RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 ASPHQ12797 758 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 C11orf57Q6ZUT1 292 aaPredicted RBP11.88□□□□□ -0.51
VAPB-204ENST00000475243 NPC1L1Q9UHC9 1359 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 ABCA5Q8WWZ7 1642 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 BLMP54132 1417 aaPredicted RBP11.88□□□□□ -0.51
VAPB-204ENST00000475243 CIAO1O76071 339 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 IL6STP40189 918 aaPredicted RBP11.88□□□□□ -0.51
VAPB-204ENST00000475243 CCT5P48643 541 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 MECOMQ03112 1051 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 VCX3AQ9NNX9 186 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 SAMSN1Q9NSI8 373 aaKnown RBP11.88□□□□□ -0.51
VAPB-204ENST00000475243 PLCG1P19174 1290 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 ZNF658Q5TYW1 1059 aaPredicted RBP11.88□□□□□ -0.51
VAPB-204ENST00000475243 NSUN7Q8NE18 718 aaKnown RBP11.88□□□□□ -0.51
VAPB-204ENST00000475243 SDCCAG3Q96C92 435 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 HEXIM2Q96MH2 286 aaKnown RBP11.88□□□□□ -0.51
VAPB-204ENST00000475243 ABCC2Q92887 1545 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 FRMD3A2A2Y4 597 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 LAD1O00515 517 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 IRX4P78413 519 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 HSPH1Q92598 858 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 SPTLC3Q9NUV7 552 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 DAAM1Q9Y4D1 1078 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 SART1O43290 800 aaKnown RBP11.88□□□□□ -0.51
VAPB-204ENST00000475243 KRT1P04264 644 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 EIF2AK2P19525 551 aaKnown RBP11.88□□□□□ -0.51
VAPB-204ENST00000475243 CC2D2BQ6DHV5 1058 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 SPATA17Q96L03 361 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 RMDN2Q96LZ7 410 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 KANSL2Q9H9L4 492 aa11.88□□□□□ -0.51
VAPB-204ENST00000475243 INSRP06213 1382 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP11.87□□□□□ -0.51
VAPB-204ENST00000475243 CACNB3P54284 484 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 CTTNQ14247 550 aaKnown RBP11.87□□□□□ -0.51
VAPB-204ENST00000475243 NLRP10Q86W26 655 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 ACRBPQ8NEB7 543 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 PPWD1Q96BP3 646 aaKnown RBP11.87□□□□□ -0.51
VAPB-204ENST00000475243 ALKBH8Q96BT7 664 aaKnown RBP11.87□□□□□ -0.51
VAPB-204ENST00000475243 DNAJC17Q9NVM6 304 aaKnown RBP11.87□□□□□ -0.51
VAPB-204ENST00000475243 TMEM2Q9UHN6 1383 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 IFT88Q13099 833 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 TCP11X2Q5H9J9 407 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 OSBP2Q969R2 916 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 PI4KBQ9UBF8 816 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 G3BP2Q9UN86 482 aaKnown RBP11.87□□□□□ -0.51
VAPB-204ENST00000475243 MMP1P03956 469 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 RPSAP08865 295 aaKnown RBP11.87□□□□□ -0.51
VAPB-204ENST00000475243 SCYL3Q8IZE3 742 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 GDAP1Q8TB36 358 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 MGEA5O60502 916 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 PLA2G4BP0C869 781 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 SRGAP2BP0DMP2 458 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 SLFNL1Q499Z3 407 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 PHLDB3Q6NSJ2 640 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 DNAJC24Q6P3W2 148 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 SPDYE1Q8NFV5 336 aaPredicted RBP11.87□□□□□ -0.51
VAPB-204ENST00000475243 DHTKD1Q96HY7 919 aaPredicted RBP11.87□□□□□ -0.51
VAPB-204ENST00000475243 AK8Q96MA6 479 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 GSDMAQ96QA5 445 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 ZNF341Q9BYN7 854 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 PARVGQ9HBI0 331 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 TRPC5Q9UL62 973 aaPredicted RBP11.87□□□□□ -0.51
VAPB-204ENST00000475243 ATP10DQ9P241 1426 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 GAP43P17677 238 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 FKBP3Q00688 224 aaKnown RBP11.87□□□□□ -0.51
VAPB-204ENST00000475243 ARMC9Q7Z3E5 817 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 RAB44Q7Z6P3 723 aaPredicted RBP11.87□□□□□ -0.51
VAPB-204ENST00000475243 CDC26Q8NHZ8 85 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 RNF217Q8TC41 542 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 STAG1Q8WVM7 1258 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 SLC12A6Q9UHW9 1150 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 BBOF1Q8ND07 529 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 PIGOQ8TEQ8 1089 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 PCDHB6Q9Y5E3 794 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 LMNB2Q03252 620 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 OR6B2Q6IFH4 312 aa11.87□□□□□ -0.51
VAPB-204ENST00000475243 NVLO15381 856 aaKnown RBP11.86□□□□□ -0.51
VAPB-204ENST00000475243 CD2BP2O95400 341 aaKnown RBP11.86□□□□□ -0.51
VAPB-204ENST00000475243 MSH2P43246 934 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 IL9RQ01113 521 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 MAN2A1Q16706 1144 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 BBS5Q8N3I7 341 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 WHAMMQ8TF30 809 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 AP1M1Q9BXS5 423 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 WDR11Q9BZH6 1224 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 POLIQ9UNA4 740 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 VGLL3A8MV65 326 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 GNGT2O14610 69 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 USP14P54578 494 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 FAM49AQ9H0Q0 323 aaPredicted RBP11.86□□□□□ -0.51
VAPB-204ENST00000475243 ZWILCHQ9H900 591 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 GOLGA8CPA6NN73 597 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 TOM1L1O75674 476 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 TTC30AQ86WT1 665 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 PEX3P56589 373 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 MRPS25P82663 173 aaKnown RBP11.86□□□□□ -0.51
VAPB-204ENST00000475243 ARHGEF18Q6ZSZ5 1173 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 CXorf38Q8TB03 319 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 PLEKHF1Q96S99 279 aa11.86□□□□□ -0.51
VAPB-204ENST00000475243 NHEJ1Q9H9Q4 299 aaPredicted RBP11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms