RNA–Protein interactions for RNA: ENST00000472959.5

TOP3A-204, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 3

Gene TOP3A, Length 913 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-204ENST00000472959 HOXD8P13378 290 aaPredicted RBP23.6■■□□□ 1.37
TOP3A-204ENST00000472959 GCFC2P16383 781 aaKnown RBP23.6■■□□□ 1.37
TOP3A-204ENST00000472959 MLLT1Q03111 559 aaPredicted RBP23.6■■□□□ 1.37
TOP3A-204ENST00000472959 Q4G0T1 1027 aa23.6■■□□□ 1.37
TOP3A-204ENST00000472959 LARP1BQ659C4 914 aaKnown RBP23.6■■□□□ 1.37
TOP3A-204ENST00000472959 CXCL17Q6UXB2 119 aa23.6■■□□□ 1.37
TOP3A-204ENST00000472959 MBOAT7Q96N66 472 aa23.6■■□□□ 1.37
TOP3A-204ENST00000472959 SDF4Q9BRK5 362 aa23.6■■□□□ 1.37
TOP3A-204ENST00000472959 STARD7Q9NQZ5 370 aa23.6■■□□□ 1.37
TOP3A-204ENST00000472959 H3BQV1 296 aa23.59■■□□□ 1.37
TOP3A-204ENST00000472959 NOP56O00567 594 aaKnown RBP23.59■■□□□ 1.37
TOP3A-204ENST00000472959 MYL3P08590 195 aa23.59■■□□□ 1.37
TOP3A-204ENST00000472959 PDCP20941 246 aa23.59■■□□□ 1.37
TOP3A-204ENST00000472959 PURAQ00577 322 aaKnown RBP23.59■■□□□ 1.37
TOP3A-204ENST00000472959 GNL2Q13823 731 aaKnown RBP23.59■■□□□ 1.37
TOP3A-204ENST00000472959 LETM2Q2VYF4 491 aa23.59■■□□□ 1.37
TOP3A-204ENST00000472959 HSDL1Q3SXM5 330 aa23.59■■□□□ 1.37
TOP3A-204ENST00000472959 EARS2Q5JPH6 523 aaKnown RBP23.59■■□□□ 1.37
TOP3A-204ENST00000472959 PPP4R3AQ6IN85 833 aa23.59■■□□□ 1.37
TOP3A-204ENST00000472959 VTI1AQ96AJ9 217 aa23.59■■□□□ 1.37
TOP3A-204ENST00000472959 LENG9Q96B70 501 aa23.59■■□□□ 1.37
TOP3A-204ENST00000472959 MTG1Q9BT17 334 aaPredicted RBP23.59■■□□□ 1.37
TOP3A-204ENST00000472959 BCAS3Q9H6U6 928 aa23.59■■□□□ 1.37
TOP3A-204ENST00000472959 PKD2L1Q9P0L9 805 aa23.59■■□□□ 1.37
TOP3A-204ENST00000472959 IPO5O00410 1097 aaKnown RBP23.58■■□□□ 1.37
TOP3A-204ENST00000472959 SORBS3O60504 671 aa23.58■■□□□ 1.37
TOP3A-204ENST00000472959 C1orf53Q5VUE5 145 aa23.58■■□□□ 1.37
TOP3A-204ENST00000472959 SLC39A5Q6ZMH5 540 aa23.58■■□□□ 1.37
TOP3A-204ENST00000472959 ZNF577Q9BSK1 485 aa23.58■■□□□ 1.37
TOP3A-204ENST00000472959 SEZ6LQ9BYH1 1024 aa23.58■■□□□ 1.37
TOP3A-204ENST00000472959 JPH1Q9HDC5 661 aaPredicted RBP23.58■■□□□ 1.37
TOP3A-204ENST00000472959 TBC1D22BQ9NU19 505 aa23.58■■□□□ 1.37
TOP3A-204ENST00000472959 TDP2O95551 362 aa23.57■■□□□ 1.36
TOP3A-204ENST00000472959 U2AF2P26368 475 aaKnown RBP eCLIP23.57■■□□□ 1.36
TOP3A-204ENST00000472959 ITGB3BPQ13352 177 aaPredicted RBP23.57■■□□□ 1.36
TOP3A-204ENST00000472959 SNX17Q15036 470 aa23.57■■□□□ 1.36
TOP3A-204ENST00000472959 NOSTRINQ8IVI9 506 aa23.57■■□□□ 1.36
TOP3A-204ENST00000472959 GPR20Q99678 358 aa23.57■■□□□ 1.36
TOP3A-204ENST00000472959 SLC9A2Q9UBY0 812 aa23.57■■□□□ 1.36
TOP3A-204ENST00000472959 DDX25Q9UHL0 483 aaKnown RBP23.57■■□□□ 1.36
TOP3A-204ENST00000472959 A0A0U1RQG5 324 aaPredicted RBP23.56■■□□□ 1.36
TOP3A-204ENST00000472959 FAM205CA6NFA0 338 aa23.56■■□□□ 1.36
TOP3A-204ENST00000472959 ATN1P54259 1190 aaPredicted RBP23.56■■□□□ 1.36
TOP3A-204ENST00000472959 MSH4O15457 936 aa23.55■■□□□ 1.36
TOP3A-204ENST00000472959 DHX15O43143 795 aaKnown RBP23.55■■□□□ 1.36
TOP3A-204ENST00000472959 CCNT1O60563 726 aaKnown RBP23.55■■□□□ 1.36
TOP3A-204ENST00000472959 HSP90AA1P07900 732 aaKnown RBP23.55■■□□□ 1.36
TOP3A-204ENST00000472959 LRRC26Q2I0M4 334 aa23.55■■□□□ 1.36
TOP3A-204ENST00000472959 SEPT1Q8WYJ6 367 aa23.55■■□□□ 1.36
TOP3A-204ENST00000472959 RIT2Q99578 217 aa23.55■■□□□ 1.36
TOP3A-204ENST00000472959 TRAPPC10P48553 1259 aa23.54■■□□□ 1.36
TOP3A-204ENST00000472959 SP4Q02446 784 aa23.54■■□□□ 1.36
TOP3A-204ENST00000472959 MCTP1Q6DN14 999 aa23.54■■□□□ 1.36
TOP3A-204ENST00000472959 DPF3Q92784 378 aa23.54■■□□□ 1.36
TOP3A-204ENST00000472959 SLC5A5Q92911 643 aa23.54■■□□□ 1.36
TOP3A-204ENST00000472959 KATNAL1Q9BW62 490 aa23.54■■□□□ 1.36
TOP3A-204ENST00000472959 TCEAL9Q9UHQ7 104 aa23.54■■□□□ 1.36
TOP3A-204ENST00000472959 MYH7BA7E2Y1 1941 aa23.53■■□□□ 1.36
TOP3A-204ENST00000472959 KIF28PB7ZC32 967 aa23.53■■□□□ 1.36
TOP3A-204ENST00000472959 ARVCFO00192 962 aa23.53■■□□□ 1.36
TOP3A-204ENST00000472959 ITGA7Q13683 1181 aa23.53■■□□□ 1.36
TOP3A-204ENST00000472959 SLC43A3Q8NBI5 491 aa23.53■■□□□ 1.36
TOP3A-204ENST00000472959 FAM20AQ96MK3 541 aa23.53■■□□□ 1.36
TOP3A-204ENST00000472959 FOXD4L1Q9NU39 408 aa23.53■■□□□ 1.36
TOP3A-204ENST00000472959 NOL7Q9UMY1 257 aaKnown RBP23.53■■□□□ 1.36
TOP3A-204ENST00000472959 GSTTP1A0A1W2PQM5 241 aa23.52■■□□□ 1.36
TOP3A-204ENST00000472959 TBX3O15119 743 aa23.52■■□□□ 1.36
TOP3A-204ENST00000472959 SLC37A4O43826 429 aa23.52■■□□□ 1.36
TOP3A-204ENST00000472959 EVI5O60447 810 aa23.52■■□□□ 1.36
TOP3A-204ENST00000472959 F2P00734 622 aa23.52■■□□□ 1.36
TOP3A-204ENST00000472959 CDK7P50613 346 aa23.52■■□□□ 1.36
TOP3A-204ENST00000472959 RTP1P59025 263 aa23.52■■□□□ 1.36
TOP3A-204ENST00000472959 ACTR2P61160 394 aa23.52■■□□□ 1.36
TOP3A-204ENST00000472959 KRT76Q01546 638 aa23.52■■□□□ 1.36
TOP3A-204ENST00000472959 ETNPPLQ8TBG4 499 aa23.52■■□□□ 1.36
TOP3A-204ENST00000472959 KAT2BQ92831 832 aa23.52■■□□□ 1.36
TOP3A-204ENST00000472959 C16orf70Q9BSU1 422 aa23.52■■□□□ 1.36
TOP3A-204ENST00000472959 KCNMB3Q9NPA1 279 aa23.52■■□□□ 1.36
TOP3A-204ENST00000472959 MROH7Q68CQ1 1323 aa23.52■■□□□ 1.36
TOP3A-204ENST00000472959 GAS7O60861 476 aa23.51■■□□□ 1.35
TOP3A-204ENST00000472959 LGALS2P05162 132 aa23.51■■□□□ 1.35
TOP3A-204ENST00000472959 ZNF286BP0CG31 522 aa23.51■■□□□ 1.35
TOP3A-204ENST00000472959 TCF7P36402 384 aaPredicted RBP23.51■■□□□ 1.35
TOP3A-204ENST00000472959 PSMC6P62333 389 aa23.51■■□□□ 1.35
TOP3A-204ENST00000472959 ORC2Q13416 577 aaPredicted RBP23.51■■□□□ 1.35
TOP3A-204ENST00000472959 LRCH2Q5VUJ6 765 aa23.51■■□□□ 1.35
TOP3A-204ENST00000472959 ZNF746Q6NUN9 644 aaPredicted RBP23.51■■□□□ 1.35
TOP3A-204ENST00000472959 NFRKBQ6P4R8 1299 aa23.51■■□□□ 1.35
TOP3A-204ENST00000472959 ANKRD33Q7Z3H0 272 aa23.51■■□□□ 1.35
TOP3A-204ENST00000472959 TOX2Q96NM4 488 aa23.51■■□□□ 1.35
TOP3A-204ENST00000472959 UIMC1Q96RL1 719 aa23.51■■□□□ 1.35
TOP3A-204ENST00000472959 TELO2Q9Y4R8 837 aa23.51■■□□□ 1.35
TOP3A-204ENST00000472959 GRIN2DO15399 1336 aa23.51■■□□□ 1.35
TOP3A-204ENST00000472959 H3BRB1 525 aa23.5■■□□□ 1.35
TOP3A-204ENST00000472959 DDX39AO00148 427 aaKnown RBP23.5■■□□□ 1.35
TOP3A-204ENST00000472959 ATG7O95352 703 aa23.5■■□□□ 1.35
TOP3A-204ENST00000472959 CCNE2O96020 404 aa23.5■■□□□ 1.35
TOP3A-204ENST00000472959 PDIA4P13667 645 aaKnown RBP23.5■■□□□ 1.35
TOP3A-204ENST00000472959 SYT1P21579 422 aa23.5■■□□□ 1.35
TOP3A-204ENST00000472959 PSEN2P49810 448 aa23.5■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms