RNA–Protein interactions for RNA: ENST00000474384.2

SNRPB-203, Transcript of small nuclear ribonucleoprotein polypeptides B and B1, humanhuman

TSL 5

Gene SNRPB, Length 985 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPB-203ENST00000474384 SPATA33Q96N06 139 aa20.57■□□□□ 0.88
SNRPB-203ENST00000474384 NAP1L4Q99733 375 aaKnown RBP20.57■□□□□ 0.88
SNRPB-203ENST00000474384 ZNF577Q9BSK1 485 aa20.57■□□□□ 0.88
SNRPB-203ENST00000474384 DDX25Q9UHL0 483 aaKnown RBP20.57■□□□□ 0.88
SNRPB-203ENST00000474384 A6NJR5 290 aa20.56■□□□□ 0.88
SNRPB-203ENST00000474384 IPO5O00410 1097 aaKnown RBP20.56■□□□□ 0.88
SNRPB-203ENST00000474384 MSH4O15457 936 aa20.56■□□□□ 0.88
SNRPB-203ENST00000474384 SLC37A4O43826 429 aa20.56■□□□□ 0.88
SNRPB-203ENST00000474384 GCFC2P16383 781 aaKnown RBP20.56■□□□□ 0.88
SNRPB-203ENST00000474384 HSDL1Q3SXM5 330 aa20.56■□□□□ 0.88
SNRPB-203ENST00000474384 BRDTQ58F21 947 aaPredicted RBP20.56■□□□□ 0.88
SNRPB-203ENST00000474384 METTL7BQ6UX53 244 aa20.56■□□□□ 0.88
SNRPB-203ENST00000474384 PCSK9Q8NBP7 692 aaKnown RBP20.56■□□□□ 0.88
SNRPB-203ENST00000474384 SDF4Q9BRK5 362 aa20.56■□□□□ 0.88
SNRPB-203ENST00000474384 TSEN34Q9BSV6 310 aaKnown RBP20.56■□□□□ 0.88
SNRPB-203ENST00000474384 TELO2Q9Y4R8 837 aa20.56■□□□□ 0.88
SNRPB-203ENST00000474384 STX6O43752 255 aa20.55■□□□□ 0.88
SNRPB-203ENST00000474384 ASGR1P07306 291 aa20.55■□□□□ 0.88
SNRPB-203ENST00000474384 ACLYP53396 1101 aa20.55■□□□□ 0.88
SNRPB-203ENST00000474384 SP4Q02446 784 aa20.55■□□□□ 0.88
SNRPB-203ENST00000474384 FERMT3Q86UX7 667 aa20.55■□□□□ 0.88
SNRPB-203ENST00000474384 FERMT2Q96AC1 680 aa20.55■□□□□ 0.88
SNRPB-203ENST00000474384 NOL7Q9UMY1 257 aaKnown RBP20.55■□□□□ 0.88
SNRPB-203ENST00000474384 MTMR6Q9Y217 621 aa20.55■□□□□ 0.88
SNRPB-203ENST00000474384 DNAH12Q6ZR08 3092 aa20.55■□□□□ 0.88
SNRPB-203ENST00000474384 NFASCO94856 1347 aa20.54■□□□□ 0.88
SNRPB-203ENST00000474384 DDX39AO00148 427 aaKnown RBP20.54■□□□□ 0.88
SNRPB-203ENST00000474384 DHX15O43143 795 aaKnown RBP20.54■□□□□ 0.88
SNRPB-203ENST00000474384 ZEB2O60315 1214 aa20.54■□□□□ 0.88
SNRPB-203ENST00000474384 MMP3P08254 477 aa20.54■□□□□ 0.88
SNRPB-203ENST00000474384 MYL3P08590 195 aa20.54■□□□□ 0.88
SNRPB-203ENST00000474384 NECAB2Q7Z6G3 386 aa20.54■□□□□ 0.88
SNRPB-203ENST00000474384 UBE2Q1Q7Z7E8 422 aa20.54■□□□□ 0.88
SNRPB-203ENST00000474384 PPTC7Q8NI37 304 aa20.54■□□□□ 0.88
SNRPB-203ENST00000474384 GJA10Q969M2 543 aa20.54■□□□□ 0.88
SNRPB-203ENST00000474384 SENP6Q9GZR1 1112 aaPredicted RBP20.54■□□□□ 0.88
SNRPB-203ENST00000474384 PHF24Q9UPV7 400 aa20.54■□□□□ 0.88
SNRPB-203ENST00000474384 MOXD2PA6NHM9 499 aa20.53■□□□□ 0.88
SNRPB-203ENST00000474384 NOP56O00567 594 aaKnown RBP20.53■□□□□ 0.88
SNRPB-203ENST00000474384 COL6A1P12109 1028 aa20.53■□□□□ 0.88
SNRPB-203ENST00000474384 TOB1P50616 345 aaPredicted RBP20.53■□□□□ 0.88
SNRPB-203ENST00000474384 ZNF174Q15697 407 aa20.53■□□□□ 0.88
SNRPB-203ENST00000474384 TTC38Q5R3I4 469 aa20.53■□□□□ 0.88
SNRPB-203ENST00000474384 CXCL17Q6UXB2 119 aa20.53■□□□□ 0.88
SNRPB-203ENST00000474384 POTEDQ86YR6 584 aa20.53■□□□□ 0.88
SNRPB-203ENST00000474384 ETNPPLQ8TBG4 499 aa20.53■□□□□ 0.88
SNRPB-203ENST00000474384 SLC5A5Q92911 643 aa20.53■□□□□ 0.88
SNRPB-203ENST00000474384 GPR20Q99678 358 aa20.53■□□□□ 0.88
SNRPB-203ENST00000474384 C11orf49Q9H6J7 331 aa20.53■□□□□ 0.88
SNRPB-203ENST00000474384 JPH1Q9HDC5 661 aaPredicted RBP20.53■□□□□ 0.88
SNRPB-203ENST00000474384 TBC1D22BQ9NU19 505 aa20.53■□□□□ 0.88
SNRPB-203ENST00000474384 SLC9A2Q9UBY0 812 aa20.53■□□□□ 0.88
SNRPB-203ENST00000474384 A0A1W2PQ45 241 aaPredicted RBP20.52■□□□□ 0.88
SNRPB-203ENST00000474384 A0A1W2PQY0 241 aa20.52■□□□□ 0.88
SNRPB-203ENST00000474384 PPFIA4O75335 1185 aa20.52■□□□□ 0.88
SNRPB-203ENST00000474384 MCM7P33993 719 aa20.52■□□□□ 0.88
SNRPB-203ENST00000474384 TRAPPC10P48553 1259 aa20.52■□□□□ 0.88
SNRPB-203ENST00000474384 NBR1Q14596 966 aa20.52■□□□□ 0.88
SNRPB-203ENST00000474384 DGKDQ16760 1214 aa20.52■□□□□ 0.88
SNRPB-203ENST00000474384 POLR3EQ9NVU0 708 aa20.52■□□□□ 0.88
SNRPB-203ENST00000474384 MKI67P46013 3256 aaKnown RBP20.52■□□□□ 0.87
SNRPB-203ENST00000474384 GSTTP1A0A1W2PQM5 241 aa20.51■□□□□ 0.87
SNRPB-203ENST00000474384 MARCH6O60337 910 aa20.51■□□□□ 0.87
SNRPB-203ENST00000474384 KPNA6O60684 536 aa20.51■□□□□ 0.87
SNRPB-203ENST00000474384 CCNE2O96020 404 aa20.51■□□□□ 0.87
SNRPB-203ENST00000474384 ANP32AP39687 249 aaKnown RBP20.51■□□□□ 0.87
SNRPB-203ENST00000474384 PURAQ00577 322 aaKnown RBP20.51■□□□□ 0.87
SNRPB-203ENST00000474384 LRCH2Q5VUJ6 765 aa20.51■□□□□ 0.87
SNRPB-203ENST00000474384 BRAPQ7Z569 592 aa20.51■□□□□ 0.87
SNRPB-203ENST00000474384 HAS1Q92839 578 aa20.51■□□□□ 0.87
SNRPB-203ENST00000474384 VTI1AQ96AJ9 217 aa20.51■□□□□ 0.87
SNRPB-203ENST00000474384 RIT2Q99578 217 aa20.51■□□□□ 0.87
SNRPB-203ENST00000474384 KCNMB3Q9NPA1 279 aa20.51■□□□□ 0.87
SNRPB-203ENST00000474384 NEMFO60524 1076 aa20.5■□□□□ 0.87
SNRPB-203ENST00000474384 GAS7O60861 476 aa20.5■□□□□ 0.87
SNRPB-203ENST00000474384 PSMD10O75832 226 aa20.5■□□□□ 0.87
SNRPB-203ENST00000474384 HOXD8P13378 290 aaPredicted RBP20.5■□□□□ 0.87
SNRPB-203ENST00000474384 ACTR2P61160 394 aa20.5■□□□□ 0.87
SNRPB-203ENST00000474384 RESTQ13127 1097 aa20.5■□□□□ 0.87
SNRPB-203ENST00000474384 RILPL1Q5EBL4 403 aa20.5■□□□□ 0.87
SNRPB-203ENST00000474384 SEPT1Q8WYJ6 367 aa20.5■□□□□ 0.87
SNRPB-203ENST00000474384 FAM20AQ96MK3 541 aa20.5■□□□□ 0.87
SNRPB-203ENST00000474384 GLT1D1Q96MS3 346 aa20.5■□□□□ 0.87
SNRPB-203ENST00000474384 MTG1Q9BT17 334 aaPredicted RBP20.5■□□□□ 0.87
SNRPB-203ENST00000474384 TEKT3Q9BXF9 490 aa20.5■□□□□ 0.87
SNRPB-203ENST00000474384 PCDHB6Q9Y5E3 794 aa20.5■□□□□ 0.87
SNRPB-203ENST00000474384 TBX3O15119 743 aa20.49■□□□□ 0.87
SNRPB-203ENST00000474384 CABYRO75952 493 aa20.49■□□□□ 0.87
SNRPB-203ENST00000474384 BAG4O95429 457 aaKnown RBP20.49■□□□□ 0.87
SNRPB-203ENST00000474384 ZNF286BP0CG31 522 aa20.49■□□□□ 0.87
SNRPB-203ENST00000474384 TCF7P36402 384 aaPredicted RBP20.49■□□□□ 0.87
SNRPB-203ENST00000474384 ATN1P54259 1190 aaPredicted RBP20.49■□□□□ 0.87
SNRPB-203ENST00000474384 PSMC6P62333 389 aa20.49■□□□□ 0.87
SNRPB-203ENST00000474384 PKP1Q13835 747 aa20.49■□□□□ 0.87
SNRPB-203ENST00000474384 CALCRLQ16602 461 aa20.49■□□□□ 0.87
SNRPB-203ENST00000474384 UTP14CQ5TAP6 766 aaKnown RBP20.49■□□□□ 0.87
SNRPB-203ENST00000474384 FOXD4L5Q5VV16 416 aaPredicted RBP20.49■□□□□ 0.87
SNRPB-203ENST00000474384 FOXD4L4Q8WXT5 416 aaPredicted RBP20.49■□□□□ 0.87
SNRPB-203ENST00000474384 TMEM60Q9H2L4 133 aa20.49■□□□□ 0.87
SNRPB-203ENST00000474384 STARD7Q9NQZ5 370 aa20.49■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms