RNA–Protein interactions for RNA: ENST00000472896.5

APTX-216, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,759 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-216ENST00000472896 TTC39AQ5SRH9 613 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 EMBQ6PCB8 327 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 KDM7AQ6ZMT4 941 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 APTXQ7Z2E3 356 aaKnown RBP11.18□□□□□ -0.62
APTX-216ENST00000472896 GUCD1Q96NT3 240 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 HMX1Q9NP08 348 aaPredicted RBP11.18□□□□□ -0.62
APTX-216ENST00000472896 OGDHLQ9ULD0 1010 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 AGTPBP1Q9UPW5 1226 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 SAMM50Q9Y512 469 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 PFASO15067 1338 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 RPTORQ8N122 1335 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 PHIPQ8WWQ0 1821 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 ANKRD33BA6NCL7 494 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 CPLX1O14810 134 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 CDKL5O76039 1030 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 HMGCRP04035 888 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 RCSD1Q6JBY9 416 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 ZNF572Q7Z3I7 529 aaPredicted RBP11.18□□□□□ -0.62
APTX-216ENST00000472896 KRI1Q8N9T8 703 aaKnown RBP11.18□□□□□ -0.62
APTX-216ENST00000472896 KBTBD3Q8NAB2 608 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 ACRBPQ8NEB7 543 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 P3H4Q92791 437 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 CAVIN3Q969G5 261 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 MMS19Q96T76 1030 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 MAP3K14Q99558 947 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 IDI2Q9BXS1 227 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 DDX4Q9NQI0 724 aaKnown RBP11.18□□□□□ -0.62
APTX-216ENST00000472896 PTPRFP10586 1907 aa11.18□□□□□ -0.62
APTX-216ENST00000472896 PEX10O60683 326 aa11.17□□□□□ -0.62
APTX-216ENST00000472896 CTNND1O60716 968 aaKnown RBP11.17□□□□□ -0.62
APTX-216ENST00000472896 ENTPD3O75355 529 aa11.17□□□□□ -0.62
APTX-216ENST00000472896 LDHBP07195 334 aaKnown RBP11.17□□□□□ -0.62
APTX-216ENST00000472896 CASP14P31944 242 aa11.17□□□□□ -0.62
APTX-216ENST00000472896 RFX5P48382 616 aaPredicted RBP11.17□□□□□ -0.62
APTX-216ENST00000472896 CLNS1AP54105 237 aaKnown RBP11.17□□□□□ -0.62
APTX-216ENST00000472896 EPHB4P54760 987 aa11.17□□□□□ -0.62
APTX-216ENST00000472896 SPAG1Q07617 926 aa11.17□□□□□ -0.62
APTX-216ENST00000472896 FAM110CQ1W6H9 321 aa11.17□□□□□ -0.62
APTX-216ENST00000472896 CDKAL1Q5VV42 579 aa11.17□□□□□ -0.62
APTX-216ENST00000472896 TLDC1Q6P9B6 456 aa11.17□□□□□ -0.62
APTX-216ENST00000472896 CCDC129Q6ZRS4 1044 aa11.17□□□□□ -0.62
APTX-216ENST00000472896 PARP9Q8IXQ6 854 aa11.17□□□□□ -0.62
APTX-216ENST00000472896 MAB21L3Q8N8X9 362 aa11.17□□□□□ -0.62
APTX-216ENST00000472896 ZNF579Q8NAF0 562 aaKnown RBP11.17□□□□□ -0.62
APTX-216ENST00000472896 ARMC2Q8NEN0 867 aa11.17□□□□□ -0.62
APTX-216ENST00000472896 SPATA20Q8TB22 786 aa11.17□□□□□ -0.62
APTX-216ENST00000472896 SLC40A1Q9NP59 571 aa11.17□□□□□ -0.62
APTX-216ENST00000472896 SAMSN1Q9NSI8 373 aaKnown RBP11.17□□□□□ -0.62
APTX-216ENST00000472896 ABHD10Q9NUJ1 306 aa11.17□□□□□ -0.62
APTX-216ENST00000472896 DDX60LQ5H9U9 1706 aaKnown RBP11.17□□□□□ -0.62
APTX-216ENST00000472896 A0A0U1RQJ8 604 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 TEX33O43247 280 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 GYPCP04921 128 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 SLC5A1P13866 664 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 SSR1P43307 286 aaKnown RBP11.16□□□□□ -0.62
APTX-216ENST00000472896 ERVK-24P63145 666 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 KRT83P78385 493 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 SLMAPQ14BN4 828 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 LRRC26Q2I0M4 334 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 NAA35Q5VZE5 725 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 ATG9AQ7Z3C6 839 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 KIAA1328Q86T90 577 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 ZSCAN29Q8IWY8 852 aaPredicted RBP11.16□□□□□ -0.62
APTX-216ENST00000472896 CCDC13Q8IYE1 715 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 RNF217Q8TC41 542 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 ZNF473Q8WTR7 871 aaKnown RBP11.16□□□□□ -0.62
APTX-216ENST00000472896 ATRIPQ8WXE1 791 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 TRIB2Q92519 343 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 LPIN2Q92539 896 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 FAM161BQ96MY7 647 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 FAM196BA6NMK8 535 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 EYA2O00167 538 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 COL6A1P12109 1028 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 CYP2B6P20813 491 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 PAX7P23759 505 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 SPP2Q13103 211 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 RRP1BQ14684 758 aaKnown RBP11.16□□□□□ -0.62
APTX-216ENST00000472896 TNNI3KQ59H18 835 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 SLC9C2Q5TAH2 1124 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 MAP3K21Q5TCX8 1036 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 C6orf89Q6UWU4 347 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 SND1Q7KZF4 910 aaKnown RBP eCLIP11.16□□□□□ -0.62
APTX-216ENST00000472896 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.16□□□□□ -0.62
APTX-216ENST00000472896 CD302Q8IX05 232 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 CAGE1Q8TC20 777 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 CPLX3Q8WVH0 158 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 RSRC1Q96IZ7 334 aaKnown RBP11.16□□□□□ -0.62
APTX-216ENST00000472896 SH3GL3Q99963 347 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 COPRSQ9NQ92 184 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 LIMA1Q9UHB6 759 aaKnown RBP11.16□□□□□ -0.62
APTX-216ENST00000472896 EPN1Q9Y6I3 576 aaPredicted RBP11.16□□□□□ -0.62
APTX-216ENST00000472896 FPGT-TNNI3KV9GXZ4 949 aa11.16□□□□□ -0.62
APTX-216ENST00000472896 PLXNB2O15031 1838 aa11.15□□□□□ -0.62
APTX-216ENST00000472896 SYNRGQ9UMZ2 1314 aa11.15□□□□□ -0.62
APTX-216ENST00000472896 LRRC10BA6NIK2 292 aa11.15□□□□□ -0.62
APTX-216ENST00000472896 LSP1P33241 339 aa11.15□□□□□ -0.62
APTX-216ENST00000472896 PTGISQ16647 500 aa11.15□□□□□ -0.62
APTX-216ENST00000472896 ZMYM1Q5SVZ6 1142 aa11.15□□□□□ -0.62
APTX-216ENST00000472896 RNF187Q5TA31 235 aaPredicted RBP11.15□□□□□ -0.62
APTX-216ENST00000472896 FAM109BQ6ICB4 259 aaPredicted RBP11.15□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms