RNA–Protein interactions for RNA: ENST00000471635.5

RBM39-228, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-228ENST00000471635 Q8N1X5 172 aa6.15□□□□□ -1.42
RBM39-228ENST00000471635 TXNDC5Q8NBS9 432 aaKnown RBP6.15□□□□□ -1.42
RBM39-228ENST00000471635 AARSD1Q9BTE6 412 aaKnown RBP6.15□□□□□ -1.42
RBM39-228ENST00000471635 PHF20Q9BVI0 1012 aa6.15□□□□□ -1.42
RBM39-228ENST00000471635 GPR27Q9NS67 375 aa6.15□□□□□ -1.42
RBM39-228ENST00000471635 MROH6A6NGR9 719 aa6.14□□□□□ -1.43
RBM39-228ENST00000471635 PRODHO43272 600 aa6.14□□□□□ -1.43
RBM39-228ENST00000471635 FAM26FQ5R3K3 315 aa6.14□□□□□ -1.43
RBM39-228ENST00000471635 CRIP3Q6Q6R5 217 aa6.14□□□□□ -1.43
RBM39-228ENST00000471635 SGSM3Q96HU1 749 aa6.14□□□□□ -1.43
RBM39-228ENST00000471635 LOXL4Q96JB6 756 aa6.14□□□□□ -1.43
RBM39-228ENST00000471635 CDIP1Q9H305 208 aa6.14□□□□□ -1.43
RBM39-228ENST00000471635 SMOC1Q9H4F8 434 aa6.14□□□□□ -1.43
RBM39-228ENST00000471635 IQCA1LA6NCM1 817 aa6.13□□□□□ -1.43
RBM39-228ENST00000471635 KRIT1O00522 736 aa6.13□□□□□ -1.43
RBM39-228ENST00000471635 MAFKO60675 156 aa6.13□□□□□ -1.43
RBM39-228ENST00000471635 FZD7O75084 574 aa6.13□□□□□ -1.43
RBM39-228ENST00000471635 LRG1P02750 347 aa6.13□□□□□ -1.43
RBM39-228ENST00000471635 KIAA2012Q0VF49 1180 aa6.13□□□□□ -1.43
RBM39-228ENST00000471635 KCNT2Q6UVM3 1135 aa6.13□□□□□ -1.43
RBM39-228ENST00000471635 TMC5Q6UXY8 1006 aa6.13□□□□□ -1.43
RBM39-228ENST00000471635 PIP4K2CQ8TBX8 421 aa6.13□□□□□ -1.43
RBM39-228ENST00000471635 PHOSPHO1Q8TCT1 267 aa6.13□□□□□ -1.43
RBM39-228ENST00000471635 CLIC6Q96NY7 704 aa6.13□□□□□ -1.43
RBM39-228ENST00000471635 ARHGEF4Q9NR80 690 aa6.13□□□□□ -1.43
RBM39-228ENST00000471635 ASH2LQ9UBL3 628 aa6.13□□□□□ -1.43
RBM39-228ENST00000471635 CROTQ9UKG9 612 aa6.13□□□□□ -1.43
RBM39-228ENST00000471635 INVSQ9Y283 1065 aa6.13□□□□□ -1.43
RBM39-228ENST00000471635 BLACEA4D250 179 aa6.12□□□□□ -1.43
RBM39-228ENST00000471635 SLC27A2O14975 620 aa6.12□□□□□ -1.43
RBM39-228ENST00000471635 ZNF28P17035 718 aa6.12□□□□□ -1.43
RBM39-228ENST00000471635 GRIN1Q05586 938 aa6.12□□□□□ -1.43
RBM39-228ENST00000471635 BORAQ6PGQ7 559 aa6.12□□□□□ -1.43
RBM39-228ENST00000471635 FAM124AQ86V42 546 aa6.12□□□□□ -1.43
RBM39-228ENST00000471635 LGI4Q8N135 537 aa6.12□□□□□ -1.43
RBM39-228ENST00000471635 DVL3Q92997 716 aaPredicted RBP6.12□□□□□ -1.43
RBM39-228ENST00000471635 LCORQ96JN0 433 aaPredicted RBP6.12□□□□□ -1.43
RBM39-228ENST00000471635 TRIM55Q9BYV6 548 aa6.12□□□□□ -1.43
RBM39-228ENST00000471635 SLC6A20Q9NP91 592 aa6.12□□□□□ -1.43
RBM39-228ENST00000471635 RBPJLQ9UBG7 517 aa6.12□□□□□ -1.43
RBM39-228ENST00000471635 CYP1A1P04798 512 aaPredicted RBP6.11□□□□□ -1.43
RBM39-228ENST00000471635 FGFR1P11362 822 aa6.11□□□□□ -1.43
RBM39-228ENST00000471635 PABPC1P11940 636 aaKnown RBP6.11□□□□□ -1.43
RBM39-228ENST00000471635 GRK2P25098 689 aa6.11□□□□□ -1.43
RBM39-228ENST00000471635 IL13P35225 146 aa6.11□□□□□ -1.43
RBM39-228ENST00000471635 GRK3P35626 688 aa6.11□□□□□ -1.43
RBM39-228ENST00000471635 RAB33AQ14088 237 aa6.11□□□□□ -1.43
RBM39-228ENST00000471635 NTRK3Q16288 839 aa6.11□□□□□ -1.43
RBM39-228ENST00000471635 TBC1D10BQ4KMP7 808 aaPredicted RBP6.11□□□□□ -1.43
RBM39-228ENST00000471635 YOD1Q5VVQ6 348 aaPredicted RBP6.11□□□□□ -1.43
RBM39-228ENST00000471635 RSPO2Q6UXX9 243 aaPredicted RBP6.11□□□□□ -1.43
RBM39-228ENST00000471635 NSMFQ6X4W1 530 aa6.11□□□□□ -1.43
RBM39-228ENST00000471635 RBM12BQ8IXT5 1001 aaKnown RBP6.11□□□□□ -1.43
RBM39-228ENST00000471635 ST13P5Q8NFI4 369 aaPredicted RBP6.11□□□□□ -1.43
RBM39-228ENST00000471635 DCAF4Q8WV16 495 aa6.11□□□□□ -1.43
RBM39-228ENST00000471635 OSBP2Q969R2 916 aa6.11□□□□□ -1.43
RBM39-228ENST00000471635 KCNJ15Q99712 375 aa6.11□□□□□ -1.43
RBM39-228ENST00000471635 L2HGDHQ9H9P8 463 aa6.11□□□□□ -1.43
RBM39-228ENST00000471635 WASF3Q9UPY6 502 aa6.11□□□□□ -1.43
RBM39-228ENST00000471635 ZNF536O15090 1300 aa6.1□□□□□ -1.43
RBM39-228ENST00000471635 TRAV20A0A0B4J274 112 aa6.1□□□□□ -1.43
RBM39-228ENST00000471635 STK10O94804 968 aaKnown RBP6.1□□□□□ -1.43
RBM39-228ENST00000471635 PLATP00750 562 aa6.1□□□□□ -1.43
RBM39-228ENST00000471635 COL6A2P12110 1019 aa6.1□□□□□ -1.43
RBM39-228ENST00000471635 MLLT6P55198 1093 aaPredicted RBP6.1□□□□□ -1.43
RBM39-228ENST00000471635 LBX2Q6XYB7 198 aa6.1□□□□□ -1.43
RBM39-228ENST00000471635 OTOP3Q7RTS5 596 aa6.1□□□□□ -1.43
RBM39-228ENST00000471635 TRIM48Q8IWZ4 208 aa6.1□□□□□ -1.43
RBM39-228ENST00000471635 LRRC47Q8N1G4 583 aaKnown RBP6.1□□□□□ -1.43
RBM39-228ENST00000471635 TMEM209Q96SK2 561 aa6.1□□□□□ -1.43
RBM39-228ENST00000471635 PCED1AQ9H1Q7 454 aa6.1□□□□□ -1.43
RBM39-228ENST00000471635 IGSF5Q9NSI5 407 aa6.1□□□□□ -1.43
RBM39-228ENST00000471635 LTFP02788 710 aa6.09□□□□□ -1.43
RBM39-228ENST00000471635 GNAT1P11488 350 aa6.09□□□□□ -1.43
RBM39-228ENST00000471635 IFRD2Q12894 506 aaPredicted RBP6.09□□□□□ -1.43
RBM39-228ENST00000471635 KIZQ2M2Z5 673 aa6.09□□□□□ -1.43
RBM39-228ENST00000471635 PHF19Q5T6S3 580 aa6.09□□□□□ -1.43
RBM39-228ENST00000471635 CYP4F22Q6NT55 531 aa6.09□□□□□ -1.43
RBM39-228ENST00000471635 TRMT10BQ6PF06 316 aaKnown RBP6.09□□□□□ -1.43
RBM39-228ENST00000471635 CLEC4DQ8WXI8 215 aa6.09□□□□□ -1.43
RBM39-228ENST00000471635 ZCCHC14Q8WYQ9 949 aaKnown RBP6.09□□□□□ -1.43
RBM39-228ENST00000471635 TMEM168Q9H0V1 697 aa6.09□□□□□ -1.43
RBM39-228ENST00000471635 C9orf118A6NHY6 69 aa6.08□□□□□ -1.44
RBM39-228ENST00000471635 B4GALT3O60512 393 aa6.08□□□□□ -1.44
RBM39-228ENST00000471635 CYP7B1O75881 506 aa6.08□□□□□ -1.44
RBM39-228ENST00000471635 GPR85P60893 370 aa6.08□□□□□ -1.44
RBM39-228ENST00000471635 TUSC3Q13454 348 aa6.08□□□□□ -1.44
RBM39-228ENST00000471635 VASNQ6EMK4 673 aa6.08□□□□□ -1.44
RBM39-228ENST00000471635 SPRED1Q7Z699 444 aa6.08□□□□□ -1.44
RBM39-228ENST00000471635 PROSER1Q86XN7 944 aa6.08□□□□□ -1.44
RBM39-228ENST00000471635 CKAP2LQ8IYA6 745 aa6.08□□□□□ -1.44
RBM39-228ENST00000471635 IFNL3Q8IZI9 196 aa6.08□□□□□ -1.44
RBM39-228ENST00000471635 CHST13Q8NET6 341 aa6.08□□□□□ -1.44
RBM39-228ENST00000471635 TTLL11Q8NHH1 800 aa6.08□□□□□ -1.44
RBM39-228ENST00000471635 SH3RF3Q8TEJ3 882 aaPredicted RBP6.08□□□□□ -1.44
RBM39-228ENST00000471635 YTHDC1Q96MU7 727 aaKnown RBP6.08□□□□□ -1.44
RBM39-228ENST00000471635 WRNIP1Q96S55 665 aa6.08□□□□□ -1.44
RBM39-228ENST00000471635 ZFYVE21Q9BQ24 234 aa6.08□□□□□ -1.44
RBM39-228ENST00000471635 PPP1R1BQ9UD71 204 aaPredicted RBP6.08□□□□□ -1.44
RBM39-228ENST00000471635 ASXL2Q76L83 1435 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms