RNA–Protein interactions for RNA: ENST00000472103.5

SMARCD3-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 5

Gene SMARCD3, Length 798 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-207ENST00000472103 PDIA4P13667 645 aaKnown RBP16.59■□□□□ 0.25
SMARCD3-207ENST00000472103 BEX3Q00994 111 aa16.59■□□□□ 0.25
SMARCD3-207ENST00000472103 SP4Q02446 784 aa16.59■□□□□ 0.25
SMARCD3-207ENST00000472103 DHX37Q8IY37 1157 aaKnown RBP16.59■□□□□ 0.25
SMARCD3-207ENST00000472103 OR6J1Q8NGC5 347 aa16.59■□□□□ 0.25
SMARCD3-207ENST00000472103 CDHR1Q96JP9 859 aa16.59■□□□□ 0.25
SMARCD3-207ENST00000472103 NAP1L4Q99733 375 aaKnown RBP16.59■□□□□ 0.25
SMARCD3-207ENST00000472103 SENP7Q9BQF6 1050 aa16.59■□□□□ 0.25
SMARCD3-207ENST00000472103 UPF3AQ9H1J1 476 aaKnown RBP16.59■□□□□ 0.25
SMARCD3-207ENST00000472103 NKRFO15226 690 aaKnown RBP eCLIP16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 PSMD10O75832 226 aa16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 CCNE2O96020 404 aa16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 GJA9P57773 515 aa16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 NUCB2P80303 420 aa16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 CEBPZQ03701 1054 aaKnown RBP16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 PTGDRQ13258 359 aa16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 NEDD9Q14511 834 aa16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 PTPAQ15257 358 aa16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 SF3A1Q15459 793 aaKnown RBP16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 CALCRLQ16602 461 aa16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 HSDL1Q3SXM5 330 aa16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 AFG1LQ8WV93 481 aa16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 XPNPEP3Q9NQH7 507 aa16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 TFIP11Q9UBB9 837 aaKnown RBP16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 Q9Y3F1 56 aa16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 NFASCO94856 1347 aa16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 TCHHQ07283 1943 aa16.58■□□□□ 0.24
SMARCD3-207ENST00000472103 SGPL1O95470 568 aa16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 GJB1P08034 283 aa16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 OR52Z1P0C646 297 aa16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 MNX1P50219 401 aaPredicted RBP16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 NKX3-2P78367 333 aa16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 DNM1Q05193 864 aaKnown RBP16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 LRRC41Q15345 812 aa16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 IL17AQ16552 155 aa16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 METTL7BQ6UX53 244 aa16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 B3GNT9Q6UX72 402 aa16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 KLHDC9Q8NEP7 349 aa16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 U2AF1L4Q8WU68 220 aaKnown RBP16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 ABHD8Q96I13 439 aa16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 CRISPLD2Q9H0B8 497 aa16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 UNC45AQ9H3U1 944 aa16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 MLXIPQ9HAP2 919 aa16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 VAV3Q9UKW4 847 aa16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 OGDHLQ9ULD0 1010 aa16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 CIZ1Q9ULV3 898 aaPredicted RBP16.57■□□□□ 0.24
SMARCD3-207ENST00000472103 GSTTP1A0A1W2PQM5 241 aa16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 TBX3O15119 743 aa16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 MSCO60682 206 aa16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 MMP3P08254 477 aa16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 C6orf222P0C671 652 aaPredicted RBP16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 TXKP42681 527 aa16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 ATP2C1P98194 919 aaPredicted RBP16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 SPIRE1Q08AE8 756 aa16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 ORC2Q13416 577 aaPredicted RBP16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 LAMC2Q13753 1193 aa16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 LRCH2Q5VUJ6 765 aa16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 CCSAPQ6IQ19 270 aaPredicted RBP16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 EMID1Q96A84 441 aaPredicted RBP16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 FAM20AQ96MK3 541 aa16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 SPATA33Q96N06 139 aa16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 GPR20Q99678 358 aa16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 SDF4Q9BRK5 362 aa16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 TEKT3Q9BXF9 490 aa16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 CHMP5Q9NZZ3 219 aa16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 SLC9A2Q9UBY0 812 aa16.56■□□□□ 0.24
SMARCD3-207ENST00000472103 WDR81Q562E7 1941 aa16.55■□□□□ 0.24
SMARCD3-207ENST00000472103 EML1O00423 815 aa16.55■□□□□ 0.24
SMARCD3-207ENST00000472103 CHMP2AO43633 222 aa16.55■□□□□ 0.24
SMARCD3-207ENST00000472103 GAS7O60861 476 aa16.55■□□□□ 0.24
SMARCD3-207ENST00000472103 MYCNP04198 464 aaPredicted RBP16.55■□□□□ 0.24
SMARCD3-207ENST00000472103 GJA8P48165 433 aa16.55■□□□□ 0.24
SMARCD3-207ENST00000472103 ACTR2P61160 394 aa16.55■□□□□ 0.24
SMARCD3-207ENST00000472103 GRIN1Q05586 938 aa16.55■□□□□ 0.24
SMARCD3-207ENST00000472103 TNS4Q8IZW8 715 aa16.55■□□□□ 0.24
SMARCD3-207ENST00000472103 PCYT2Q99447 389 aa16.55■□□□□ 0.24
SMARCD3-207ENST00000472103 RIT2Q99578 217 aa16.55■□□□□ 0.24
SMARCD3-207ENST00000472103 AP5M1Q9H0R1 490 aa16.55■□□□□ 0.24
SMARCD3-207ENST00000472103 JPH1Q9HDC5 661 aaPredicted RBP16.55■□□□□ 0.24
SMARCD3-207ENST00000472103 TBC1D22BQ9NU19 505 aa16.55■□□□□ 0.24
SMARCD3-207ENST00000472103 CENPFP49454 3210 aa16.55■□□□□ 0.24
SMARCD3-207ENST00000472103 A6NJR5 290 aa16.54■□□□□ 0.24
SMARCD3-207ENST00000472103 CST5P28325 142 aaPredicted RBP16.54■□□□□ 0.24
SMARCD3-207ENST00000472103 NASPP49321 788 aaPredicted RBP16.54■□□□□ 0.24
SMARCD3-207ENST00000472103 FSCN1Q16658 493 aaKnown RBP16.54■□□□□ 0.24
SMARCD3-207ENST00000472103 GIMAP8Q8ND71 665 aaPredicted RBP16.54■□□□□ 0.24
SMARCD3-207ENST00000472103 PPTC7Q8NI37 304 aa16.54■□□□□ 0.24
SMARCD3-207ENST00000472103 TMEM106CQ9BVX2 250 aa16.54■□□□□ 0.24
SMARCD3-207ENST00000472103 TTC12Q9H892 705 aaPredicted RBP16.54■□□□□ 0.24
SMARCD3-207ENST00000472103 KIAA0100Q14667 2235 aaKnown RBP16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 ELP1O95163 1332 aa16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 POTEMA6NI47 508 aa16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 MARCH6O60337 910 aa16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 ATG7O95352 703 aa16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 BAG4O95429 457 aaKnown RBP16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 TFRCP02786 760 aaKnown RBP16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 HOXD8P13378 290 aaPredicted RBP16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 EN2P19622 333 aaPredicted RBP16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 MARCKSP29966 332 aaPredicted RBP16.53■□□□□ 0.24
SMARCD3-207ENST00000472103 TECP42680 631 aa16.53■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms