RNA–Protein interactions for RNA: ENST00000474546.1

CCDC93-208, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 452 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-208ENST00000474546 RUNDC3BQ96NL0 473 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 CHP1Q99653 195 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 ISCUQ9H1K1 167 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 FAM114A2Q9NRY5 505 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 CEP72Q9P209 647 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 ARPP21Q9UBL0 812 aaPredicted RBP8.83□□□□□ -1
CCDC93-208ENST00000474546 INTUQ9ULD6 942 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 PCDHA4Q9UN74 947 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 STK24Q9Y6E0 443 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 EYSQ5T1H1 3165 aa8.83□□□□□ -1
CCDC93-208ENST00000474546 C5orf60A6NFR6 353 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 SOX1O00570 391 aaPredicted RBP8.82□□□□□ -1
CCDC93-208ENST00000474546 DNAJC8O75937 253 aaPredicted RBP8.82□□□□□ -1
CCDC93-208ENST00000474546 CHGBP05060 677 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 GNA11P29992 359 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 ELF1P32519 619 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 FUT2Q10981 343 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 CDC37Q16543 378 aaPredicted RBP8.82□□□□□ -1
CCDC93-208ENST00000474546 TMEM266Q2M3C6 531 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 PARP10Q53GL7 1025 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 HAUS3Q68CZ6 603 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 FOXR1Q6PIV2 292 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 PPP4R3CPQ6ZMV5 832 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 GUF1Q8N442 669 aaKnown RBP8.82□□□□□ -1
CCDC93-208ENST00000474546 MAGEB6Q8N7X4 407 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 GPATCH11Q8N954 259 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 MYCBPAPQ8TBZ2 947 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 ZNF473Q8WTR7 871 aaKnown RBP8.82□□□□□ -1
CCDC93-208ENST00000474546 ZNF594Q96JF6 807 aaPredicted RBP8.82□□□□□ -1
CCDC93-208ENST00000474546 CNOT6LQ96LI5 555 aaKnown RBP8.82□□□□□ -1
CCDC93-208ENST00000474546 CEP63Q96MT8 703 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 CCT8L2Q96SF2 557 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 PUS3Q9BZE2 481 aaKnown RBP8.82□□□□□ -1
CCDC93-208ENST00000474546 RAB17Q9H0T7 212 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 ZBTB3Q9H5J0 574 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 PIH1D3Q9NQM4 214 aaKnown RBP8.82□□□□□ -1
CCDC93-208ENST00000474546 ATP8A2Q9NTI2 1148 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 MTMR10Q9NXD2 777 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 PARP2Q9UGN5 583 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 PRUNE2Q8WUY3 3088 aa8.82□□□□□ -1
CCDC93-208ENST00000474546 LTBP3Q9NS15 1303 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 HTTP42858 3142 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 MAGEB6P1A0A0J9YX57 407 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 MACROD2A1Z1Q3 448 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 ENC1O14682 589 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 LIN7AO14910 233 aaPredicted RBP8.81□□□□□ -1
CCDC93-208ENST00000474546 GNPATO15228 680 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 RASSF9O75901 435 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 HEXIM1O94992 359 aaKnown RBP8.81□□□□□ -1
CCDC93-208ENST00000474546 RXRAP19793 462 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 ATP5DP30049 168 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 IGHMBP2P38935 993 aaKnown RBP8.81□□□□□ -1
CCDC93-208ENST00000474546 GRIN1Q05586 938 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 C2orf54Q08AI8 447 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 TROAPQ12815 778 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 XRCC4Q13426 336 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 SCARF1Q14162 830 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 ITIH4Q14624 930 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 ZNF174Q15697 407 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 PKN1Q16512 942 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 RRP12Q5JTH9 1297 aaKnown RBP8.81□□□□□ -1
CCDC93-208ENST00000474546 TRAPPC3LQ5T215 181 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 RNF187Q5TA31 235 aaPredicted RBP8.81□□□□□ -1
CCDC93-208ENST00000474546 CENPPQ6IPU0 288 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 DGKHQ86XP1 1220 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 RAB11FIP4Q86YS3 637 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 PARP9Q8IXQ6 854 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 CCDC13Q8IYE1 715 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 TEX11Q8IYF3 940 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 KCTD17Q8N5Z5 321 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 ACTRT1Q8TDG2 376 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 ANKS1AQ92625 1134 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 VTI1AQ96AJ9 217 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 IFT74Q96LB3 600 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 CCDC43Q96MW1 224 aaKnown RBP8.81□□□□□ -1
CCDC93-208ENST00000474546 LRRC1Q9BTT6 524 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 NDST4Q9H3R1 872 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 EPB41L4AQ9HCS5 686 aaPredicted RBP8.81□□□□□ -1
CCDC93-208ENST00000474546 BMP2KQ9NSY1 1161 aaPredicted RBP8.81□□□□□ -1
CCDC93-208ENST00000474546 VPS54Q9P1Q0 977 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 LRP2BPQ9P2M1 347 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 MCM8Q9UJA3 840 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 ODF2LQ9ULJ1 636 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 PCDHGC5Q9Y5F6 944 aa8.81□□□□□ -1
CCDC93-208ENST00000474546 V9GY48 417 aaPredicted RBP8.81□□□□□ -1
CCDC93-208ENST00000474546 CNTNAP5Q8WYK1 1306 aa8.8□□□□□ -1
CCDC93-208ENST00000474546 A0A087X0B3 334 aa8.8□□□□□ -1
CCDC93-208ENST00000474546 A0A0A6YYK5 440 aaPredicted RBP8.8□□□□□ -1
CCDC93-208ENST00000474546 B4DLN1 442 aa8.8□□□□□ -1
CCDC93-208ENST00000474546 IRS4O14654 1257 aaPredicted RBP8.8□□□□□ -1
CCDC93-208ENST00000474546 PPP1R12AO14974 1030 aaPredicted RBP8.8□□□□□ -1
CCDC93-208ENST00000474546 FLOT1O75955 427 aa8.8□□□□□ -1
CCDC93-208ENST00000474546 EN2P19622 333 aaPredicted RBP8.8□□□□□ -1
CCDC93-208ENST00000474546 GUCY1A2P33402 732 aa8.8□□□□□ -1
CCDC93-208ENST00000474546 NPEPPSP55786 919 aa8.8□□□□□ -1
CCDC93-208ENST00000474546 SATB1Q01826 763 aa8.8□□□□□ -1
CCDC93-208ENST00000474546 PDE4DQ08499 809 aa8.8□□□□□ -1
CCDC93-208ENST00000474546 ITGB3BPQ13352 177 aaPredicted RBP8.8□□□□□ -1
CCDC93-208ENST00000474546 NAB2Q15742 525 aa8.8□□□□□ -1
CCDC93-208ENST00000474546 CCDC152Q4G0S7 254 aa8.8□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms