RNA–Protein interactions for RNA: ENST00000475339.1

ATG9A-220, Transcript of autophagy related 9A, humanhuman

TSL 2

Gene ATG9A, Length 812 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG9A-220ENST00000475339 DGKDQ16760 1214 aa16.51■□□□□ 0.23
ATG9A-220ENST00000475339 RNF207Q6ZRF8 634 aa16.51■□□□□ 0.23
ATG9A-220ENST00000475339 DHX37Q8IY37 1157 aaKnown RBP16.51■□□□□ 0.23
ATG9A-220ENST00000475339 PPP2R3CQ969Q6 453 aa16.51■□□□□ 0.23
ATG9A-220ENST00000475339 MPHOSPH6Q99547 160 aaKnown RBP16.51■□□□□ 0.23
ATG9A-220ENST00000475339 PLAGL2Q9UPG8 496 aa16.51■□□□□ 0.23
ATG9A-220ENST00000475339 RWDD3Q9Y3V2 267 aa16.51■□□□□ 0.23
ATG9A-220ENST00000475339 HAS3O00219 553 aa16.5■□□□□ 0.23
ATG9A-220ENST00000475339 TSPY3P0CV98 308 aa16.5■□□□□ 0.23
ATG9A-220ENST00000475339 TSPY8P0CW00 308 aa16.5■□□□□ 0.23
ATG9A-220ENST00000475339 DNAJB1P25685 340 aa16.5■□□□□ 0.23
ATG9A-220ENST00000475339 NRIP1P48552 1158 aa16.5■□□□□ 0.23
ATG9A-220ENST00000475339 RPS6P62753 249 aaKnown RBP16.5■□□□□ 0.23
ATG9A-220ENST00000475339 SEPT14Q6ZU15 432 aa16.5■□□□□ 0.23
ATG9A-220ENST00000475339 RBM23Q86U06 439 aaKnown RBP16.5■□□□□ 0.23
ATG9A-220ENST00000475339 NEDD1Q8NHV4 660 aa16.5■□□□□ 0.23
ATG9A-220ENST00000475339 CLEC4DQ8WXI8 215 aa16.5■□□□□ 0.23
ATG9A-220ENST00000475339 CLP1Q92989 425 aaKnown RBP16.5■□□□□ 0.23
ATG9A-220ENST00000475339 STRBPQ96SI9 672 aaKnown RBP16.5■□□□□ 0.23
ATG9A-220ENST00000475339 KATNAL1Q9BW62 490 aa16.5■□□□□ 0.23
ATG9A-220ENST00000475339 RANBP17Q9H2T7 1088 aaKnown RBP16.5■□□□□ 0.23
ATG9A-220ENST00000475339 CFAP47Q6ZTR5 3102 aa16.49■□□□□ 0.23
ATG9A-220ENST00000475339 RNF113AO15541 343 aaKnown RBP16.49■□□□□ 0.23
ATG9A-220ENST00000475339 F2P00734 622 aa16.49■□□□□ 0.23
ATG9A-220ENST00000475339 ATF7P17544 494 aaPredicted RBP16.49■□□□□ 0.23
ATG9A-220ENST00000475339 SERINC5Q86VE9 423 aa16.49■□□□□ 0.23
ATG9A-220ENST00000475339 SUSD6Q92537 303 aa16.49■□□□□ 0.23
ATG9A-220ENST00000475339 ZNF287Q9HBT7 754 aa16.49■□□□□ 0.23
ATG9A-220ENST00000475339 MTMR7Q9Y216 660 aa16.49■□□□□ 0.23
ATG9A-220ENST00000475339 ADGRA3Q8IWK6 1321 aa16.48■□□□□ 0.23
ATG9A-220ENST00000475339 CTSHP09668 335 aa16.48■□□□□ 0.23
ATG9A-220ENST00000475339 SP100P23497 879 aaPredicted RBP16.48■□□□□ 0.23
ATG9A-220ENST00000475339 SLC16A2P36021 539 aa16.48■□□□□ 0.23
ATG9A-220ENST00000475339 RBM10P98175 930 aaKnown RBP16.48■□□□□ 0.23
ATG9A-220ENST00000475339 TFAP4Q01664 338 aa16.48■□□□□ 0.23
ATG9A-220ENST00000475339 PUM1Q14671 1186 aaKnown RBP eCLIP16.48■□□□□ 0.23
ATG9A-220ENST00000475339 TTBK2Q6IQ55 1244 aa16.48■□□□□ 0.23
ATG9A-220ENST00000475339 KIAA2013Q8IYS2 634 aa16.48■□□□□ 0.23
ATG9A-220ENST00000475339 KREMEN2Q8NCW0 462 aa16.48■□□□□ 0.23
ATG9A-220ENST00000475339 DNERQ8NFT8 737 aa16.48■□□□□ 0.23
ATG9A-220ENST00000475339 APPBP2Q92624 585 aa16.48■□□□□ 0.23
ATG9A-220ENST00000475339 EVI5LQ96CN4 794 aa16.48■□□□□ 0.23
ATG9A-220ENST00000475339 PLVAPQ9BX97 442 aa16.48■□□□□ 0.23
ATG9A-220ENST00000475339 PCDHGC5Q9Y5F6 944 aa16.48■□□□□ 0.23
ATG9A-220ENST00000475339 PLIN4Q96Q06 1357 aa16.48■□□□□ 0.23
ATG9A-220ENST00000475339 TRIM6-TRIM34B2RNG4 842 aa16.47■□□□□ 0.23
ATG9A-220ENST00000475339 BTG3Q14201 252 aaPredicted RBP16.47■□□□□ 0.23
ATG9A-220ENST00000475339 ASTLQ6HA08 431 aaPredicted RBP16.47■□□□□ 0.23
ATG9A-220ENST00000475339 GIMAP6Q6P9H5 292 aa16.47■□□□□ 0.23
ATG9A-220ENST00000475339 RC3H2Q9HBD1 1191 aaKnown RBP16.47■□□□□ 0.23
ATG9A-220ENST00000475339 EPB41L4AQ9HCS5 686 aaPredicted RBP16.47■□□□□ 0.23
ATG9A-220ENST00000475339 CHD6Q8TD26 2715 aa16.47■□□□□ 0.23
ATG9A-220ENST00000475339 ATRXP46100 2492 aa16.46■□□□□ 0.23
ATG9A-220ENST00000475339 MAP1BP46821 2468 aaKnown RBP16.46■□□□□ 0.23
ATG9A-220ENST00000475339 B4DLN1 442 aa16.46■□□□□ 0.23
ATG9A-220ENST00000475339 ITGB1P05556 798 aa16.46■□□□□ 0.23
ATG9A-220ENST00000475339 MRPL12P52815 198 aaKnown RBP16.46■□□□□ 0.23
ATG9A-220ENST00000475339 CCDC96Q2M329 555 aa16.46■□□□□ 0.23
ATG9A-220ENST00000475339 SPPL3Q8TCT6 385 aa16.46■□□□□ 0.23
ATG9A-220ENST00000475339 KCNG4Q8TDN1 519 aa16.46■□□□□ 0.23
ATG9A-220ENST00000475339 SMOC2Q9H3U7 446 aa16.46■□□□□ 0.23
ATG9A-220ENST00000475339 STX8Q9UNK0 236 aa16.46■□□□□ 0.23
ATG9A-220ENST00000475339 MYH7P12883 1935 aa16.45■□□□□ 0.22
ATG9A-220ENST00000475339 BRD1O95696 1058 aa16.45■□□□□ 0.22
ATG9A-220ENST00000475339 TDO2P48775 406 aa16.45■□□□□ 0.22
ATG9A-220ENST00000475339 PLEKHM2Q8IWE5 1019 aa16.45■□□□□ 0.22
ATG9A-220ENST00000475339 RILPL2Q969X0 211 aa16.45■□□□□ 0.22
ATG9A-220ENST00000475339 DDX41Q9UJV9 622 aaKnown RBP16.45■□□□□ 0.22
ATG9A-220ENST00000475339 MYO10Q9HD67 2058 aa16.45■□□□□ 0.22
ATG9A-220ENST00000475339 PER2O15055 1255 aa16.44■□□□□ 0.22
ATG9A-220ENST00000475339 MTMR3Q13615 1198 aa16.44■□□□□ 0.22
ATG9A-220ENST00000475339 SYDE2Q5VT97 1194 aa16.44■□□□□ 0.22
ATG9A-220ENST00000475339 UBALD2Q8IYN6 164 aa16.44■□□□□ 0.22
ATG9A-220ENST00000475339 VN1R2Q8NFZ6 395 aa16.44■□□□□ 0.22
ATG9A-220ENST00000475339 APBB2Q92870 758 aa16.44■□□□□ 0.22
ATG9A-220ENST00000475339 ATP6V0A1Q93050 837 aa16.44■□□□□ 0.22
ATG9A-220ENST00000475339 P2RX5Q93086 422 aa16.44■□□□□ 0.22
ATG9A-220ENST00000475339 OSBP2Q969R2 916 aa16.44■□□□□ 0.22
ATG9A-220ENST00000475339 EMID1Q96A84 441 aaPredicted RBP16.44■□□□□ 0.22
ATG9A-220ENST00000475339 TLE6Q9H808 572 aa16.44■□□□□ 0.22
ATG9A-220ENST00000475339 GPAA1O43292 621 aa16.43■□□□□ 0.22
ATG9A-220ENST00000475339 NMT2O60551 498 aa16.43■□□□□ 0.22
ATG9A-220ENST00000475339 GNAT2P19087 354 aa16.43■□□□□ 0.22
ATG9A-220ENST00000475339 KLHL23Q8NBE8 558 aa16.43■□□□□ 0.22
ATG9A-220ENST00000475339 PPTC7Q8NI37 304 aa16.43■□□□□ 0.22
ATG9A-220ENST00000475339 POF1BQ8WVV4 589 aa16.43■□□□□ 0.22
ATG9A-220ENST00000475339 ZNF689Q96CS4 500 aaPredicted RBP16.43■□□□□ 0.22
ATG9A-220ENST00000475339 OSBPL3Q9H4L5 887 aa16.43■□□□□ 0.22
ATG9A-220ENST00000475339 IL17RBQ9NRM6 502 aa16.43■□□□□ 0.22
ATG9A-220ENST00000475339 SORCS3Q9UPU3 1222 aa16.43■□□□□ 0.22
ATG9A-220ENST00000475339 MRPL42Q9Y6G3 142 aaKnown RBP16.43■□□□□ 0.22
ATG9A-220ENST00000475339 C17orf102A2RUQ5 167 aa16.42■□□□□ 0.22
ATG9A-220ENST00000475339 M0R2C6 588 aa16.42■□□□□ 0.22
ATG9A-220ENST00000475339 TREHO43280 583 aa16.42■□□□□ 0.22
ATG9A-220ENST00000475339 APPP05067 770 aa16.42■□□□□ 0.22
ATG9A-220ENST00000475339 ARP10275 920 aa16.42■□□□□ 0.22
ATG9A-220ENST00000475339 CLCN5P51795 746 aa16.42■□□□□ 0.22
ATG9A-220ENST00000475339 LAMC2Q13753 1193 aa16.42■□□□□ 0.22
ATG9A-220ENST00000475339 BTNL9Q6UXG8 535 aa16.42■□□□□ 0.22
ATG9A-220ENST00000475339 ATP8B4Q8TF62 1192 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms