RNA–Protein interactions for RNA: ENST00000476178.1

SATB1-213, Transcript of SATB homeobox 1, humanhuman

TSL 3

Gene SATB1, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-213ENST00000476178 EFCAB14O75071 495 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 STAM2O75886 525 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 LGALS2P05162 132 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 RSPH10BP0C881 870 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 SMIM10L2AP0DMW4 78 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 SMIM10L2BP0DMW5 78 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 CALM1P0DP23 149 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 CALM2P0DP24 149 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 CALM3P0DP25 149 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 HOXD8P13378 290 aaPredicted RBP9.7□□□□□ -0.86
SATB1-213ENST00000476178 DEFB103AP81534 67 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 MRPS9P82933 396 aaKnown RBP9.7□□□□□ -0.86
SATB1-213ENST00000476178 RBL2Q08999 1139 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 GPNMBQ14956 572 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 UTP14CQ5TAP6 766 aaKnown RBP9.7□□□□□ -0.86
SATB1-213ENST00000476178 KRT40Q6A162 431 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 USP17L6PQ6QN14 398 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 DHX32Q7L7V1 743 aaKnown RBP9.7□□□□□ -0.86
SATB1-213ENST00000476178 NLRX1Q86UT6 975 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 RAB11FIP4Q86YS3 637 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 RAD9AQ99638 391 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 C16orf70Q9BSU1 422 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 USP26Q9BXU7 913 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 BCAS3Q9H6U6 928 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 MTUS1Q9ULD2 1270 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 BRPF3Q9ULD4 1205 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 SLC12A7Q9Y666 1083 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 MTCH2Q9Y6C9 303 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 FRMPD4Q14CM0 1322 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 MYH7BA7E2Y1 1941 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 KIAA1217Q5T5P2 1943 aa9.7□□□□□ -0.86
SATB1-213ENST00000476178 hCG_1642624A0A1W2PR95 340 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 LCHNA4D1U4 455 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 EPOPA6NHQ4 379 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 PIK3CDO00329 1044 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 FIBPO43427 364 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 LGR5O75473 907 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 ARHGEF15O94989 841 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 CXCL10P02778 98 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 AMHP03971 560 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 GNAT1P11488 350 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 TFF2Q03403 129 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 GRB10Q13322 594 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 TRIM71Q2Q1W2 868 aaKnown RBP9.69□□□□□ -0.86
SATB1-213ENST00000476178 XRRA1Q6P2D8 792 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 METTL7BQ6UX53 244 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 SYNE3Q6ZMZ3 975 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 TMTC3Q6ZXV5 915 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 EMSYQ7Z589 1322 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 SERINC5Q86VE9 423 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 CCDC82Q8N4S0 544 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 TET1Q8NFU7 2136 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 GBF1Q92538 1859 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 WNT8BQ93098 351 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 TCEANC2Q96MN5 208 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 INPP4AQ96PE3 977 aaPredicted RBP9.69□□□□□ -0.86
SATB1-213ENST00000476178 UHRF1Q96T88 793 aaPredicted RBP9.69□□□□□ -0.86
SATB1-213ENST00000476178 RNPEPQ9H4A4 650 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 PSTPIP2Q9H939 334 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 SETD4Q9NVD3 440 aa9.69□□□□□ -0.86
SATB1-213ENST00000476178 ZNF215Q9UL58 517 aaPredicted RBP9.69□□□□□ -0.86
SATB1-213ENST00000476178 PRRC2BQ5JSZ5 2229 aaKnown RBP9.68□□□□□ -0.86
SATB1-213ENST00000476178 TREHO43280 583 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 GJB5O95377 273 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 CTSHP09668 335 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 POU3F3P20264 500 aaPredicted RBP9.68□□□□□ -0.86
SATB1-213ENST00000476178 ICAM3P32942 547 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 HSPA4P34932 840 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 ARHGAP4P98171 946 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 FUT2Q10981 343 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 SEMA3FQ13275 785 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 HIC1Q14526 733 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 KRT32Q14532 448 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 TCTN1Q2MV58 587 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 PCNX4Q63HM2 1172 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 APOA5Q6Q788 366 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 MYOCDQ8IZQ8 938 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 GIMAP8Q8ND71 665 aaPredicted RBP9.68□□□□□ -0.86
SATB1-213ENST00000476178 DBF4BQ8NFT6 615 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 SEPT8Q92599 483 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 TGS1Q96RS0 853 aaKnown RBP9.68□□□□□ -0.86
SATB1-213ENST00000476178 GPR20Q99678 358 aa9.68□□□□□ -0.86
SATB1-213ENST00000476178 FAM217BQ9NTX9 383 aaPredicted RBP9.68□□□□□ -0.86
SATB1-213ENST00000476178 SPDYE3A6NKU9 549 aa9.67□□□□□ -0.86
SATB1-213ENST00000476178 RBAK-RBAKDNI3L0D1 243 aa9.67□□□□□ -0.86
SATB1-213ENST00000476178 UPP2O95045 317 aa9.67□□□□□ -0.86
SATB1-213ENST00000476178 CPA1P15085 419 aa9.67□□□□□ -0.86
SATB1-213ENST00000476178 KCNQ1P51787 676 aa9.67□□□□□ -0.86
SATB1-213ENST00000476178 MBTPS1Q14703 1052 aa9.67□□□□□ -0.86
SATB1-213ENST00000476178 TRAF7Q6Q0C0 670 aa9.67□□□□□ -0.86
SATB1-213ENST00000476178 LIN28BQ6ZN17 250 aaKnown RBP eCLIP9.67□□□□□ -0.86
SATB1-213ENST00000476178 HEATR3Q7Z4Q2 680 aa9.67□□□□□ -0.86
SATB1-213ENST00000476178 SPRED2Q7Z698 418 aa9.67□□□□□ -0.86
SATB1-213ENST00000476178 MICU3Q86XE3 530 aa9.67□□□□□ -0.86
SATB1-213ENST00000476178 TRIM50Q86XT4 487 aa9.67□□□□□ -0.86
SATB1-213ENST00000476178 GDPD5Q8WTR4 605 aa9.67□□□□□ -0.86
SATB1-213ENST00000476178 HLA-CQ95604 372 aa9.67□□□□□ -0.86
SATB1-213ENST00000476178 CDHR1Q96JP9 859 aa9.67□□□□□ -0.86
SATB1-213ENST00000476178 SENP7Q9BQF6 1050 aa9.67□□□□□ -0.86
SATB1-213ENST00000476178 PKD2L1Q9P0L9 805 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms