RNA–Protein interactions for RNA: ENST00000474644.1

COL1A1-204, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 640 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-204ENST00000474644 MMP3P08254 477 aa17.87■□□□□ 0.45
COL1A1-204ENST00000474644 COL6A1P12109 1028 aa17.87■□□□□ 0.45
COL1A1-204ENST00000474644 GCFC2P16383 781 aaKnown RBP17.87■□□□□ 0.45
COL1A1-204ENST00000474644 SYT1P21579 422 aa17.87■□□□□ 0.45
COL1A1-204ENST00000474644 KCNA10Q16322 511 aa17.87■□□□□ 0.45
COL1A1-204ENST00000474644 MCTP1Q6DN14 999 aa17.87■□□□□ 0.45
COL1A1-204ENST00000474644 PPP4R3AQ6IN85 833 aa17.87■□□□□ 0.45
COL1A1-204ENST00000474644 PCSK9Q8NBP7 692 aaKnown RBP17.87■□□□□ 0.45
COL1A1-204ENST00000474644 PPTC7Q8NI37 304 aa17.87■□□□□ 0.45
COL1A1-204ENST00000474644 PAWRQ96IZ0 340 aaKnown RBP17.87■□□□□ 0.45
COL1A1-204ENST00000474644 SPATA33Q96N06 139 aa17.87■□□□□ 0.45
COL1A1-204ENST00000474644 NAP1L4Q99733 375 aaKnown RBP17.87■□□□□ 0.45
COL1A1-204ENST00000474644 ZNF577Q9BSK1 485 aa17.87■□□□□ 0.45
COL1A1-204ENST00000474644 TSEN34Q9BSV6 310 aaKnown RBP17.87■□□□□ 0.45
COL1A1-204ENST00000474644 MLXIPQ9HAP2 919 aa17.87■□□□□ 0.45
COL1A1-204ENST00000474644 DDX25Q9UHL0 483 aaKnown RBP17.87■□□□□ 0.45
COL1A1-204ENST00000474644 MKI67P46013 3256 aaKnown RBP17.87■□□□□ 0.45
COL1A1-204ENST00000474644 MOXD2PA6NHM9 499 aa17.86■□□□□ 0.45
COL1A1-204ENST00000474644 IPO5O00410 1097 aaKnown RBP17.86■□□□□ 0.45
COL1A1-204ENST00000474644 MSH4O15457 936 aa17.86■□□□□ 0.45
COL1A1-204ENST00000474644 ASGR1P07306 291 aa17.86■□□□□ 0.45
COL1A1-204ENST00000474644 ACLYP53396 1101 aa17.86■□□□□ 0.45
COL1A1-204ENST00000474644 HSDL1Q3SXM5 330 aa17.86■□□□□ 0.45
COL1A1-204ENST00000474644 UIMC1Q96RL1 719 aa17.86■□□□□ 0.45
COL1A1-204ENST00000474644 C11orf49Q9H6J7 331 aa17.86■□□□□ 0.45
COL1A1-204ENST00000474644 TELO2Q9Y4R8 837 aa17.86■□□□□ 0.45
COL1A1-204ENST00000474644 NFASCO94856 1347 aa17.86■□□□□ 0.45
COL1A1-204ENST00000474644 CEP290O15078 2479 aa17.86■□□□□ 0.45
COL1A1-204ENST00000474644 ZEB2O60315 1214 aa17.85■□□□□ 0.45
COL1A1-204ENST00000474644 SLC34A2O95436 690 aa17.85■□□□□ 0.45
COL1A1-204ENST00000474644 HOXD8P13378 290 aaPredicted RBP17.85■□□□□ 0.45
COL1A1-204ENST00000474644 SP4Q02446 784 aa17.85■□□□□ 0.45
COL1A1-204ENST00000474644 BRDTQ58F21 947 aaPredicted RBP17.85■□□□□ 0.45
COL1A1-204ENST00000474644 SDF4Q9BRK5 362 aa17.85■□□□□ 0.45
COL1A1-204ENST00000474644 JPH1Q9HDC5 661 aaPredicted RBP17.85■□□□□ 0.45
COL1A1-204ENST00000474644 A0A1W2PQ45 241 aaPredicted RBP17.84■□□□□ 0.45
COL1A1-204ENST00000474644 A0A1W2PQY0 241 aa17.84■□□□□ 0.45
COL1A1-204ENST00000474644 NOP56O00567 594 aaKnown RBP17.84■□□□□ 0.45
COL1A1-204ENST00000474644 DHX15O43143 795 aaKnown RBP17.84■□□□□ 0.45
COL1A1-204ENST00000474644 STX6O43752 255 aa17.84■□□□□ 0.45
COL1A1-204ENST00000474644 MYL3P08590 195 aa17.84■□□□□ 0.45
COL1A1-204ENST00000474644 ATP2B1P20020 1258 aa17.84■□□□□ 0.45
COL1A1-204ENST00000474644 TRAPPC10P48553 1259 aa17.84■□□□□ 0.45
COL1A1-204ENST00000474644 PURAQ00577 322 aaKnown RBP17.84■□□□□ 0.45
COL1A1-204ENST00000474644 CXCL17Q6UXB2 119 aa17.84■□□□□ 0.45
COL1A1-204ENST00000474644 NECAB2Q7Z6G3 386 aa17.84■□□□□ 0.45
COL1A1-204ENST00000474644 POTEDQ86YR6 584 aa17.84■□□□□ 0.45
COL1A1-204ENST00000474644 ETNPPLQ8TBG4 499 aa17.84■□□□□ 0.45
COL1A1-204ENST00000474644 SLC5A5Q92911 643 aa17.84■□□□□ 0.45
COL1A1-204ENST00000474644 FERMT2Q96AC1 680 aa17.84■□□□□ 0.45
COL1A1-204ENST00000474644 GPR20Q99678 358 aa17.84■□□□□ 0.45
COL1A1-204ENST00000474644 KCNMB3Q9NPA1 279 aa17.84■□□□□ 0.45
COL1A1-204ENST00000474644 POLR3EQ9NVU0 708 aa17.84■□□□□ 0.45
COL1A1-204ENST00000474644 SLC9A2Q9UBY0 812 aa17.84■□□□□ 0.45
COL1A1-204ENST00000474644 NOL7Q9UMY1 257 aaKnown RBP17.84■□□□□ 0.45
COL1A1-204ENST00000474644 MTMR6Q9Y217 621 aa17.84■□□□□ 0.45
COL1A1-204ENST00000474644 DDX39AO00148 427 aaKnown RBP17.83■□□□□ 0.44
COL1A1-204ENST00000474644 DGKDQ16760 1214 aa17.83■□□□□ 0.44
COL1A1-204ENST00000474644 TTC38Q5R3I4 469 aa17.83■□□□□ 0.44
COL1A1-204ENST00000474644 FERMT3Q86UX7 667 aa17.83■□□□□ 0.44
COL1A1-204ENST00000474644 GJA10Q969M2 543 aa17.83■□□□□ 0.44
COL1A1-204ENST00000474644 RIT2Q99578 217 aa17.83■□□□□ 0.44
COL1A1-204ENST00000474644 SENP6Q9GZR1 1112 aaPredicted RBP17.83■□□□□ 0.44
COL1A1-204ENST00000474644 TBC1D22BQ9NU19 505 aa17.83■□□□□ 0.44
COL1A1-204ENST00000474644 DOCK5Q9H7D0 1870 aa17.82■□□□□ 0.44
COL1A1-204ENST00000474644 CCNE2O96020 404 aa17.82■□□□□ 0.44
COL1A1-204ENST00000474644 ZNF286BP0CG31 522 aa17.82■□□□□ 0.44
COL1A1-204ENST00000474644 TOB1P50616 345 aaPredicted RBP17.82■□□□□ 0.44
COL1A1-204ENST00000474644 ORC2Q13416 577 aaPredicted RBP17.82■□□□□ 0.44
COL1A1-204ENST00000474644 NBR1Q14596 966 aa17.82■□□□□ 0.44
COL1A1-204ENST00000474644 BRAPQ7Z569 592 aa17.82■□□□□ 0.44
COL1A1-204ENST00000474644 ELP1O95163 1332 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 TBX3O15119 743 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 NEMFO60524 1076 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 KPNA6O60684 536 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 GAS7O60861 476 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 PPFIA4O75335 1185 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 PSMD10O75832 226 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 CABYRO75952 493 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 MCM7P33993 719 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 ACTR2P61160 394 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 RESTQ13127 1097 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 RILPL1Q5EBL4 403 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 LRCH2Q5VUJ6 765 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 HAS1Q92839 578 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 GLT1D1Q96MS3 346 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 MTG1Q9BT17 334 aaPredicted RBP17.81■□□□□ 0.44
COL1A1-204ENST00000474644 TEKT3Q9BXF9 490 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 STARD7Q9NQZ5 370 aa17.81■□□□□ 0.44
COL1A1-204ENST00000474644 GSTTP1A0A1W2PQM5 241 aa17.8■□□□□ 0.44
COL1A1-204ENST00000474644 F2P00734 622 aa17.8■□□□□ 0.44
COL1A1-204ENST00000474644 LGALS2P05162 132 aa17.8■□□□□ 0.44
COL1A1-204ENST00000474644 TCF7P36402 384 aaPredicted RBP17.8■□□□□ 0.44
COL1A1-204ENST00000474644 PSMC6P62333 389 aa17.8■□□□□ 0.44
COL1A1-204ENST00000474644 KRT76Q01546 638 aa17.8■□□□□ 0.44
COL1A1-204ENST00000474644 ZNF174Q15697 407 aa17.8■□□□□ 0.44
COL1A1-204ENST00000474644 CALCRLQ16602 461 aa17.8■□□□□ 0.44
COL1A1-204ENST00000474644 ZNF746Q6NUN9 644 aaPredicted RBP17.8■□□□□ 0.44
COL1A1-204ENST00000474644 SEPT1Q8WYJ6 367 aa17.8■□□□□ 0.44
COL1A1-204ENST00000474644 KAT2BQ92831 832 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms