RNA–Protein interactions for RNA: ENST00000474025.1

SNRNP40-204, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

TSL 3

Gene SNRNP40, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-204ENST00000474025 MRPL12P52815 198 aaKnown RBP6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 HTRA4P83105 476 aaPredicted RBP6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 ZP2Q05996 745 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 PTK7Q13308 1070 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 IKBKEQ14164 716 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 HIC1Q14526 733 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 COL19A1Q14993 1142 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 ALX1Q15699 326 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 DGKDQ16760 1214 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 USH1GQ495M9 461 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 TIGD5Q53EQ6 642 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 ZNF618Q5T7W0 954 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 LIN28BQ6ZN17 250 aaKnown RBP eCLIP6.02□□□□□ -1.452e-16■■■■■ 31
SNRNP40-204ENST00000474025 SEPT14Q6ZU15 432 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 CHST3Q7LGC8 479 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 C7orf31Q8N865 590 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 RGS22Q8NE09 1264 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 SYTL5Q8TDW5 730 aaPredicted RBP6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 EMID1Q96A84 441 aaPredicted RBP6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 PABPC5Q96DU9 382 aaKnown RBP6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 CRBNQ96SW2 442 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 COL20A1Q9P218 1284 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 INSL6Q9Y581 213 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 GTF3C3Q9Y5Q9 886 aa6.02□□□□□ -1.45
SNRNP40-204ENST00000474025 MICAL3Q7RTP6 2002 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 FGAP02671 866 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 GOLGA8HP0CJ92 632 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 ZNF200P98182 395 aaPredicted RBP6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 STXBP2Q15833 593 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 KIAA0753Q2KHM9 967 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 EPC2Q52LR7 807 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 PLEKHG4Q58EX7 1191 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 RRP12Q5JTH9 1297 aaKnown RBP6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 GPATCH4Q5T3I0 446 aaKnown RBP6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 MYOCDQ8IZQ8 938 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 BANK1Q8NDB2 785 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 DBF4BQ8NFT6 615 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 PPTC7Q8NI37 304 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 NSUN6Q8TEA1 469 aaKnown RBP6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 TBC1D5Q92609 795 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 FBXL18Q96ME1 805 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 TTC14Q96N46 770 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 SAMD11Q96NU1 681 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 TAAR1Q96RJ0 339 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 IWS1Q96ST2 819 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 KCNK17Q96T54 332 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 RMDN3Q96TC7 470 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 KATNAL1Q9BW62 490 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 MAF1Q9H063 256 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 CPVLQ9H3G5 476 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 TOMM22Q9NS69 142 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 PRKAG3Q9UGI9 489 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 CTNNA3Q9UI47 895 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 DDX41Q9UJV9 622 aaKnown RBP6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 RCAN3Q9UKA8 241 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 VPS9D1Q9Y2B5 631 aa6.01□□□□□ -1.45
SNRNP40-204ENST00000474025 ZMYM6O95789 1325 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 EMSYQ7Z589 1322 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 SALL3Q9BXA9 1300 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 TECTAO75443 2155 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 KIAA1217Q5T5P2 1943 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 A0A0D9SFI3 127 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 H3BNC9 293 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 AMHP03971 560 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 EIF2AK2P19525 551 aaKnown RBP6□□□□□ -1.45
SNRNP40-204ENST00000474025 MX1P20591 662 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 HOXC8P31273 242 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 LTBRP36941 435 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 THPOP40225 353 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 PTPN5P54829 565 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 HAND2P61296 217 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 LAMC2Q13753 1193 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 CDC37Q16543 378 aaPredicted RBP6□□□□□ -1.45
SNRNP40-204ENST00000474025 PTPROQ16827 1216 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 TCEAL5Q5H9L2 206 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 HFE2Q6ZVN8 426 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 ERMP1Q7Z2K6 904 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 SERINC5Q86VE9 423 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 FBXO11Q86XK2 927 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 TBC1D10CQ8IV04 446 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 ADHFE1Q8IWW8 467 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 DHX37Q8IY37 1157 aaKnown RBP6□□□□□ -1.45
SNRNP40-204ENST00000474025 ANKS1AQ92625 1134 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 ALG1Q9BT22 464 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 UBA5Q9GZZ9 404 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 NSUN3Q9H649 340 aaKnown RBP6□□□□□ -1.45
SNRNP40-204ENST00000474025 PXMP2Q9NR77 195 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 MRVI1Q9Y6F6 885 aa6□□□□□ -1.45
SNRNP40-204ENST00000474025 ABCB11O95342 1321 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 NEDD4P46934 1319 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 LOC101059915A0A1B0GWI6 518 aaPredicted RBP5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 RSPH10B2B2RC85 870 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 OPLAHO14841 1288 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 PPFIA4O75335 1185 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 EIF3JO75822 258 aaKnown RBP5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 RGS20O76081 388 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 NR3C2P08235 984 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 LINC00271P0C7V0 271 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 RSPH10BP0C881 870 aa5.99□□□□□ -1.45
SNRNP40-204ENST00000474025 HSPD1P10809 573 aaKnown RBP5.99□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms