RNA–Protein interactions for RNA: ENST00000473924.1

DDX56-209, Transcript of DEAD-box helicase 56, humanhuman

TSL 5

Gene DDX56, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-209ENST00000473924 METTL7BQ6UX53 244 aa14.1□□□□□ -0.15
DDX56-209ENST00000473924 NEK8Q86SG6 692 aa14.1□□□□□ -0.15
DDX56-209ENST00000473924 PPTC7Q8NI37 304 aa14.1□□□□□ -0.15
DDX56-209ENST00000473924 DPF3Q92784 378 aa14.1□□□□□ -0.15
DDX56-209ENST00000473924 NAP1L4Q99733 375 aaKnown RBP14.1□□□□□ -0.15
DDX56-209ENST00000473924 SDF4Q9BRK5 362 aa14.1□□□□□ -0.15
DDX56-209ENST00000473924 ZNF577Q9BSK1 485 aa14.1□□□□□ -0.15
DDX56-209ENST00000473924 IGLV3-22A0A075B6J6 115 aa14.09□□□□□ -0.15
DDX56-209ENST00000473924 CCNT1O60563 726 aaKnown RBP14.09□□□□□ -0.15
DDX56-209ENST00000473924 TDP2O95551 362 aa14.09□□□□□ -0.15
DDX56-209ENST00000473924 KCNA2P16389 499 aa14.09□□□□□ -0.15
DDX56-209ENST00000473924 PURAQ00577 322 aaKnown RBP14.09□□□□□ -0.15
DDX56-209ENST00000473924 HSDL1Q3SXM5 330 aa14.09□□□□□ -0.15
DDX56-209ENST00000473924 EARS2Q5JPH6 523 aaKnown RBP14.09□□□□□ -0.15
DDX56-209ENST00000473924 MCTP1Q6DN14 999 aa14.09□□□□□ -0.15
DDX56-209ENST00000473924 SLC39A5Q6ZMH5 540 aa14.09□□□□□ -0.15
DDX56-209ENST00000473924 TNFRSF25Q93038 417 aa14.09□□□□□ -0.15
DDX56-209ENST00000473924 INTS4Q96HW7 963 aaKnown RBP14.09□□□□□ -0.15
DDX56-209ENST00000473924 FOXP1Q9H334 677 aaPredicted RBP14.09□□□□□ -0.15
DDX56-209ENST00000473924 BCAS3Q9H6U6 928 aa14.09□□□□□ -0.15
DDX56-209ENST00000473924 AGO4Q9HCK5 861 aaKnown RBP14.09□□□□□ -0.15
DDX56-209ENST00000473924 TCEAL9Q9UHQ7 104 aa14.09□□□□□ -0.15
DDX56-209ENST00000473924 ELP1O95163 1332 aa14.09□□□□□ -0.15
DDX56-209ENST00000473924 FAM205CA6NFA0 338 aa14.08□□□□□ -0.16
DDX56-209ENST00000473924 IPO5O00410 1097 aaKnown RBP14.08□□□□□ -0.16
DDX56-209ENST00000473924 GCFC2P16383 781 aaKnown RBP14.08□□□□□ -0.16
DDX56-209ENST00000473924 PDCP20941 246 aa14.08□□□□□ -0.16
DDX56-209ENST00000473924 CHMP4BP1P59074 171 aa14.08□□□□□ -0.16
DDX56-209ENST00000473924 MOXD1Q6UVY6 613 aa14.08□□□□□ -0.16
DDX56-209ENST00000473924 UIMC1Q96RL1 719 aa14.08□□□□□ -0.16
DDX56-209ENST00000473924 MTG1Q9BT17 334 aaPredicted RBP14.08□□□□□ -0.16
DDX56-209ENST00000473924 JPH1Q9HDC5 661 aaPredicted RBP14.08□□□□□ -0.16
DDX56-209ENST00000473924 SLC9A2Q9UBY0 812 aa14.08□□□□□ -0.16
DDX56-209ENST00000473924 DDX25Q9UHL0 483 aaKnown RBP14.08□□□□□ -0.16
DDX56-209ENST00000473924 CYP3A7-CYP3A51PA0A087WV96 503 aa14.07□□□□□ -0.16
DDX56-209ENST00000473924 A0A0U1RQG5 324 aaPredicted RBP14.07□□□□□ -0.16
DDX56-209ENST00000473924 DDX39AO00148 427 aaKnown RBP14.07□□□□□ -0.16
DDX56-209ENST00000473924 EDIL3O43854 480 aa14.07□□□□□ -0.16
DDX56-209ENST00000473924 MARCH6O60337 910 aa14.07□□□□□ -0.16
DDX56-209ENST00000473924 EVI5O60447 810 aa14.07□□□□□ -0.16
DDX56-209ENST00000473924 PPFIA4O75335 1185 aa14.07□□□□□ -0.16
DDX56-209ENST00000473924 CYP3A7P24462 503 aa14.07□□□□□ -0.16
DDX56-209ENST00000473924 LRRC26Q2I0M4 334 aa14.07□□□□□ -0.16
DDX56-209ENST00000473924 Q4G0T1 1027 aa14.07□□□□□ -0.16
DDX56-209ENST00000473924 PPP4R3AQ6IN85 833 aa14.07□□□□□ -0.16
DDX56-209ENST00000473924 NOSTRINQ8IVI9 506 aa14.07□□□□□ -0.16
DDX56-209ENST00000473924 GPR20Q99678 358 aa14.07□□□□□ -0.16
DDX56-209ENST00000473924 TBC1D22BQ9NU19 505 aa14.07□□□□□ -0.16
DDX56-209ENST00000473924 ATP11BQ9Y2G3 1177 aa14.07□□□□□ -0.16
DDX56-209ENST00000473924 DOCK5Q9H7D0 1870 aa14.07□□□□□ -0.16
DDX56-209ENST00000473924 NFASCO94856 1347 aa14.07□□□□□ -0.16
DDX56-209ENST00000473924 MSH4O15457 936 aa14.06□□□□□ -0.16
DDX56-209ENST00000473924 ZNF286BP0CG31 522 aa14.06□□□□□ -0.16
DDX56-209ENST00000473924 ATP2B1P20020 1258 aa14.06□□□□□ -0.16
DDX56-209ENST00000473924 RTP1P59025 263 aa14.06□□□□□ -0.16
DDX56-209ENST00000473924 PSMC6P62333 389 aa14.06□□□□□ -0.16
DDX56-209ENST00000473924 ITGB3BPQ13352 177 aaPredicted RBP14.06□□□□□ -0.16
DDX56-209ENST00000473924 ITGA7Q13683 1181 aa14.06□□□□□ -0.16
DDX56-209ENST00000473924 UTP14CQ5TAP6 766 aaKnown RBP14.06□□□□□ -0.16
DDX56-209ENST00000473924 SEPT1Q8WYJ6 367 aa14.06□□□□□ -0.16
DDX56-209ENST00000473924 LENG9Q96B70 501 aa14.06□□□□□ -0.16
DDX56-209ENST00000473924 KATNAL1Q9BW62 490 aa14.06□□□□□ -0.16
DDX56-209ENST00000473924 NOL7Q9UMY1 257 aaKnown RBP14.06□□□□□ -0.16
DDX56-209ENST00000473924 VPS37CA5D8V6 355 aaPredicted RBP14.05□□□□□ -0.16
DDX56-209ENST00000473924 KIF28PB7ZC32 967 aa14.05□□□□□ -0.16
DDX56-209ENST00000473924 ARVCFO00192 962 aa14.05□□□□□ -0.16
DDX56-209ENST00000473924 SLC37A4O43826 429 aa14.05□□□□□ -0.16
DDX56-209ENST00000473924 GAS7O60861 476 aa14.05□□□□□ -0.16
DDX56-209ENST00000473924 U2AF2P26368 475 aaKnown RBP eCLIP14.05□□□□□ -0.16
DDX56-209ENST00000473924 TCF7P36402 384 aaPredicted RBP14.05□□□□□ -0.16
DDX56-209ENST00000473924 TRIM60Q495X7 471 aa14.05□□□□□ -0.16
DDX56-209ENST00000473924 FAM47CQ5HY64 1035 aa14.05□□□□□ -0.16
DDX56-209ENST00000473924 C1orf53Q5VUE5 145 aa14.05□□□□□ -0.16
DDX56-209ENST00000473924 LRCH2Q5VUJ6 765 aa14.05□□□□□ -0.16
DDX56-209ENST00000473924 SPRYD3Q8NCJ5 442 aa14.05□□□□□ -0.16
DDX56-209ENST00000473924 MBOAT7Q96N66 472 aa14.05□□□□□ -0.16
DDX56-209ENST00000473924 MROH7Q68CQ1 1323 aa14.05□□□□□ -0.16
DDX56-209ENST00000473924 GSTTP1A0A1W2PQM5 241 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 DCDC2CA8MYV0 355 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 DHX15O43143 795 aaKnown RBP14.04□□□□□ -0.16
DDX56-209ENST00000473924 PQBP1O60828 265 aaKnown RBP14.04□□□□□ -0.16
DDX56-209ENST00000473924 BAG4O95429 457 aaKnown RBP14.04□□□□□ -0.16
DDX56-209ENST00000473924 LGALS2P05162 132 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 HOXD8P13378 290 aaPredicted RBP14.04□□□□□ -0.16
DDX56-209ENST00000473924 PSEN2P49810 448 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 ACTR2P61160 394 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 KRT76Q01546 638 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 BECN1Q14457 450 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 MFSD10Q14728 455 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 SNX17Q15036 470 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 NBPF20Q3BBV1 942 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 C7orf61Q8IZ16 206 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 GLG1Q92896 1179 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 SLC5A5Q92911 643 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 RIT2Q99578 217 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 TEKT3Q9BXF9 490 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 SEZ6LQ9BYH1 1024 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 AZI2Q9H6S1 392 aa14.04□□□□□ -0.16
DDX56-209ENST00000473924 ZNF215Q9UL58 517 aaPredicted RBP14.04□□□□□ -0.16
DDX56-209ENST00000473924 TELO2Q9Y4R8 837 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms