3-208ENST00000476342 GSTTP1A0A1W2PQM5 241 aa33.4■■■□□ 2.94
HOXB3-208ENST00000476342 MCM7P33993 719 aa33.4■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms