RNA–Protein interactions for RNA: ENST00000475580.5

VPS8-222, Transcript of VPS8, CORVET complex subunit, human

TSL 2

Gene VPS8, Length 318 nt, Biotype processed transcript.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VPS8-222	ENST00000475580	CHMP4BP1	P59074	171 aa		18.93	■□□□□ 0.62
VPS8-222	ENST00000475580	PPIG	Q13427	754 aa	Known RBP eCLIP	18.93	■□□□□ 0.62
VPS8-222	ENST00000475580	MTMR1	Q13613	665 aa		18.93	■□□□□ 0.62
VPS8-222	ENST00000475580	KIAA0753	Q2KHM9	967 aa		18.93	■□□□□ 0.62
VPS8-222	ENST00000475580	CCDC12	Q8WUD4	166 aa	Predicted RBP	18.93	■□□□□ 0.62
VPS8-222	ENST00000475580	VWCE	Q96DN2	955 aa		18.93	■□□□□ 0.62
VPS8-222	ENST00000475580	MXRA8	Q9BRK3	442 aa		18.93	■□□□□ 0.62
VPS8-222	ENST00000475580	ALG1	Q9BT22	464 aa		18.93	■□□□□ 0.62
VPS8-222	ENST00000475580	KATNAL1	Q9BW62	490 aa		18.93	■□□□□ 0.62
VPS8-222	ENST00000475580	HDAC6	Q9UBN7	1215 aa		18.93	■□□□□ 0.62
VPS8-222	ENST00000475580	GTF2IRD1	Q9UHL9	959 aa		18.93	■□□□□ 0.62
VPS8-222	ENST00000475580	PFKFB2	O60825	505 aa		18.92	■□□□□ 0.62
VPS8-222	ENST00000475580	CCL23	P55773	120 aa		18.92	■□□□□ 0.62
VPS8-222	ENST00000475580	SSRP1	Q08945	709 aa	Known RBP	18.92	■□□□□ 0.62
VPS8-222	ENST00000475580	HIC1	Q14526	733 aa		18.92	■□□□□ 0.62
VPS8-222	ENST00000475580	TMEM199	Q8N511	208 aa		18.92	■□□□□ 0.62
VPS8-222	ENST00000475580	CDHR1	Q96JP9	859 aa		18.92	■□□□□ 0.62
VPS8-222	ENST00000475580	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	18.92	■□□□□ 0.62
VPS8-222	ENST00000475580	C6orf50	Q9HD87	102 aa		18.92	■□□□□ 0.62
VPS8-222	ENST00000475580	SZT2	Q5T011	3432 aa		18.92	■□□□□ 0.62
VPS8-222	ENST00000475580	TANC1	Q9C0D5	1861 aa		18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	NOP56	O00567	594 aa	Known RBP	18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	CPLX1	O14810	134 aa		18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	MAFG	O15525	162 aa		18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	DEXI	O95424	95 aa		18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	AR	P10275	920 aa		18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	ARHGAP4	P98171	946 aa		18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	PTGIS	Q16647	500 aa		18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	CEP55	Q53EZ4	464 aa		18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	TMEM240	Q5SV17	173 aa		18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	TRIM22	Q8IYM9	498 aa		18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	REXO1	Q8N1G1	1221 aa	Known RBP	18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	GIMAP8	Q8ND71	665 aa	Predicted RBP	18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	CCDC148	Q8NFR7	591 aa		18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	RASGRP4	Q8TDF6	673 aa		18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	DHX38	Q92620	1227 aa	Known RBP	18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	SH3GLB2	Q9NR46	395 aa		18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	KCNH7	Q9NS40	1196 aa		18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	PKD2L1	Q9P0L9	805 aa		18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	SCN5A	Q14524	2016 aa		18.91	■□□□□ 0.62
VPS8-222	ENST00000475580	TRIP12	Q14669	1992 aa	Predicted RBP	18.9	■□□□□ 0.62
VPS8-222	ENST00000475580		H3BRB1	525 aa		18.9	■□□□□ 0.62
VPS8-222	ENST00000475580	MEIS1	O00470	390 aa		18.9	■□□□□ 0.62
VPS8-222	ENST00000475580	LARGE1	O95461	756 aa		18.9	■□□□□ 0.62
VPS8-222	ENST00000475580	CYP3A4	P08684	503 aa		18.9	■□□□□ 0.62
VPS8-222	ENST00000475580	ACR	P10323	421 aa		18.9	■□□□□ 0.62
VPS8-222	ENST00000475580	GNA11	P29992	359 aa		18.9	■□□□□ 0.62
VPS8-222	ENST00000475580	SP4	Q02446	784 aa		18.9	■□□□□ 0.62
VPS8-222	ENST00000475580	ANKRD1	Q15327	319 aa		18.9	■□□□□ 0.62
VPS8-222	ENST00000475580	TRIM50	Q86XT4	487 aa		18.9	■□□□□ 0.62
VPS8-222	ENST00000475580	C7orf31	Q8N865	590 aa		18.9	■□□□□ 0.62
VPS8-222	ENST00000475580	SCLY	Q96I15	445 aa		18.9	■□□□□ 0.62
VPS8-222	ENST00000475580	AIFM3	Q96NN9	605 aa		18.9	■□□□□ 0.62
VPS8-222	ENST00000475580	SLK	Q9H2G2	1235 aa	Predicted RBP	18.9	■□□□□ 0.62
VPS8-222	ENST00000475580	TUT1	Q9H6E5	874 aa	Known RBP	18.9	■□□□□ 0.62
VPS8-222	ENST00000475580	IL23A	Q9NPF7	189 aa		18.9	■□□□□ 0.62
VPS8-222	ENST00000475580	GSTTP1	A0A1W2PQM5	241 aa		18.89	■□□□□ 0.61
VPS8-222	ENST00000475580	FAM86B1	E9PN63	330 aa		18.89	■□□□□ 0.61
VPS8-222	ENST00000475580	EDIL3	O43854	480 aa		18.89	■□□□□ 0.61
VPS8-222	ENST00000475580	DTNB	O60941	627 aa		18.89	■□□□□ 0.61
VPS8-222	ENST00000475580	CTDNEP1	O95476	244 aa		18.89	■□□□□ 0.61
VPS8-222	ENST00000475580	FAM86B2	P0C5J1	330 aa		18.89	■□□□□ 0.61
VPS8-222	ENST00000475580	HOXC8	P31273	242 aa		18.89	■□□□□ 0.61
VPS8-222	ENST00000475580	ZNF200	P98182	395 aa	Predicted RBP	18.89	■□□□□ 0.61
VPS8-222	ENST00000475580	ITGB3BP	Q13352	177 aa	Predicted RBP	18.89	■□□□□ 0.61
VPS8-222	ENST00000475580	NPY5R	Q15761	445 aa		18.89	■□□□□ 0.61
VPS8-222	ENST00000475580	RASIP1	Q5U651	963 aa		18.89	■□□□□ 0.61
VPS8-222	ENST00000475580	RNPC3	Q96LT9	517 aa	Known RBP	18.89	■□□□□ 0.61
VPS8-222	ENST00000475580	IGLV3-22	A0A075B6J6	115 aa		18.88	■□□□□ 0.61
VPS8-222	ENST00000475580	PITPNM1	O00562	1244 aa		18.88	■□□□□ 0.61
VPS8-222	ENST00000475580	NEK4	P51957	841 aa		18.88	■□□□□ 0.61
VPS8-222	ENST00000475580	ME3	Q16798	604 aa		18.88	■□□□□ 0.61
VPS8-222	ENST00000475580	MCTP2	Q6DN12	878 aa		18.88	■□□□□ 0.61
VPS8-222	ENST00000475580	GPR153	Q6NV75	609 aa		18.88	■□□□□ 0.61
VPS8-222	ENST00000475580	CPLX2	Q6PUV4	134 aa	Known RBP	18.88	■□□□□ 0.61
VPS8-222	ENST00000475580	ZNF365	Q70YC5	407 aa		18.88	■□□□□ 0.61
VPS8-222	ENST00000475580	NIPA1	Q7RTP0	329 aa		18.88	■□□□□ 0.61
VPS8-222	ENST00000475580	BICD2	Q8TD16	824 aa		18.88	■□□□□ 0.61
VPS8-222	ENST00000475580	WNT8B	Q93098	351 aa		18.88	■□□□□ 0.61
VPS8-222	ENST00000475580	AGO4	Q9HCK5	861 aa	Known RBP	18.88	■□□□□ 0.61
VPS8-222	ENST00000475580	NOD1	Q9Y239	953 aa		18.88	■□□□□ 0.61
VPS8-222	ENST00000475580	STK36	Q9NRP7	1315 aa		18.88	■□□□□ 0.61
VPS8-222	ENST00000475580		M0R2N6	131 aa		18.87	■□□□□ 0.61
VPS8-222	ENST00000475580	NFASC	O94856	1347 aa		18.87	■□□□□ 0.61
VPS8-222	ENST00000475580	SMIM10L2A	P0DMW4	78 aa		18.87	■□□□□ 0.61
VPS8-222	ENST00000475580	SMIM10L2B	P0DMW5	78 aa		18.87	■□□□□ 0.61
VPS8-222	ENST00000475580	TCF7	P36402	384 aa	Predicted RBP	18.87	■□□□□ 0.61
VPS8-222	ENST00000475580	NLRP5	P59047	1200 aa		18.87	■□□□□ 0.61
VPS8-222	ENST00000475580	RBL2	Q08999	1139 aa		18.87	■□□□□ 0.61
VPS8-222	ENST00000475580	TRIM71	Q2Q1W2	868 aa	Known RBP	18.87	■□□□□ 0.61
VPS8-222	ENST00000475580	UTP14C	Q5TAP6	766 aa	Known RBP	18.87	■□□□□ 0.61
VPS8-222	ENST00000475580	PSRC1	Q6PGN9	363 aa	Predicted RBP	18.87	■□□□□ 0.61
VPS8-222	ENST00000475580	KIF2C	Q99661	725 aa		18.87	■□□□□ 0.61
VPS8-222	ENST00000475580	JPH1	Q9HDC5	661 aa	Predicted RBP	18.87	■□□□□ 0.61
VPS8-222	ENST00000475580	CDKL5	O76039	1030 aa		18.86	■□□□□ 0.61
VPS8-222	ENST00000475580	IQCF3	P0C7M6	154 aa		18.86	■□□□□ 0.61
VPS8-222	ENST00000475580	ZNF76	P36508	570 aa		18.86	■□□□□ 0.61
VPS8-222	ENST00000475580	ST3GAL1	Q11201	340 aa		18.86	■□□□□ 0.61
VPS8-222	ENST00000475580	PLA2G4D	Q86XP0	818 aa		18.86	■□□□□ 0.61
VPS8-222	ENST00000475580	NECAB1	Q8N987	351 aa		18.86	■□□□□ 0.61

Retrieved 100 of 20,778 RNA–protein pairs in 52.2 ms