RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 NBPF20Q3BBV1 942 aa18.49■□□□□ 0.55
SRM-204ENST00000475189 NIPA1Q7RTP0 329 aa18.49■□□□□ 0.55
SRM-204ENST00000475189 SH3RF1Q7Z6J0 888 aa18.49■□□□□ 0.55
SRM-204ENST00000475189 GIMAP8Q8ND71 665 aaPredicted RBP18.49■□□□□ 0.55
SRM-204ENST00000475189 KAT2BQ92831 832 aa18.49■□□□□ 0.55
SRM-204ENST00000475189 LLPHQ9BRT6 129 aaKnown RBP18.49■□□□□ 0.55
SRM-204ENST00000475189 SEZ6LQ9BYH1 1024 aa18.49■□□□□ 0.55
SRM-204ENST00000475189 PDLIM7Q9NR12 457 aa18.49■□□□□ 0.55
SRM-204ENST00000475189 PCDH10Q9P2E7 1040 aa18.49■□□□□ 0.55
SRM-204ENST00000475189 TELO2Q9Y4R8 837 aa18.49■□□□□ 0.55
SRM-204ENST00000475189 LTBP2Q14767 1821 aa18.49■□□□□ 0.55
SRM-204ENST00000475189 IGLV3-22A0A075B6J6 115 aa18.48■□□□□ 0.55
SRM-204ENST00000475189 CLTBP09497 229 aa18.48■□□□□ 0.55
SRM-204ENST00000475189 FAAP100Q0VG06 881 aa18.48■□□□□ 0.55
SRM-204ENST00000475189 FAM126BQ8IXS8 530 aa18.48■□□□□ 0.55
SRM-204ENST00000475189 GPR20Q99678 358 aa18.48■□□□□ 0.55
SRM-204ENST00000475189 PKD2L1Q9P0L9 805 aa18.48■□□□□ 0.55
SRM-204ENST00000475189 TRIM43BA6NCK2 446 aa18.47■□□□□ 0.55
SRM-204ENST00000475189 CD4P01730 458 aa18.47■□□□□ 0.55
SRM-204ENST00000475189 ZNF286BP0CG31 522 aa18.47■□□□□ 0.55
SRM-204ENST00000475189 CIITAP33076 1130 aa18.47■□□□□ 0.55
SRM-204ENST00000475189 PLA2G4DQ86XP0 818 aa18.47■□□□□ 0.55
SRM-204ENST00000475189 OXER1Q8TDS5 423 aa18.47■□□□□ 0.55
SRM-204ENST00000475189 TBCKQ8TEA7 893 aa18.47■□□□□ 0.55
SRM-204ENST00000475189 PPP1R13LQ8WUF5 828 aa18.47■□□□□ 0.55
SRM-204ENST00000475189 TRIM43Q96BQ3 446 aaPredicted RBP18.47■□□□□ 0.55
SRM-204ENST00000475189 AGO4Q9HCK5 861 aaKnown RBP18.47■□□□□ 0.55
SRM-204ENST00000475189 PRDM5Q9NQX1 630 aaPredicted RBP18.47■□□□□ 0.55
SRM-204ENST00000475189 TRIP12Q14669 1992 aaPredicted RBP18.46■□□□□ 0.55
SRM-204ENST00000475189 NOP56O00567 594 aaKnown RBP18.46■□□□□ 0.55
SRM-204ENST00000475189 TLR3O15455 904 aaKnown RBP18.46■□□□□ 0.55
SRM-204ENST00000475189 PSEN2P49810 448 aa18.46■□□□□ 0.55
SRM-204ENST00000475189 USP11P51784 963 aa18.46■□□□□ 0.55
SRM-204ENST00000475189 SP4Q02446 784 aa18.46■□□□□ 0.55
SRM-204ENST00000475189 ITGB3BPQ13352 177 aaPredicted RBP18.46■□□□□ 0.55
SRM-204ENST00000475189 NFRKBQ6P4R8 1299 aa18.46■□□□□ 0.55
SRM-204ENST00000475189 TMX3Q96JJ7 454 aa18.46■□□□□ 0.55
SRM-204ENST00000475189 C16orf70Q9BSU1 422 aa18.46■□□□□ 0.55
SRM-204ENST00000475189 PRKAG2Q9UGJ0 569 aa18.46■□□□□ 0.55
SRM-204ENST00000475189 NFASCO94856 1347 aa18.46■□□□□ 0.55
SRM-204ENST00000475189 HAS3O00219 553 aa18.45■□□□□ 0.54
SRM-204ENST00000475189 KIAA0355O15063 1070 aa18.45■□□□□ 0.54
SRM-204ENST00000475189 F2P00734 622 aa18.45■□□□□ 0.54
SRM-204ENST00000475189 LGALS2P05162 132 aa18.45■□□□□ 0.54
SRM-204ENST00000475189 MCM2P49736 904 aa18.45■□□□□ 0.54
SRM-204ENST00000475189 FOSBP53539 338 aa18.45■□□□□ 0.54
SRM-204ENST00000475189 CHMP4BP1P59074 171 aa18.45■□□□□ 0.54
SRM-204ENST00000475189 NONOQ15233 471 aaKnown RBP eCLIP18.45■□□□□ 0.54
SRM-204ENST00000475189 KRT40Q6A162 431 aa18.45■□□□□ 0.54
SRM-204ENST00000475189 KRT25Q7Z3Z0 450 aa18.45■□□□□ 0.54
SRM-204ENST00000475189 TRPV6Q9H1D0 765 aa18.45■□□□□ 0.54
SRM-204ENST00000475189 TMEM39AQ9NV64 488 aa18.45■□□□□ 0.54
SRM-204ENST00000475189 TBX21Q9UL17 535 aa18.45■□□□□ 0.54
SRM-204ENST00000475189 KAT6AQ92794 2004 aa18.45■□□□□ 0.54
SRM-204ENST00000475189 GSTTP1A0A1W2PQM5 241 aa18.44■□□□□ 0.54
SRM-204ENST00000475189 B4GALT4O60513 344 aa18.44■□□□□ 0.54
SRM-204ENST00000475189 MMP1P03956 469 aa18.44■□□□□ 0.54
SRM-204ENST00000475189 MAGEA10P43363 369 aaPredicted RBP18.44■□□□□ 0.54
SRM-204ENST00000475189 HMGN5P82970 282 aaKnown RBP18.44■□□□□ 0.54
SRM-204ENST00000475189 SETQ01105 290 aaPredicted RBP18.44■□□□□ 0.54
SRM-204ENST00000475189 PTPN11Q06124 597 aaPredicted RBP18.44■□□□□ 0.54
SRM-204ENST00000475189 MFSD10Q14728 455 aa18.44■□□□□ 0.54
SRM-204ENST00000475189 INF2Q27J81 1249 aa18.44■□□□□ 0.54
SRM-204ENST00000475189 KIAA0753Q2KHM9 967 aa18.44■□□□□ 0.54
SRM-204ENST00000475189 PRR16Q569H4 304 aa18.44■□□□□ 0.54
SRM-204ENST00000475189 FAM47CQ5HY64 1035 aa18.44■□□□□ 0.54
SRM-204ENST00000475189 CHRDL2Q6WN34 429 aa18.44■□□□□ 0.54
SRM-204ENST00000475189 SEPT1Q8WYJ6 367 aa18.44■□□□□ 0.54
SRM-204ENST00000475189 LENG9Q96B70 501 aa18.44■□□□□ 0.54
SRM-204ENST00000475189 GDF15Q99988 308 aa18.44■□□□□ 0.54
SRM-204ENST00000475189 KATNAL1Q9BW62 490 aa18.44■□□□□ 0.54
SRM-204ENST00000475189 SLC9A2Q9UBY0 812 aa18.44■□□□□ 0.54
SRM-204ENST00000475189 WDR81Q562E7 1941 aa18.43■□□□□ 0.54
SRM-204ENST00000475189 CCDC194A0A1B0GVG4 234 aa18.43■□□□□ 0.54
SRM-204ENST00000475189 DHX15O43143 795 aaKnown RBP18.43■□□□□ 0.54
SRM-204ENST00000475189 ITGB8P26012 769 aa18.43■□□□□ 0.54
SRM-204ENST00000475189 KRT2P35908 639 aa18.43■□□□□ 0.54
SRM-204ENST00000475189 NR5A1Q13285 461 aa18.43■□□□□ 0.54
SRM-204ENST00000475189 TRIM29Q14134 588 aa18.43■□□□□ 0.54
SRM-204ENST00000475189 EARS2Q5JPH6 523 aaKnown RBP18.43■□□□□ 0.54
SRM-204ENST00000475189 SESTD1Q86VW0 696 aa18.43■□□□□ 0.54
SRM-204ENST00000475189 TNFRSF25Q93038 417 aa18.43■□□□□ 0.54
SRM-204ENST00000475189 UIMC1Q96RL1 719 aa18.43■□□□□ 0.54
SRM-204ENST00000475189 SDF4Q9BRK5 362 aa18.43■□□□□ 0.54
SRM-204ENST00000475189 PRO3102Q9H379 93 aa18.43■□□□□ 0.54
SRM-204ENST00000475189 JPH1Q9HDC5 661 aaPredicted RBP18.43■□□□□ 0.54
SRM-204ENST00000475189 TRMT13Q9NUP7 481 aaKnown RBP18.43■□□□□ 0.54
SRM-204ENST00000475189 COLQQ9Y215 455 aaPredicted RBP18.43■□□□□ 0.54
SRM-204ENST00000475189 CYP3A7-CYP3A51PA0A087WV96 503 aa18.42■□□□□ 0.54
SRM-204ENST00000475189 H3BRB1 525 aa18.42■□□□□ 0.54
SRM-204ENST00000475189 IPO5O00410 1097 aaKnown RBP18.42■□□□□ 0.54
SRM-204ENST00000475189 CYP3A7P24462 503 aa18.42■□□□□ 0.54
SRM-204ENST00000475189 TCF7P36402 384 aaPredicted RBP18.42■□□□□ 0.54
SRM-204ENST00000475189 MDM2Q00987 491 aaPredicted RBP18.42■□□□□ 0.54
SRM-204ENST00000475189 UTP14CQ5TAP6 766 aaKnown RBP18.42■□□□□ 0.54
SRM-204ENST00000475189 PIK3AP1Q6ZUJ8 805 aa18.42■□□□□ 0.54
SRM-204ENST00000475189 TRIM50Q86XT4 487 aa18.42■□□□□ 0.54
SRM-204ENST00000475189 MBOAT7Q96N66 472 aa18.42■□□□□ 0.54
SRM-204ENST00000475189 ZNF577Q9BSK1 485 aa18.42■□□□□ 0.54
SRM-204ENST00000475189 TUT1Q9H6E5 874 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms