RNA–Protein interactions for RNA: ENST00000473602.1

SHROOM3-204, Transcript of shroom family member 3, humanhuman

TSL 3

Gene SHROOM3, Length 789 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM3-204ENST00000473602 COG5Q9UP83 839 aa14.9□□□□□ -0.02
SHROOM3-204ENST00000473602 MRVI1Q9Y6F6 885 aa14.9□□□□□ -0.02
SHROOM3-204ENST00000473602 MEIS2O14770 477 aa14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 TLL1O43897 1013 aa14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 ARHGEF15O94989 841 aa14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 MYL3P08590 195 aa14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 MYCLP12524 364 aaPredicted RBP14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 ACTN1P12814 892 aa14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 EVCP57679 992 aa14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 TAP1Q03518 808 aa14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 APOBRQ0VD83 1088 aa14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 GNPTABQ3T906 1256 aa14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 XRRA1Q6P2D8 792 aa14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 PHOSPHO2Q8TCD6 241 aa14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 PSTPIP2Q9H939 334 aa14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 FAM217BQ9NTX9 383 aaPredicted RBP14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 DDX41Q9UJV9 622 aaKnown RBP14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 NAP1L2Q9ULW6 460 aaPredicted RBP14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 CYP46A1Q9Y6A2 500 aa14.89□□□□□ -0.03
SHROOM3-204ENST00000473602 IQCF3P0C7M6 154 aa14.88□□□□□ -0.03
SHROOM3-204ENST00000473602 CDC27P30260 824 aa14.88□□□□□ -0.03
SHROOM3-204ENST00000473602 ARHGAP1Q07960 439 aa14.88□□□□□ -0.03
SHROOM3-204ENST00000473602 LAMC2Q13753 1193 aa14.88□□□□□ -0.03
SHROOM3-204ENST00000473602 LY6KQ17RY6 165 aa14.88□□□□□ -0.03
SHROOM3-204ENST00000473602 FAM47CQ5HY64 1035 aa14.88□□□□□ -0.03
SHROOM3-204ENST00000473602 USP17L6PQ6QN14 398 aa14.88□□□□□ -0.03
SHROOM3-204ENST00000473602 HEATR3Q7Z4Q2 680 aa14.88□□□□□ -0.03
SHROOM3-204ENST00000473602 IL31RAQ8NI17 732 aa14.88□□□□□ -0.03
SHROOM3-204ENST00000473602 PPP1R13LQ8WUF5 828 aa14.88□□□□□ -0.03
SHROOM3-204ENST00000473602 COPS5Q92905 334 aa14.88□□□□□ -0.03
SHROOM3-204ENST00000473602 SLC9A7Q96T83 725 aa14.88□□□□□ -0.03
SHROOM3-204ENST00000473602 MTG1Q9BT17 334 aaPredicted RBP14.88□□□□□ -0.03
SHROOM3-204ENST00000473602 FTOQ9C0B1 505 aaKnown RBP eCLIP14.88□□□□□ -0.03
SHROOM3-204ENST00000473602 HCN4Q9Y3Q4 1203 aa14.88□□□□□ -0.03
SHROOM3-204ENST00000473602 hCG_1642624A0A1W2PR95 340 aa14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 KIF28PB7ZC32 967 aa14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 RGS20O76081 388 aa14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 RFC2P35250 354 aa14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 ANAPC15P60006 121 aa14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 NBPF20Q3BBV1 942 aa14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 TMEM31Q5JXX7 168 aa14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 PCNX4Q63HM2 1172 aa14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 WWC2Q6AWC2 1192 aa14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 HERC6Q8IVU3 1022 aa14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 RETREG2Q8NC44 543 aa14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 GPKOWQ92917 476 aaPredicted RBP eCLIP14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 HLA-CQ95604 372 aa14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 INPP4AQ96PE3 977 aaPredicted RBP14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 GLT8D2Q9H1C3 349 aa14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 ARIH1Q9Y4X5 557 aaPredicted RBP14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 V9GY48 417 aaPredicted RBP14.87□□□□□ -0.03
SHROOM3-204ENST00000473602 SPDYE3A6NKU9 549 aa14.86□□□□□ -0.03
SHROOM3-204ENST00000473602 MMP3P08254 477 aa14.86□□□□□ -0.03
SHROOM3-204ENST00000473602 ICAM3P32942 547 aa14.86□□□□□ -0.03
SHROOM3-204ENST00000473602 ADD1P35611 737 aaKnown RBP14.86□□□□□ -0.03
SHROOM3-204ENST00000473602 NAPAP54920 295 aa14.86□□□□□ -0.03
SHROOM3-204ENST00000473602 GRB10Q13322 594 aa14.86□□□□□ -0.03
SHROOM3-204ENST00000473602 DHX37Q8IY37 1157 aaKnown RBP14.86□□□□□ -0.03
SHROOM3-204ENST00000473602 PPTC7Q8NI37 304 aa14.86□□□□□ -0.03
SHROOM3-204ENST00000473602 AFG1LQ8WV93 481 aa14.86□□□□□ -0.03
SHROOM3-204ENST00000473602 KHSRPQ92945 711 aaKnown RBP eCLIP14.86□□□□□ -0.03
SHROOM3-204ENST00000473602 EHMT1Q9H9B1 1298 aa14.86□□□□□ -0.03
SHROOM3-204ENST00000473602 BARHL2Q9NY43 387 aa14.86□□□□□ -0.03
SHROOM3-204ENST00000473602 GBF1Q92538 1859 aa14.86□□□□□ -0.03
SHROOM3-204ENST00000473602 PITPNM1O00562 1244 aa14.85□□□□□ -0.03
SHROOM3-204ENST00000473602 FIBPO43427 364 aa14.85□□□□□ -0.03
SHROOM3-204ENST00000473602 LPXNO60711 386 aa14.85□□□□□ -0.03
SHROOM3-204ENST00000473602 PDIA3P30101 505 aaKnown RBP14.85□□□□□ -0.03
SHROOM3-204ENST00000473602 MRPS9P82933 396 aaKnown RBP14.85□□□□□ -0.03
SHROOM3-204ENST00000473602 PTPN11Q06124 597 aaPredicted RBP14.85□□□□□ -0.03
SHROOM3-204ENST00000473602 TOB2Q14106 344 aaPredicted RBP14.85□□□□□ -0.03
SHROOM3-204ENST00000473602 DGKDQ16760 1214 aa14.85□□□□□ -0.03
SHROOM3-204ENST00000473602 PFKFB3Q16875 520 aaPredicted RBP14.85□□□□□ -0.03
SHROOM3-204ENST00000473602 CELF3Q5SZQ8 465 aaKnown RBP14.85□□□□□ -0.03
SHROOM3-204ENST00000473602 NFRKBQ6P4R8 1299 aa14.85□□□□□ -0.03
SHROOM3-204ENST00000473602 SPRED2Q7Z698 418 aa14.85□□□□□ -0.03
SHROOM3-204ENST00000473602 RNF26Q9BY78 433 aaPredicted RBP14.85□□□□□ -0.03
SHROOM3-204ENST00000473602 RIC8AQ9NPQ8 531 aa14.85□□□□□ -0.03
SHROOM3-204ENST00000473602 DOCK5Q9H7D0 1870 aa14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 SPATA31C2B4DYI2 1134 aa14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 STXBP3O00186 592 aa14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 PRPF3O43395 683 aaKnown RBP14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 GGPS1O95749 300 aa14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 FOSP01100 380 aaPredicted RBP14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 HOXD8P13378 290 aaPredicted RBP14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 SCG2P13521 617 aa14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 UBA1P22314 1058 aaKnown RBP14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 ADCY7P51828 1080 aa14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 NEDD9Q14511 834 aa14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 MYSM1Q5VVJ2 828 aa14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 TYW1BQ6NUM6 668 aa14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 NLRX1Q86UT6 975 aa14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 CCDC12Q8WUD4 166 aaPredicted RBP14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 IL17RAQ96F46 866 aa14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 ZNF274Q96GC6 653 aaPredicted RBP14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 CDHR1Q96JP9 859 aa14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 KATNAL1Q9BW62 490 aa14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 UPF3BQ9BZI7 483 aaKnown RBP14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 C11orf16Q9NQ32 467 aa14.84□□□□□ -0.03
SHROOM3-204ENST00000473602 PIEZO1Q92508 2521 aa14.83□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms