RNA–Protein interactions for RNA: ENST00000475763.5

LSG1-207, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 3

Gene LSG1, Length 590 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-207ENST00000475763 TMEM60Q9H2L4 133 aa12.68□□□□□ -0.38
LSG1-207ENST00000475763 ACAD9Q9H845 621 aa12.68□□□□□ -0.38
LSG1-207ENST00000475763 FBXO40Q9UH90 709 aa12.68□□□□□ -0.38
LSG1-207ENST00000475763 DDX25Q9UHL0 483 aaKnown RBP12.68□□□□□ -0.38
LSG1-207ENST00000475763 FRMPD4Q14CM0 1322 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 RPTORQ8N122 1335 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 VWA3AA6NCI4 1184 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 TBX3O15119 743 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 TDP2O95551 362 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 HUNKP57058 714 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 GUCA2AQ02747 115 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 Q4G0T1 1027 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 TPRNQ4KMQ1 711 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 MUM1L1Q5H9M0 696 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 RNF207Q6ZRF8 634 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 RBM43Q6ZSC3 357 aaKnown RBP12.67□□□□□ -0.38
LSG1-207ENST00000475763 ANKRD23Q86SG2 305 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 FCHSD1Q86WN1 690 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 RIOX2Q8IUF8 465 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 ELOA2Q8IYF1 753 aaPredicted RBP12.67□□□□□ -0.38
LSG1-207ENST00000475763 SMC1BQ8NDV3 1235 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 TBC1D5Q92609 795 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 RAB34Q9BZG1 259 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 USP25Q9UHP3 1055 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 KCNH3Q9ULD8 1083 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 MRVI1Q9Y6F6 885 aa12.67□□□□□ -0.38
LSG1-207ENST00000475763 CCL15-CCL14A0A0B4J2E2 113 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 HOXA2O43364 376 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 ZNF202O95125 648 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 SLC25A27O95847 323 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 CLCN1P35523 988 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 TXLNAP40222 546 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 RPS6P62753 249 aaKnown RBP12.66□□□□□ -0.38
LSG1-207ENST00000475763 GRIN1Q05586 938 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 PDIA5Q14554 519 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 IL17AQ16552 155 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 CCL15Q16663 113 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 TMEM266Q2M3C6 531 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 XRRA1Q6P2D8 792 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 SLFN12Q8IYM2 578 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 SYTL5Q8TDW5 730 aaPredicted RBP12.66□□□□□ -0.38
LSG1-207ENST00000475763 CCDC34Q96HJ3 373 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 FAM20AQ96MK3 541 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 REPIN1Q9BWE0 567 aaKnown RBP12.66□□□□□ -0.38
LSG1-207ENST00000475763 SPATC1LQ9H0A9 340 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 TNMDQ9H2S6 317 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 KCNMB3Q9NPA1 279 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 HOMER2Q9NSB8 354 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 RIPK3Q9Y572 518 aa12.66□□□□□ -0.38
LSG1-207ENST00000475763 SLC26A4O43511 780 aa12.65□□□□□ -0.38
LSG1-207ENST00000475763 SLC37A4O43826 429 aa12.65□□□□□ -0.38
LSG1-207ENST00000475763 ZNF76P36508 570 aa12.65□□□□□ -0.38
LSG1-207ENST00000475763 USP46P62068 366 aa12.65□□□□□ -0.38
LSG1-207ENST00000475763 SETQ01105 290 aaPredicted RBP12.65□□□□□ -0.38
LSG1-207ENST00000475763 KANK3Q6NY19 840 aa12.65□□□□□ -0.38
LSG1-207ENST00000475763 NIPA1Q7RTP0 329 aa12.65□□□□□ -0.38
LSG1-207ENST00000475763 IGSF22Q8N9C0 903 aa12.65□□□□□ -0.38
LSG1-207ENST00000475763 BRI3BPQ8WY22 251 aa12.65□□□□□ -0.38
LSG1-207ENST00000475763 SYMPKQ92797 1274 aaKnown RBP12.65□□□□□ -0.38
LSG1-207ENST00000475763 USB1Q9BQ65 265 aaKnown RBP12.65□□□□□ -0.38
LSG1-207ENST00000475763 CCSER1Q9C0I3 900 aa12.65□□□□□ -0.38
LSG1-207ENST00000475763 ZCCHC17Q9NP64 241 aaKnown RBP12.65□□□□□ -0.38
LSG1-207ENST00000475763 BTBD7Q9P203 1132 aa12.65□□□□□ -0.38
LSG1-207ENST00000475763 HOOK1Q9UJC3 728 aaKnown RBP12.65□□□□□ -0.38
LSG1-207ENST00000475763 PFASO15067 1338 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 MANSC4A6NHS7 340 aaPredicted RBP12.64□□□□□ -0.39
LSG1-207ENST00000475763 MARCH6O60337 910 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 UBA7P41226 1012 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 GCLCP48506 637 aaPredicted RBP12.64□□□□□ -0.39
LSG1-207ENST00000475763 MMP16P51512 607 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 PLS1Q14651 629 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 PCNX4Q63HM2 1172 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 RGMBQ6NW40 437 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 LRSAM1Q6UWE0 723 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 NSMFQ6X4W1 530 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 SLC30A10Q6XR72 485 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 SAPCD2Q86UD0 394 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 RASAL3Q86YV0 1011 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 SHCBP1Q8NEM2 672 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 LENG9Q96B70 501 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 HHIPL1Q96JK4 782 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 SDF4Q9BRK5 362 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 COL20A1Q9P218 1284 aa12.64□□□□□ -0.39
LSG1-207ENST00000475763 IGLV3-22A0A075B6J6 115 aa12.63□□□□□ -0.39
LSG1-207ENST00000475763 SYCE3A1L190 88 aa12.63□□□□□ -0.39
LSG1-207ENST00000475763 BTBD19C9JJ37 291 aa12.63□□□□□ -0.39
LSG1-207ENST00000475763 FAM86B1E9PN63 330 aa12.63□□□□□ -0.39
LSG1-207ENST00000475763 PDHXO00330 501 aa12.63□□□□□ -0.39
LSG1-207ENST00000475763 MEIS1O00470 390 aa12.63□□□□□ -0.39
LSG1-207ENST00000475763 POLR2DO15514 142 aaKnown RBP12.63□□□□□ -0.39
LSG1-207ENST00000475763 CNMDO75829 334 aa12.63□□□□□ -0.39
LSG1-207ENST00000475763 TOMM70O94826 608 aa12.63□□□□□ -0.39
LSG1-207ENST00000475763 FAM86B2P0C5J1 330 aa12.63□□□□□ -0.39
LSG1-207ENST00000475763 BCRP11274 1271 aa12.63□□□□□ -0.39
LSG1-207ENST00000475763 TXKP42681 527 aa12.63□□□□□ -0.39
LSG1-207ENST00000475763 ZNF157P51786 506 aaPredicted RBP12.63□□□□□ -0.39
LSG1-207ENST00000475763 INHBEP58166 350 aa12.63□□□□□ -0.39
LSG1-207ENST00000475763 BAATQ14032 418 aaPredicted RBP12.63□□□□□ -0.39
LSG1-207ENST00000475763 CEP55Q53EZ4 464 aa12.63□□□□□ -0.39
LSG1-207ENST00000475763 PRR16Q569H4 304 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms