RNA–Protein interactions for RNA: ENST00000472807.1

CHEK2-223, Transcript of checkpoint kinase 2, humanhuman

TSL 2

Gene CHEK2, Length 514 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK2-223ENST00000472807 COL9A3Q14050 684 aaPredicted RBP10.26□□□□□ -0.77
CHEK2-223ENST00000472807 KRT32Q14532 448 aa10.26□□□□□ -0.77
CHEK2-223ENST00000472807 APOA5Q6Q788 366 aa10.26□□□□□ -0.77
CHEK2-223ENST00000472807 CYFIP1Q7L576 1253 aa10.26□□□□□ -0.77
CHEK2-223ENST00000472807 HEATR3Q7Z4Q2 680 aa10.26□□□□□ -0.77
CHEK2-223ENST00000472807 NLRX1Q86UT6 975 aa10.26□□□□□ -0.77
CHEK2-223ENST00000472807 SGMS1Q86VZ5 419 aa10.26□□□□□ -0.77
CHEK2-223ENST00000472807 CCDC82Q8N4S0 544 aa10.26□□□□□ -0.77
CHEK2-223ENST00000472807 FANCBQ8NB91 859 aa10.26□□□□□ -0.77
CHEK2-223ENST00000472807 PHOSPHO2Q8TCD6 241 aa10.26□□□□□ -0.77
CHEK2-223ENST00000472807 DHX38Q92620 1227 aaKnown RBP10.26□□□□□ -0.77
CHEK2-223ENST00000472807 CDHR1Q96JP9 859 aa10.26□□□□□ -0.77
CHEK2-223ENST00000472807 NEK1Q96PY6 1258 aa10.26□□□□□ -0.77
CHEK2-223ENST00000472807 RBM28Q9NW13 759 aaKnown RBP10.26□□□□□ -0.77
CHEK2-223ENST00000472807 RTEL1Q9NZ71 1219 aa10.26□□□□□ -0.77
CHEK2-223ENST00000472807 hCG_1642624A0A1W2PR95 340 aa10.25□□□□□ -0.77
CHEK2-223ENST00000472807 C17orf102A2RUQ5 167 aa10.25□□□□□ -0.77
CHEK2-223ENST00000472807 SPDYE3A6NKU9 549 aa10.25□□□□□ -0.77
CHEK2-223ENST00000472807 KIF28PB7ZC32 967 aa10.25□□□□□ -0.77
CHEK2-223ENST00000472807 H3BRB1 525 aa10.25□□□□□ -0.77
CHEK2-223ENST00000472807 CA3P07451 260 aa10.25□□□□□ -0.77
CHEK2-223ENST00000472807 MYOGP15173 224 aa10.25□□□□□ -0.77
CHEK2-223ENST00000472807 CNKSR3Q6P9H4 555 aa10.25□□□□□ -0.77
CHEK2-223ENST00000472807 HERC6Q8IVU3 1022 aa10.25□□□□□ -0.77
CHEK2-223ENST00000472807 GIMAP8Q8ND71 665 aaPredicted RBP10.25□□□□□ -0.77
CHEK2-223ENST00000472807 SENP7Q9BQF6 1050 aa10.25□□□□□ -0.77
CHEK2-223ENST00000472807 C16orf70Q9BSU1 422 aa10.25□□□□□ -0.77
CHEK2-223ENST00000472807 USP26Q9BXU7 913 aa10.25□□□□□ -0.77
CHEK2-223ENST00000472807 TUT1Q9H6E5 874 aaKnown RBP10.25□□□□□ -0.77
CHEK2-223ENST00000472807 EHMT1Q9H9B1 1298 aa10.25□□□□□ -0.77
CHEK2-223ENST00000472807 ZNF215Q9UL58 517 aaPredicted RBP10.25□□□□□ -0.77
CHEK2-223ENST00000472807 EMSYQ7Z589 1322 aa10.25□□□□□ -0.77
CHEK2-223ENST00000472807 DOCK5Q9H7D0 1870 aa10.25□□□□□ -0.77
CHEK2-223ENST00000472807 NCOR1O75376 2440 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 C19orf67A6NJJ6 358 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 ZBTB43O43298 467 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 EFCAB14O75071 495 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 CXCL10P02778 98 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 HMGB1P09429 215 aaKnown RBP10.24□□□□□ -0.77
CHEK2-223ENST00000472807 PRR29P0C7W0 189 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 SMIM10L2AP0DMW4 78 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 SMIM10L2BP0DMW5 78 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 GNAT1P11488 350 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 IGFBP4P22692 258 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 THPOP40225 353 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 WDR5P61964 334 aaKnown RBP10.24□□□□□ -0.77
CHEK2-223ENST00000472807 FGD1P98174 961 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 ZNF200P98182 395 aaPredicted RBP10.24□□□□□ -0.77
CHEK2-223ENST00000472807 SP4Q02446 784 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 SEMA3FQ13275 785 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 UBE2SQ16763 222 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 RTN1Q16799 776 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 ZNF618Q5T7W0 954 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 PPP1R18Q6NYC8 613 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 DHX32Q7L7V1 743 aaKnown RBP10.24□□□□□ -0.77
CHEK2-223ENST00000472807 SERINC5Q86VE9 423 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 USP38Q8NB14 1042 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 PPM1EQ8WY54 764 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 ATP6V0A1Q93050 837 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 GPRASP2Q96D09 838 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 CCDC136Q96JN2 1154 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 GPR20Q99678 358 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 COL25A1Q9BXS0 654 aaPredicted RBP10.24□□□□□ -0.77
CHEK2-223ENST00000472807 CNTNAP5Q8WYK1 1306 aa10.24□□□□□ -0.77
CHEK2-223ENST00000472807 KLF18A0A0U1RQI7 1052 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 ABHD14A-ACY1A0A1B0GW23 586 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 GOLGA8AA7E2F4 631 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 GOLGA8BA8MQT2 603 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 hCG_1984214I3L0E3 225 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 TLL1O43897 1013 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 NBNO60934 754 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 CAND2O75155 1236 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 HOXC8P31273 242 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 RCAN1P53805 252 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 NAPAP54920 295 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 EXOSC10Q01780 885 aaKnown RBP10.23□□□□□ -0.77
CHEK2-223ENST00000472807 MTMR1Q13613 665 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 IKBKEQ14164 716 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 ADGRE1Q14246 886 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 TRIM71Q2Q1W2 868 aaKnown RBP10.23□□□□□ -0.77
CHEK2-223ENST00000472807 TSGA10IPQ3SY00 556 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 WWC2Q6AWC2 1192 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 TRIM50Q86XT4 487 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 TEX2Q8IWB9 1127 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 RASEFQ8IZ41 740 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 ZNF713Q8N859 430 aaPredicted RBP10.23□□□□□ -0.77
CHEK2-223ENST00000472807 WNT8BQ93098 351 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 TCEANC2Q96MN5 208 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 ZBED2Q9BTP6 218 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 BCAS3Q9H6U6 928 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 NAP1L2Q9ULW6 460 aaPredicted RBP10.23□□□□□ -0.77
CHEK2-223ENST00000472807 KAT6AQ92794 2004 aa10.23□□□□□ -0.77
CHEK2-223ENST00000472807 BDP1A6H8Y1 2624 aa10.22□□□□□ -0.77
CHEK2-223ENST00000472807 PRRC2BQ5JSZ5 2229 aaKnown RBP10.22□□□□□ -0.77
CHEK2-223ENST00000472807 RSPH10B2B2RC85 870 aa10.22□□□□□ -0.77
CHEK2-223ENST00000472807 GTPBP6O43824 516 aaPredicted RBP10.22□□□□□ -0.77
CHEK2-223ENST00000472807 LGR5O75473 907 aa10.22□□□□□ -0.77
CHEK2-223ENST00000472807 RSPH10BP0C881 870 aa10.22□□□□□ -0.77
CHEK2-223ENST00000472807 ITGB5P18084 799 aa10.22□□□□□ -0.77
CHEK2-223ENST00000472807 TCF7P36402 384 aaPredicted RBP10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 102.5 ms