RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-211ENST00000475728 TRIM29Q14134 588 aa16.45■□□□□ 0.22
ABCF3-211ENST00000475728 NBPF20Q3BBV1 942 aa16.45■□□□□ 0.22
ABCF3-211ENST00000475728 HSDL1Q3SXM5 330 aa16.45■□□□□ 0.22
ABCF3-211ENST00000475728 FAM126BQ8IXS8 530 aa16.45■□□□□ 0.22
ABCF3-211ENST00000475728 SDF4Q9BRK5 362 aa16.45■□□□□ 0.22
ABCF3-211ENST00000475728 KCNH7Q9NS40 1196 aa16.45■□□□□ 0.22
ABCF3-211ENST00000475728 ALPK3Q96L96 1907 aa16.45■□□□□ 0.22
ABCF3-211ENST00000475728 F2P00734 622 aa16.44■□□□□ 0.22
ABCF3-211ENST00000475728 KCNA2P16389 499 aa16.44■□□□□ 0.22
ABCF3-211ENST00000475728 USP11P51784 963 aa16.44■□□□□ 0.22
ABCF3-211ENST00000475728 HMGN5P82970 282 aaKnown RBP16.44■□□□□ 0.22
ABCF3-211ENST00000475728 FAAP100Q0VG06 881 aa16.44■□□□□ 0.22
ABCF3-211ENST00000475728 FAM47CQ5HY64 1035 aa16.44■□□□□ 0.22
ABCF3-211ENST00000475728 KRT25Q7Z3Z0 450 aa16.44■□□□□ 0.22
ABCF3-211ENST00000475728 PLA2G4DQ86XP0 818 aa16.44■□□□□ 0.22
ABCF3-211ENST00000475728 RASGRP4Q8TDF6 673 aa16.44■□□□□ 0.22
ABCF3-211ENST00000475728 CRYGNQ8WXF5 182 aa16.44■□□□□ 0.22
ABCF3-211ENST00000475728 AIFM3Q96NN9 605 aa16.44■□□□□ 0.22
ABCF3-211ENST00000475728 PHF20Q9BVI0 1012 aa16.44■□□□□ 0.22
ABCF3-211ENST00000475728 GRIN2DO15399 1336 aa16.44■□□□□ 0.22
ABCF3-211ENST00000475728 NFASCO94856 1347 aa16.44■□□□□ 0.22
ABCF3-211ENST00000475728 SOX1O00570 391 aaPredicted RBP16.43■□□□□ 0.22
ABCF3-211ENST00000475728 SORBS3O60504 671 aa16.43■□□□□ 0.22
ABCF3-211ENST00000475728 CD4P01730 458 aa16.43■□□□□ 0.22
ABCF3-211ENST00000475728 RAG1P15918 1043 aa16.43■□□□□ 0.22
ABCF3-211ENST00000475728 CIITAP33076 1130 aa16.43■□□□□ 0.22
ABCF3-211ENST00000475728 MAGEA10P43363 369 aaPredicted RBP16.43■□□□□ 0.22
ABCF3-211ENST00000475728 CCDC83Q8IWF9 413 aa16.43■□□□□ 0.22
ABCF3-211ENST00000475728 LRCH3Q96II8 777 aa16.43■□□□□ 0.22
ABCF3-211ENST00000475728 GPR20Q99678 358 aa16.43■□□□□ 0.22
ABCF3-211ENST00000475728 GDF15Q99988 308 aa16.43■□□□□ 0.22
ABCF3-211ENST00000475728 PRO3102Q9H379 93 aa16.43■□□□□ 0.22
ABCF3-211ENST00000475728 JPH1Q9HDC5 661 aaPredicted RBP16.43■□□□□ 0.22
ABCF3-211ENST00000475728 TCEAL9Q9UHQ7 104 aa16.43■□□□□ 0.22
ABCF3-211ENST00000475728 ZNF215Q9UL58 517 aaPredicted RBP16.43■□□□□ 0.22
ABCF3-211ENST00000475728 DNAH12Q6ZR08 3092 aa16.42■□□□□ 0.22
ABCF3-211ENST00000475728 CCDC194A0A1B0GVG4 234 aa16.42■□□□□ 0.22
ABCF3-211ENST00000475728 A0A1W2PPC1 479 aa16.42■□□□□ 0.22
ABCF3-211ENST00000475728 ATP9AO75110 1047 aa16.42■□□□□ 0.22
ABCF3-211ENST00000475728 FDPSP14324 419 aaKnown RBP16.42■□□□□ 0.22
ABCF3-211ENST00000475728 BMP8BP34820 402 aa16.42■□□□□ 0.22
ABCF3-211ENST00000475728 PSEN2P49810 448 aa16.42■□□□□ 0.22
ABCF3-211ENST00000475728 CHMP4BP1P59074 171 aa16.42■□□□□ 0.22
ABCF3-211ENST00000475728 MFSD10Q14728 455 aa16.42■□□□□ 0.22
ABCF3-211ENST00000475728 NONOQ15233 471 aaKnown RBP eCLIP16.42■□□□□ 0.22
ABCF3-211ENST00000475728 SESTD1Q86VW0 696 aa16.42■□□□□ 0.22
ABCF3-211ENST00000475728 C7orf31Q8N865 590 aa16.42■□□□□ 0.22
ABCF3-211ENST00000475728 SEPT1Q8WYJ6 367 aa16.42■□□□□ 0.22
ABCF3-211ENST00000475728 KAT2BQ92831 832 aa16.42■□□□□ 0.22
ABCF3-211ENST00000475728 AGO4Q9HCK5 861 aaKnown RBP16.42■□□□□ 0.22
ABCF3-211ENST00000475728 TBX21Q9UL17 535 aa16.42■□□□□ 0.22
ABCF3-211ENST00000475728 KCNJ14Q9UNX9 436 aa16.42■□□□□ 0.22
ABCF3-211ENST00000475728 NOD1Q9Y239 953 aa16.42■□□□□ 0.22
ABCF3-211ENST00000475728 KIF3AQ9Y496 699 aa16.42■□□□□ 0.22
ABCF3-211ENST00000475728 TRIM43BA6NCK2 446 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 FAM86B1E9PN63 330 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 H3BRB1 525 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 M0R2N6 131 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 ADAMTS3O15072 1205 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 B4GALT4O60513 344 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 JAK2O60674 1132 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 LGALS2P05162 132 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 FAM86B2P0C5J1 330 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 ZNF286BP0CG31 522 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 ARP10275 920 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 KRT2P35908 639 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 SP4Q02446 784 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 NPY5RQ15761 445 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 KIAA0753Q2KHM9 967 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 SH3RF1Q7Z6J0 888 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 CYP2W1Q8TAV3 490 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 TBCKQ8TEA7 893 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 TRIM43Q96BQ3 446 aaPredicted RBP16.41■□□□□ 0.22
ABCF3-211ENST00000475728 NAP1L4Q99733 375 aaKnown RBP16.41■□□□□ 0.22
ABCF3-211ENST00000475728 UBE2OQ9C0C9 1292 aaKnown RBP16.41■□□□□ 0.22
ABCF3-211ENST00000475728 TUT1Q9H6E5 874 aaKnown RBP16.41■□□□□ 0.22
ABCF3-211ENST00000475728 TBC1D22BQ9NU19 505 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 PKD2L1Q9P0L9 805 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 SLC9A2Q9UBY0 812 aa16.41■□□□□ 0.22
ABCF3-211ENST00000475728 IGLV3-22A0A075B6J6 115 aa16.4■□□□□ 0.22
ABCF3-211ENST00000475728 HAS3O00219 553 aa16.4■□□□□ 0.22
ABCF3-211ENST00000475728 IPO5O00410 1097 aaKnown RBP16.4■□□□□ 0.22
ABCF3-211ENST00000475728 TIMP1P01033 207 aa16.4■□□□□ 0.22
ABCF3-211ENST00000475728 TCF7P36402 384 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-211ENST00000475728 MDM2Q00987 491 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-211ENST00000475728 SAFBQ15424 915 aaKnown RBP eCLIP16.4■□□□□ 0.22
ABCF3-211ENST00000475728 PRR16Q569H4 304 aa16.4■□□□□ 0.22
ABCF3-211ENST00000475728 MOXD1Q6UVY6 613 aa16.4■□□□□ 0.22
ABCF3-211ENST00000475728 FAM184AQ8NB25 1140 aa16.4■□□□□ 0.22
ABCF3-211ENST00000475728 TNPO1Q92973 898 aaKnown RBP16.4■□□□□ 0.22
ABCF3-211ENST00000475728 ZNF577Q9BSK1 485 aa16.4■□□□□ 0.22
ABCF3-211ENST00000475728 C16orf70Q9BSU1 422 aa16.4■□□□□ 0.22
ABCF3-211ENST00000475728 TRPV6Q9H1D0 765 aa16.4■□□□□ 0.22
ABCF3-211ENST00000475728 BCAS3Q9H6U6 928 aa16.4■□□□□ 0.22
ABCF3-211ENST00000475728 SCN10AQ9Y5Y9 1956 aa16.39■□□□□ 0.21
ABCF3-211ENST00000475728 GNAT1P11488 350 aa16.39■□□□□ 0.21
ABCF3-211ENST00000475728 GCFC2P16383 781 aaKnown RBP16.39■□□□□ 0.21
ABCF3-211ENST00000475728 ST3GAL1Q11201 340 aa16.39■□□□□ 0.21
ABCF3-211ENST00000475728 UTP14CQ5TAP6 766 aaKnown RBP16.39■□□□□ 0.21
ABCF3-211ENST00000475728 TMEM199Q8N511 208 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms